FFCP PHASE1:Hg19::chr16:54964690..54964703,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10265|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14361|TSSclassifier=S|UniProt=P78411|association_with_transcript=-70bp_to_ENST00000394636_5end|description=CAGE_peak_4_at_IRX5_5end|id=chr16:54964690..54964703,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002253;1.98e-23;2!CL:0000228;2.46e-12;1!CL:0002372;2.46e-12;1!CL:0002563;3.26e-12;4!CL:0000054;8.52e-07;2!CL:0000137;8.52e-07;2!CL:0000092;8.52e-07;2|ontology_enrichment_celltype_v019_2=CL:0002253,2.79e-23,2;CL:0000228,2.20e-12,1;CL:0002372,2.20e-12,1;CL:0002563,3.86e-12,4;CL:0000054,7.61e-07,2;CL:0000137,7.61e-07,2;CL:0000092,7.61e-07,2|ontology_enrichment_development_v019=UBERON:0008425;9.36e-13;1!UBERON:0008801;2.46e-12;1!UBERON:0004140;2.46e-12;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:200;8.52e-07;2!DOID:4305;8.52e-07;2|ontology_enrichment_disease_v019_2=DOID:200,7.61e-07,2;DOID:4305,7.61e-07,2|ontology_enrichment_uberon=UBERON:0001004!1.51e-08!72;UBERON:0000065!4.14e-07!53|ontology_enrichment_uberon_v019=UBERON:0001044;4.61e-17;6!UBERON:0003293;4.61e-17;6!UBERON:0003294;4.61e-17;6!UBERON:0010047;4.61e-17;6!UBERON:0003408;4.61e-17;6!UBERON:0000167;4.61e-17;6!UBERON:0001831;2.46e-12;1!UBERON:0001567;2.46e-12;1!UBERON:0001052;3.26e-12;4!UBERON:0001242;3.26e-12;4!UBERON:0001262;3.26e-12;4!UBERON:0004786;3.26e-12;4!UBERON:0004808;3.26e-12;4!UBERON:0001277;3.26e-12;4!UBERON:0004907;5.95e-10;5!UBERON:0004921;1.02e-07;33!UBERON:0001041;1.25e-07;14!UBERON:0000485;2.37e-07;7!UBERON:0003929;2.37e-07;7!UBERON:0001829;8.52e-07;2!UBERON:0004089;8.52e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.97e-17,6;UBERON:0003293,2.97e-17,6;UBERON:0003294,2.97e-17,6;UBERON:0010047,2.97e-17,6;UBERON:0000167,2.97e-17,6;UBERON:0001831,1.40e-12,1;UBERON:0001567,1.40e-12,1;UBERON:0008801,1.40e-12,1;UBERON:0001052,3.86e-12,4;UBERON:0001242,3.86e-12,4;UBERON:0001262,3.86e-12,4;UBERON:0004786,3.86e-12,4;UBERON:0004808,3.86e-12,4;UBERON:0001277,3.86e-12,4;UBERON:0003408,1.37e-10,10;UBERON:0004907,6.80e-10,5;UBERON:0001829,6.42e-07,2;UBERON:0004089,6.42e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0.492484232307152,0.408001382488506,0.626909442956176,0,0,0,0,0,0,0,0,0.154816123316076,0,0.30120591877825,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0.327447688744282,0,0.370784442784429,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0.312160076830321,0,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0,0.206651562351531,0,0,0,0,0,0,0,0,0.612975591598039,0.300476117813194,0.113432183160021,0.179389635688862,0.213557388818567,0,0,0.206105058476878,0.257640540045629,0.18611685633159,0.168776332241266,0.194874010322397,0,0.276149695926898,0.161646056818812,0.355009592516614,0,0.67824236924195,0,0,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0.241011029883482,0.110293972732394,0.435758888184812,0,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0.882926198829301,0,0,0.109750285408626,0,0.301586917234893,0,0.325808305310325,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0.144119953416961,0,0.126995788584338,0,1.17217447210047,0,0,0,0.571652865261156,0,0,0,0,0,0,0,0,1.02882949704857,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,1.42636905040718,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,0,0.813795071099207,0,0,0,0,0.300946099727719,0,0,0,0.368738337083406,0.0868836144680828,0,0,0,0,0,0,0,0,0.496215615637554,0,0.280660094433074,0,0,0,0,0,0.355123450626254,0,0,0.232420756919918,0.846016147141356,0.200506470303285,0.644566922551274,0,0,0,0,0.15403067420883,1.56869953835371,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0.223874754722178,0,0,0,0,0,0.309123034943167,2.38080608527693,0.82509499920588,0,0.650060246036521,0,0.096670718292122,0,0,0,0,0,0.0852266274161009,0.0890320356467374,0.330569830721956,0.192190067365106,0.127612712494584,0.30347334256665,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0.286822704408103,0,0,0,0,0,0.379473173765715,0,0.288666338176536,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0.144269212976445,0.497992903438899,0.318852545457645,0,0,0,0.649243880549111,0,0.228234679033192,0,0,0,0,0,0,0.687010689511529,1.84344458585075,0.671028323677248,0.333698283423817,0,0,0,0,0,0,0,0,0.121360521749513,0.111443384277478,0,0,0,0,0,0,0.111308705022906,0.494411622680279,0.422250816255987,0.19924798825107,0,0,0,0,0,0,0,1.0231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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10265 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14361 | |||
