FFCP PHASE1:Hg19::chr17:40264184..40264230,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79132|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=29517|TSSclassifier=S|UniProt=C9JG98|association_with_transcript=62bp_to_ENST00000413196_5end|coexpression_cluster_id=C0|description=CAGE_peak_2_at_DHX58_5end|id=chr17:40264184..40264230,-|ontology_enrichment_celltype=CL:0002009!6.89e-16!65;CL:0002194!4.72e-15!63;CL:0000576!4.72e-15!63;CL:0000040!4.72e-15!63;CL:0000559!4.72e-15!63;CL:0000766!7.18e-15!76;CL:0000557!7.86e-15!71;CL:0000839!1.39e-13!70;CL:0002057!9.96e-12!42;CL:0000860!3.52e-10!45;CL:0000763!2.24e-08!112;CL:0000049!2.24e-08!112;CL:0000738!4.38e-07!140|ontology_enrichment_celltype_v019=CL:0000860;1.97e-23;33!CL:0002057;1.97e-23;33!CL:0000473;5.25e-19;39!CL:0000234;5.25e-19;39!CL:0000576;3.23e-15;48!CL:0000766;7.25e-10;69!CL:0000771;9.00e-08;2!CL:0000763;1.35e-07;100!CL:0000453;4.10e-07;5|ontology_enrichment_celltype_v019_2=CL:0000473,3.26e-26,48;CL:0000234,3.26e-26,48;CL:0000860,8.17e-25,42;CL:0002057,8.17e-25,42;CL:0000766,1.16e-22,72;CL:0002194,5.97e-22,59;CL:0000576,5.97e-22,59;CL:0000040,5.97e-22,59;CL:0000559,5.97e-22,59;CL:0002009,4.68e-21,61;CL:0000839,6.21e-21,66;CL:0000557,1.55e-20,67;CL:0000763,2.11e-17,108;CL:0000049,2.11e-17,108;CL:0000738,1.65e-13,136;CL:0000988,1.89e-11,177;CL:0000037,1.27e-09,168;CL:0002032,1.88e-09,161;CL:0000837,1.88e-09,161;CL:0002031,4.79e-09,120;CL:0002087,1.02e-08,115;CL:0000771,8.15e-08,2;CL:0000453,4.15e-07,5|ontology_enrichment_development_v019=CL:0002057;2.21e-16;42|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!7.32e-14!112;UBERON:0002390!1.43e-13!102;UBERON:0003061!1.43e-13!102;UBERON:0002371!1.79e-12!80;UBERON:0001474!1.61e-11!86;UBERON:0004765!4.79e-11!101;UBERON:0001434!4.79e-11!101;UBERON:0002405!1.76e-09!115;UBERON:0002204!8.42e-07!167|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.29e-18,98;UBERON:0003061,7.29e-18,98;UBERON:0002371,1.92e-17,76;UBERON:0001474,9.32e-16,82;UBERON:0002193,1.34e-15,108;UBERON:0004765,7.30e-14,90;UBERON:0002405,3.08e-13,93;UBERON:0001434,3.65e-13,100;UBERON:0002204,1.29e-09,167;UBERON:0003081,3.73e-08,203|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.0787107813136792,0,0.767658796194425,0,0,0,0,0,0,0.293600439334847,1.10799081706375,0.601633342410425,0.651032612147555,0.895661896959697,1.29557466407592,0.77272670290256,0,0,0,0.697287110717054,0,0,2.3015391385772,2.81776777182011,1.89185783910868,0.344745680736619,0.645484683583826,0,0,0,0.224723484445085,12.549439587207,2.88836124368484,9.59005688698562,5.27762080298746,1.19678194572979,3.40979800426155,58.0418477257168,34.6104987061595,39.2378016867212,1.00499466102697,1.0429658368404,0.868755378820466,85.9667293739384,53.0319795822093,78.7991344727802,1.05627643155971,0.425208599930087,0,0.786300418025466,0.450530678524519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0.270803863765016,0.128091319725675,0,0.164437904603676,0,0.289803085735052,0,0.267540828089713,0,0,0,0.34362744548263,0.253019692019503,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0.722878304769133,0,0.144846518960824,0,0,0,0,0,1.37528029272598,0,0,0.324547393654683,0.174129737299267,0.664789802594326,0,1.14398982156026,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0.805658634218294,0,0,0,0,0,0,0.112611480483322,0,0,0,1.31780417436063,7.75560528296651,0,0,0,0.132409180813219,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,5.94001428641027,1.97813543422845,0,0,0,0,0,0,0,1.20190447125277,0,0,0.213557388818567,0,0.300091096084402,0.103052529238439,0.257640540045629,0.37223371266318,0,0,0.252433774244115,0.0920498986422993,0,0,0.201504196455281,0,0.386521706326594,0,0.286804595389004,0,0,0,0.10366105501537,0,0,3.12899064659632,2.57296375277154,0,0,0,0.236613600079688,0,0,0.55146986366197,0.217879444092406,0,0.539325232640658,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0.590789906681404,0,0.368965315629341,0,0,0,0,0.185176890317059,0.651616610620649,0,0,0,0.117408694235822,0.577465791044295,0.925971025153221,0,0,0,0.246217006087397,0.468008530278475,0.297262324577456,0,0.16798212819886,0.567100388969546,0,0,0,0,0,0,1.00883967391873,0.25248486685276,0.190493682876507,3.05590740446622,4.68869788840188,0,0.411309970813294,0.600686115687835,4.57322292208925,0,0,0,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,2.43247561282381,0.502257091432126,2.10833939483032,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.260650843404249,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,1.55776328755086,0.232420756919918,0,0.200506470303285,0,0.34444334449382,0.182091168006717,0.786746489756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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79132 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29517 | |||
