FFCP PHASE1:Hg19::chr16:82660635..82660650,+: Difference between revisions
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{{FFCP | 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.97112225632812,31.2420674423533,0,0,5.96547505663907,0.942693539496011,0,12.7842220871329,0,9.07728206985395,2.07281978112303,0,0,2.60787408453869,8.81882501203278,124.536914661985,148.525075071736,76.7298224613642,1.72090943528111,183.532933133107,207.40942718379,3.81048345171836,7.3314197934096,40.3268301363616,18.1552398405712,3.02009665854039,0,0,29.1342976734553,31.9281329322928,18.5570309014112,23.7998386598978,0,0,0,0,0,1.20770274853339,1.92935395269862,6.33822725461476,0.470317296361523,7.10930133086326,0,2.94462700672418,2.97046400327086,8.0304588240846,65.4219391548095,0.751871343838829,2.96506284678455,0,0.178553938605658,8.4694769211766,0,1.46067277649303,3.21110498383179,0.860037498908708,0,21.8932598414745,10.9087672585094,8.46442944824641,15.2517957448368,26.3440108319908,14.276676550085,0.883164973845552,0,0.380095503034311,9.99490531471421,3.47382626845229,21.5953013906886,0.250707539292375,9.77545207015288,0.535928260312357,5.80418607621146,1.96522692137601,41.7938604525923,16.1883813395343,0.387533459016037,2.73128742901775,27.8087019199921,1.97306190662311,6.46775004666302,38.1004308819682,50.9927618617069,5.65757245322535,5.30744319905805,16.3003574707547,16.4434602594168,21.1320144837877,7.7228912914776,0,25.81050366438,60.5095148705189,18.3103280242082,9.98635161278269,8.25222553723207,0|short_description=p2@CDH13}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=1012 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1753 | |||
|TSSclassifier=S | |||
|UniProt=P55290 | |||
|association_with_transcript=-12bp_to_ENST00000268613_5end | |||
|coexpression_cluster_id=C3592 | |||
|description=CAGE_peak_2_at_CDH13_5end | |||
|id=chr16:82660635..82660650,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.75e-21!180;CL:0000220!4.25e-16!246;CL:0000222!4.68e-16!119;CL:0002321!9.51e-16!248;CL:0000057!1.67e-12!75;CL:0000680!6.77e-11!57;CL:0000056!6.77e-11!57;CL:0000355!6.77e-11!57;CL:0000187!6.00e-10!54;CL:0000183!1.20e-09!59;CL:0000192!5.64e-09!42;CL:0000514!5.64e-09!42;CL:0000359!1.03e-08!32;CL:0000393!1.05e-08!60;CL:0000211!1.05e-08!60;CL:0002139!2.26e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.44e-08;24!CL:0000359;1.91e-08;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.25e-16,121;CL:0002321,6.96e-15,250;CL:0000057,1.62e-13,76;CL:0000680,4.90e-11,58;CL:0000056,4.90e-11,58;CL:0000355,4.90e-11,58;CL:0000187,4.55e-10,55;CL:0000192,4.76e-09,43;CL:0000514,4.76e-09,43;CL:0000359,6.51e-09,32;CL:0002139,1.46e-08,24;CL:0000393,2.65e-08,61;CL:0000211,2.65e-08,61 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.47e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;2.17e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.42e-07,14 | |||
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| |||
|short_description=p2@CDH13 | |||
}} |
Revision as of 11:46, 11 September 2013
Short description: | p2@CDH13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_CDH13_5end |
Coexpression cluster: | C3592_Fibroblast_schwannoma_basal_salivary_mesenchymal_large_Multipotent |
Association with transcript: | -12bp_to_ENST00000268613_5end |
EntrezGene: | CDH13 |
HGNC: | 1753 |
UniProt: | P55290 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.25e-16 | 121 |
embryonic cell | 6.96e-15 | 250 |
fibroblast | 1.62e-13 | 76 |
muscle precursor cell | 4.90e-11 | 58 |
myoblast | 4.90e-11 | 58 |
multi-potent skeletal muscle stem cell | 4.90e-11 | 58 |
muscle cell | 4.55e-10 | 55 |
smooth muscle cell | 4.76e-09 | 43 |
smooth muscle myoblast | 4.76e-09 | 43 |
vascular associated smooth muscle cell | 6.51e-09 | 32 |
endothelial cell of vascular tree | 1.46e-08 | 24 |
electrically responsive cell | 2.65e-08 | 61 |
electrically active cell | 2.65e-08 | 61 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.42e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.