FFCP PHASE1:Hg19::chr16:67313412..67313464,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25894|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24501|TSSclassifier=S|UniProt=Q58EX7|association_with_transcript=-24bp_to_ENST00000379344,NM_001129729,uc002ess.3_5end|description=CAGE_peak_1_at_PLEKHG4_5end|id=chr16:67313412..67313464,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!1.33e-10!239;DOID:162!2.80e-10!235;DOID:1240!3.14e-08!39;DOID:8692!2.07e-07!31;DOID:0050687!3.81e-07!143;DOID:305!7.79e-07!106;DOID:0050686!7.91e-07!137|ontology_enrichment_disease_v019=DOID:8692;1.72e-07;31|ontology_enrichment_disease_v019_2=DOID:14566,2.92e-11,239;DOID:162,4.17e-11,235;DOID:1240,1.37e-08,39;DOID:0050687,1.05e-07,143;DOID:8692,1.34e-07,31;DOID:305,2.74e-07,106;DOID:0050686,3.48e-07,137|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0.181678379270557,0.214100523890983,0.281908808191942,1.0007329835313,0,0,2.53299878168311,0,2.87304191019822,1.47440361900905,3.48900583986214,5.02415155899396,5.80287352102598,4.33182235360163,4.97096063591874,0,0,0,0,2.46242116153576,5.10001728110633,4.07491137921514,0.85870796139317,0.821246550437305,1.25542639594803,0.0764134057479513,0.0821005894499457,0,1.18009283054671,0.383829398097213,1.08371286321253,6.43594857135249,2.10844143144775,3.69754010166788,0.619737604642413,1.42169232487422,4.69760702935756,0.553995408531877,0.200544447470142,0.868043482863407,0.223915474239924,0,0.257575567634187,0.290796477559129,0.377875943688809,0.242584061187816,0,0,0,0.28769239232215,0,0,0.344745680736619,0.645484683583826,0,0,0,0.224723484445085,0.306083892370903,0,0,0.329851300186716,0,0.426224750532694,0,0,0,0,0,0.65156653411535,0.605399502633369,0,0,1.26753171787165,0.637812899895131,0.209658645508376,0.786300418025466,0.750884464207532,0.964353520182481,0.570025487482497,0.19891667719909,0.730656615058536,1.75996244461323,0,0,0,0.400395987036012,0,0,0.954053754535364,1.1384259382189,0,0.382273228125229,6.60856642895129,1.12101712596307,2.89722493252585,4.13090517239049,3.14408610199332,5.14003747498773,3.8452893939856,9.45174573237412,5.6813736688168,11.6896037044747,2.22820913770347,5.59751224202191,5.09527957542329,2.43723477388514,2.43373507478783,3.25148368899696,6.08420247033602,5.80335037350282,5.21645554323094,10.2317728581822,11.2367147797679,9.40819714244791,2.26618685395132,5.3650869104269,3.4362744548263,3.28925599625354,2.86708872891687,3.90650072313851,3.8018081777935,7.82990619204418,5.11946444617674,6.24653632761729,4.2619905367923,5.74789597844733,5.04016858061831,2.67440195783507,4.77920532813237,0,0.670700859703636,0.383587685530591,4.3372698286148,2.50668955317945,4.34539556882471,0,1.45990461090791,3.30871860074237,2.21729397462564,2.72287835648691,7.72776545436505,2.5500670180478,1.85392221392215,0.324547393654683,0.696518949197069,0.664789802594326,3.33886874027479,2.28797964312051,1.11437250398869,0.39752481473341,0.860234595106124,1.73570250803797,0,0.838998872419812,1.10047216776027,0.835979866147242,1.55050055501597,2.13459757612026,1.33888245105868,2.41697590265488,3.04108842287405,3.1728067481262,0,2.43042584364528,1.87529429396568,3.59246996201872,1.35133776579987,0,1.89853131913626,1.28241220751285,0,0,3.92484646928281,1.98788780678127,0.12663051166458,2.25095607382472,1.72101972449288,1.41867352879343,1.12135520028461,0,0.74000264525148,0,0.538842688278752,0,1.51357427644931,1.15235184896,9.60717870518566,1.87296046098192,2.85235910772225,2.39117888882882,2.46612447151906,2.5899671098901,1.96631129383148,1.83738754129404,3.0708579327942,5.26961483996404,5.94001428641027,5.19260551484969,0.910161361938026,4.31170885089743,3.03005005117319,1.00094815897571,1.6623846929051,3.95079858792754,2.75839016219118,4.5071417671979,0.113432183160021,4.30535125653269,3.20336083227851,1.90738711043606,5.40163972951924,2.67936576019941,6.95629458123199,2.23340227597908,4.55696097051419,2.24105111870757,6.56327813034698,2.85354685791128,5.17267381820198,2.4850671476163,0.604512589365842,2.37384829234683,0.193260853163297,1.90922284413584,0.573609190778008,12.1973706129595,7.68672656264614,9.06312754382243,9.74413917144482,6.56034212276634,2.91981887260664,0,1.92972281457866,1.38134921352481,6.50115099244771,7.21879481669586,3.31259040111563,3.87744787179634,6.26628677697053,4.30146493656336,5.88274499049497,5.93176547777742,4.04493924480493,3.13954344200554,5.00171304030308,2.21446636387394,1.40241773803446,1.2347220339942,4.41026134156626,0,0,0.590789906681404,7.94633578946371,18.448265781467,0.171567810298526,1.09750285408626,3.37205259772859,4.62433273093502,5.27754137403619,9.12263254868909,1.03993478527958,0,1.97081688457631,0.469634776943287,2.59859605969933,3.24089858803628,3.23432058798817,4.74122638775565,1.71697232418975,0,0.234004265139238,0.297262324577456,0,0.335964256397719,0.42532529172715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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24501 | |||
|TSSclassifier=S | |||
|UniProt=Q58EX7 | |||
|association_with_transcript=-24bp_to_ENST00000379344,NM_001129729,uc002ess.3_5end | |||
|description=CAGE_peak_1_at_PLEKHG4_5end | |||
|id=chr16:67313412..67313464,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.33e-10!239;DOID:162!2.80e-10!235;DOID:1240!3.14e-08!39;DOID:8692!2.07e-07!31;DOID:0050687!3.81e-07!143;DOID:305!7.79e-07!106;DOID:0050686!7.91e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.72e-07;31 | |||
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|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p1@PLEKHG4 | |||
}} |
Revision as of 11:10, 11 September 2013
Short description: | p1@PLEKHG4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PLEKHG4_5end |
Coexpression cluster: | NA |
Association with transcript: | -24bp_to_ENST00000379344, NM_001129729, uc002ess.3_5end |
EntrezGene: | PLEKHG4 |
HGNC: | 24501 |
UniProt: | Q58EX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 2.92e-11 | 239 |
cancer | 4.17e-11 | 235 |
leukemia | 1.37e-08 | 39 |
cell type cancer | 1.05e-07 | 143 |
myeloid leukemia | 1.34e-07 | 31 |
carcinoma | 2.74e-07 | 106 |
organ system cancer | 3.48e-07 | 137 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.