|TSSclassifier=S | |||
|UniProt=C9JG98 | |||
|association_with_transcript=62bp_to_ENST00000413196_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_2_at_DHX58_5end | |||
|id=chr17:40264184..40264230,- | |||
|ontology_enrichment_celltype=CL:0002009!6.89e-16!65;CL:0002194!4.72e-15!63;CL:0000576!4.72e-15!63;CL:0000040!4.72e-15!63;CL:0000559!4.72e-15!63;CL:0000766!7.18e-15!76;CL:0000557!7.86e-15!71;CL:0000839!1.39e-13!70;CL:0002057!9.96e-12!42;CL:0000860!3.52e-10!45;CL:0000763!2.24e-08!112;CL:0000049!2.24e-08!112;CL:0000738!4.38e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.97e-23;33!CL:0002057;1.97e-23;33!CL:0000473;5.25e-19;39!CL:0000234;5.25e-19;39!CL:0000576;3.23e-15;48!CL:0000766;7.25e-10;69!CL:0000771;9.00e-08;2!CL:0000763;1.35e-07;100!CL:0000453;4.10e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,3.26e-26,48;CL:0000234,3.26e-26,48;CL:0000860,8.17e-25,42;CL:0002057,8.17e-25,42;CL:0000766,1.16e-22,72;CL:0002194,5.97e-22,59;CL:0000576,5.97e-22,59;CL:0000040,5.97e-22,59;CL:0000559,5.97e-22,59;CL:0002009,4.68e-21,61;CL:0000839,6.21e-21,66;CL:0000557,1.55e-20,67;CL:0000763,2.11e-17,108;CL:0000049,2.11e-17,108;CL:0000738,1.65e-13,136;CL:0000988,1.89e-11,177;CL:0000037,1.27e-09,168;CL:0002032,1.88e-09,161;CL:0000837,1.88e-09,161;CL:0002031,4.79e-09,120;CL:0002087,1.02e-08,115;CL:0000771,8.15e-08,2;CL:0000453,4.15e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.21e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!7.32e-14!112;UBERON:0002390!1.43e-13!102;UBERON:0003061!1.43e-13!102;UBERON:0002371!1.79e-12!80;UBERON:0001474!1.61e-11!86;UBERON:0004765!4.79e-11!101;UBERON:0001434!4.79e-11!101;UBERON:0002405!1.76e-09!115;UBERON:0002204!8.42e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,7.29e-18,98;UBERON:0003061,7.29e-18,98;UBERON:0002371,1.92e-17,76;UBERON:0001474,9.32e-16,82;UBERON:0002193,1.34e-15,108;UBERON:0004765,7.30e-14,90;UBERON:0002405,3.08e-13,93;UBERON:0001434,3.65e-13,100;UBERON:0002204,1.29e-09,167;UBERON:0003081,3.73e-08,203 | |||
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| |||
|short_description=p2@DHX58 | |||
}} |
Revision as of 13:41, 11 September 2013
Short description: | p2@DHX58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_DHX58_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 62bp_to_ENST00000413196_5end |
EntrezGene: | DHX58 |
HGNC: | 29517 |
UniProt: | C9JG98 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 3.26e-26 | 48 |
phagocyte | 3.26e-26 | 48 |
classical monocyte | 8.17e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.17e-25 | 42 |
myeloid leukocyte | 1.16e-22 | 72 |
monopoietic cell | 5.97e-22 | 59 |
monocyte | 5.97e-22 | 59 |
monoblast | 5.97e-22 | 59 |
promonocyte | 5.97e-22 | 59 |
macrophage dendritic cell progenitor | 4.68e-21 | 61 |
myeloid lineage restricted progenitor cell | 6.21e-21 | 66 |
granulocyte monocyte progenitor cell | 1.55e-20 | 67 |
myeloid cell | 2.11e-17 | 108 |
common myeloid progenitor | 2.11e-17 | 108 |
leukocyte | 1.65e-13 | 136 |
hematopoietic cell | 1.89e-11 | 177 |
hematopoietic stem cell | 1.27e-09 | 168 |
hematopoietic oligopotent progenitor cell | 1.88e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.88e-09 | 161 |
hematopoietic lineage restricted progenitor cell | 4.79e-09 | 120 |
nongranular leukocyte | 1.02e-08 | 115 |
eosinophil | 8.15e-08 | 2 |
Langerhans cell | 4.15e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 7.29e-18 | 98 |
blood island | 7.29e-18 | 98 |
bone marrow | 1.92e-17 | 76 |
bone element | 9.32e-16 | 82 |
hemolymphoid system | 1.34e-15 | 108 |
skeletal element | 7.30e-14 | 90 |
immune system | 3.08e-13 | 93 |
skeletal system | 3.65e-13 | 100 |
musculoskeletal system | 1.29e-09 | 167 |
lateral plate mesoderm | 3.73e-08 | 203 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.