|TSSclassifier=S | |||
|UniProt=P78411 | |||
|association_with_transcript=-70bp_to_ENST00000394636_5end | |||
|description=CAGE_peak_4_at_IRX5_5end | |||
|id=chr16:54964690..54964703,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002253;1.98e-23;2!CL:0000228;2.46e-12;1!CL:0002372;2.46e-12;1!CL:0002563;3.26e-12;4!CL:0000054;8.52e-07;2!CL:0000137;8.52e-07;2!CL:0000092;8.52e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,2.79e-23,2;CL:0000228,2.20e-12,1;CL:0002372,2.20e-12,1;CL:0002563,3.86e-12,4;CL:0000054,7.61e-07,2;CL:0000137,7.61e-07,2;CL:0000092,7.61e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0008425;9.36e-13;1!UBERON:0008801;2.46e-12;1!UBERON:0004140;2.46e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:200;8.52e-07;2!DOID:4305;8.52e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:200,7.61e-07,2;DOID:4305,7.61e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!1.51e-08!72;UBERON:0000065!4.14e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001044;4.61e-17;6!UBERON:0003293;4.61e-17;6!UBERON:0003294;4.61e-17;6!UBERON:0010047;4.61e-17;6!UBERON:0003408;4.61e-17;6!UBERON:0000167;4.61e-17;6!UBERON:0001831;2.46e-12;1!UBERON:0001567;2.46e-12;1!UBERON:0001052;3.26e-12;4!UBERON:0001242;3.26e-12;4!UBERON:0001262;3.26e-12;4!UBERON:0004786;3.26e-12;4!UBERON:0004808;3.26e-12;4!UBERON:0001277;3.26e-12;4!UBERON:0004907;5.95e-10;5!UBERON:0004921;1.02e-07;33!UBERON:0001041;1.25e-07;14!UBERON:0000485;2.37e-07;7!UBERON:0003929;2.37e-07;7!UBERON:0001829;8.52e-07;2!UBERON:0004089;8.52e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001044,2.97e-17,6;UBERON:0003293,2.97e-17,6;UBERON:0003294,2.97e-17,6;UBERON:0010047,2.97e-17,6;UBERON:0000167,2.97e-17,6;UBERON:0001831,1.40e-12,1;UBERON:0001567,1.40e-12,1;UBERON:0008801,1.40e-12,1;UBERON:0001052,3.86e-12,4;UBERON:0001242,3.86e-12,4;UBERON:0001262,3.86e-12,4;UBERON:0004786,3.86e-12,4;UBERON:0004808,3.86e-12,4;UBERON:0001277,3.86e-12,4;UBERON:0003408,1.37e-10,10;UBERON:0004907,6.80e-10,5;UBERON:0001829,6.42e-07,2;UBERON:0004089,6.42e-07,2 | |||
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| |||
|short_description=p4@IRX5 | |||
}} |
Revision as of 10:43, 11 September 2013
Short description: | p4@IRX5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_IRX5_5end |
Coexpression cluster: | NA |
Association with transcript: | -70bp_to_ENST00000394636_5end |
EntrezGene: | IRX5 |
HGNC: | 14361 |
UniProt: | P78411 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 2.79e-23 | 2 |
multinucleate cell | 2.20e-12 | 1 |
myotube | 2.20e-12 | 1 |
intestinal epithelial cell | 3.86e-12 | 4 |
bone matrix secreting cell | 7.61e-07 | 2 |
osteocyte | 7.61e-07 | 2 |
osteoclast | 7.61e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
saliva-secreting gland | 2.97e-17 | 6 |
gland of oral region | 2.97e-17 | 6 |
gland of foregut | 2.97e-17 | 6 |
oral gland | 2.97e-17 | 6 |
oral cavity | 2.97e-17 | 6 |
parotid gland | 1.40e-12 | 1 |
cheek | 1.40e-12 | 1 |
parotid gland primordium | 1.40e-12 | 1 |
rectum | 3.86e-12 | 4 |
intestinal mucosa | 3.86e-12 | 4 |
wall of intestine | 3.86e-12 | 4 |
gastrointestinal system mucosa | 3.86e-12 | 4 |
gastrointestinal system epithelium | 3.86e-12 | 4 |
intestinal epithelium | 3.86e-12 | 4 |
gland of gut | 1.37e-10 | 10 |
lower digestive tract | 6.80e-10 | 5 |
major salivary gland | 6.42e-07 | 2 |
midface | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 7.61e-07 | 2 |
bone giant cell tumor | 7.61e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.