FFCP PHASE1:Hg19::chr16:56642041..56642084,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4502|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7406|TSSclassifier=W|UniProt=P02795|association_with_transcript=-26bp_to_ENST00000245185_5end|description=CAGE_peak_2_at_MT2A_5end|id=chr16:56642041..56642084,+|ontology_enrichment_celltype=CL:0000220!3.69e-10!246;CL:0000066!4.99e-10!254;CL:0002321!8.47e-10!248;CL:0002368!5.43e-08!13|ontology_enrichment_celltype_v019=CL:0000056;1.86e-10;4!CL:0000515;2.94e-08;3!CL:0000239;4.07e-08;3!CL:1000615;4.07e-08;3!CL:0002306;4.07e-08;3!CL:0000307;4.48e-08;3!CL:0002202;8.07e-07;9!CL:0002632;8.07e-07;9|ontology_enrichment_celltype_v019_2=CL:0000515,1.84e-10,4;CL:0000239,3.52e-08,3;CL:1000615,3.52e-08,3;CL:0002306,3.52e-08,3;CL:0000068,3.69e-08,3;CL:0000069,3.69e-08,3;CL:0000307,3.69e-08,3;CL:0000377,3.69e-08,3;CL:0002202,8.40e-07,9;CL:0002632,8.40e-07,9|ontology_enrichment_development_v019=CL:0000515;1.86e-10;4!CL:0000377;4.48e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000119!8.30e-09!312;UBERON:0000483!5.84e-08!309;UBERON:0003914!1.27e-07!118;UBERON:0000477!1.38e-07!286;UBERON:0000490!2.69e-07!138;UBERON:0002100!9.45e-07!216|ontology_enrichment_uberon_v019=UBERON:0006853;4.07e-08;3!UBERON:0007685;4.07e-08;3!UBERON:0004134;4.07e-08;3|ontology_enrichment_uberon_v019_2=UBERON:0006853,3.52e-08,3;UBERON:0007685,3.52e-08,3;UBERON:0004134,3.52e-08,3|phase1_expression=1.09007027562334,0.428201047781966,0.422863212287913,0,0.446961094427288,0,0,2.52687949370732,0,4.17747692052565,2.09340350391728,0,0,0,0,0.672325146451775,0.602694528023977,2.19093027116212,0,0.246242116153576,0.204000691244253,0,0,0,0,0,0,0,0,0,0.309632246632152,0.919421224478927,2.10844143144775,0.369754010166788,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0.196709770113833,0.393010762749165,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296573126324121,0,1.04535523804977,0,0,0.34362744548263,0.253019692019503,0,0,0,0,0,0,0,0,0.80642697289893,0,0.724122019413995,0,1.34140171940727,0,0.361439152384566,0,0,0,0,0,0.443458794925128,0.263504357079378,1.11332214173056,1.09288586487763,0,0,0,0,0,0,0,0,1.72046919021225,0.347140501607594,0,0.838998872419812,0.550236083880135,1.25396979922086,0,0,0,0.402829317109147,0,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0,0,3.06633274931766,0,0.183201743930407,0,0,2.61656431285521,0,0.12663051166458,0.264818361626438,0,0,0,0,0.74000264525148,0,0,0,0.151357427644931,0,0,2.49728061464256,1.1409436430889,1.34503812496621,0.117434498643765,0.161872944368132,0,0.408308342509787,0.368502951935304,0.206651562351531,0,0,0.910161361938026,1.43723628363248,0.168336113954066,0.125118519871964,0.554128230968366,0,0,0.300476117813194,0.226864366320042,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0.257640540045629,0.18611685633159,0,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0,0.773043412653187,0.272746120590835,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0.236613600079688,0.674338760312407,0.482022059766964,0.441175890929576,0.653638332277218,0.474541238222193,0.539325232640658,0.196221465125346,0.769494313892781,0,0,0,0,0,0.982827216677626,1.77236972004421,0,0,1.54411029268673,0.219500570817251,0,0.804231779293047,0.740707561268237,0,1.03993478527958,1.44331342025273,0,0.117408694235822,2.16549671641611,3.24089858803628,0.761016608938393,0,0,0,0,0,0.93733833986777,0.335964256397719,1.13420077793909,1.16426079513703,1.45316969256981,0.766765358330422,0,0,0,0,0,0.063497894292169,0,1.17217447210047,1.71072446022705,0.205654985406647,0.300343057843917,0,1.90622843387113,0.87192013766656,2.4935017179123,1.16344544182,0,6.762422020448,0,0,0.514414748524284,0,0.799266537048298,0.857867961948885,0,0,2.60588947434988,0.710783897485092,7.12756685640086,0,0.871533458600294,0.099972991182057,0,0,0,0,0,2.85273810081437,2.31650090668127,2.05476322550383,2.32779252211864,0,0.394061520403854,0.431255149719035,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0.178428988797162,0,0.468565659970853,0,0,0,0,0.184369168541703,0.0868836144680828,0.195801157462741,0,0,0,0,0,0,0,0.248107807818777,0,0,0,1.02341449813341,0,1.48418066444991,1.23367755042124,1.06537035187876,0.574890092096664,3.63478100428535,0.697262270759755,0,2.20557117333613,0.368323955743585,0.114814448164607,0.728364672026868,0.131124414959424,0.451199612907412,0.847168708148562,1.56869953835371,0,0.105551628892876,0,0.340187410553031,0.431831832204279,0,0,0,2.80363900349542,6.64860807142979,1.34324852833307,0,0,0,0,0,0.206082023295445,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0.964856007391714,0.107420244868274,0,0.511359764496605,0,0.826424576804891,0.960950336825531,0.382838137483752,0.4046311234222,0.929691098594572,0,2.7881490806424,0.308033580176089,0.53230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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4502 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7406 | |||
|TSSclassifier=W | |||
|UniProt=P02795 | |||
|association_with_transcript=-26bp_to_ENST00000245185_5end | |||
|description=CAGE_peak_2_at_MT2A_5end | |||
|id=chr16:56642041..56642084,+ | |||
|ontology_enrichment_celltype=CL:0000220!3.69e-10!246;CL:0000066!4.99e-10!254;CL:0002321!8.47e-10!248;CL:0002368!5.43e-08!13 | |||
|ontology_enrichment_celltype_v019=CL:0000056;1.86e-10;4!CL:0000515;2.94e-08;3!CL:0000239;4.07e-08;3!CL:1000615;4.07e-08;3!CL:0002306;4.07e-08;3!CL:0000307;4.48e-08;3!CL:0002202;8.07e-07;9!CL:0002632;8.07e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000515,1.84e-10,4;CL:0000239,3.52e-08,3;CL:1000615,3.52e-08,3;CL:0002306,3.52e-08,3;CL:0000068,3.69e-08,3;CL:0000069,3.69e-08,3;CL:0000307,3.69e-08,3;CL:0000377,3.69e-08,3;CL:0002202,8.40e-07,9;CL:0002632,8.40e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000515;1.86e-10;4!CL:0000377;4.48e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000119!8.30e-09!312;UBERON:0000483!5.84e-08!309;UBERON:0003914!1.27e-07!118;UBERON:0000477!1.38e-07!286;UBERON:0000490!2.69e-07!138;UBERON:0002100!9.45e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0006853;4.07e-08;3!UBERON:0007685;4.07e-08;3!UBERON:0004134;4.07e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006853,3.52e-08,3;UBERON:0007685,3.52e-08,3;UBERON:0004134,3.52e-08,3 | |||
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| |||
|short_description=p2@MT2A | |||
}} |
Revision as of 10:49, 11 September 2013
Short description: | p2@MT2A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MT2A_5end |
Coexpression cluster: | NA |
Association with transcript: | -26bp_to_ENST00000245185_5end |
EntrezGene: | MT2A |
HGNC: | 7406 |
UniProt: | P02795 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle myoblast | 1.84e-10 | 4 |
brush border epithelial cell | 3.52e-08 | 3 |
kidney cortex tubule cell | 3.52e-08 | 3 |
epithelial cell of proximal tubule | 3.52e-08 | 3 |
duct epithelial cell | 3.69e-08 | 3 |
branched duct epithelial cell | 3.69e-08 | 3 |
tracheal epithelial cell | 3.69e-08 | 3 |
tracheoblast | 3.69e-08 | 3 |
epithelial cell of tracheobronchial tree | 8.40e-07 | 9 |
epithelial cell of lower respiratory tract | 8.40e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
renal cortex tubule | 3.52e-08 | 3 |
region of nephron tubule | 3.52e-08 | 3 |
proximal tubule | 3.52e-08 | 3 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.