FFCP PHASE1:Hg19::chr16:23076635..23076644,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr16:23076635..23076644,-|id=chr16:23076635..23076644,-|ontology_enrichment_celltype=CL:0000066!3.91e-08!254|ontology_enrichment_celltype_v019=CL:0002138;7.02e-13;6!CL:0002139;6.43e-07;24|ontology_enrichment_celltype_v019_2=CL:0005020,4.49e-13,6;CL:0002138,4.49e-13,6;CL:0005022,4.49e-13,6;CL:0002139,5.40e-07,24|ontology_enrichment_development_v019=CL:0005022;7.02e-13;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.07e-09!57;UBERON:0005068!1.07e-09!57;UBERON:0006241!1.07e-09!57;UBERON:0007135!1.07e-09!57;UBERON:0002020!2.48e-08!34;UBERON:0003528!2.48e-08!34;UBERON:0001893!6.69e-08!34;UBERON:0003080!8.73e-08!42;UBERON:0002346!8.99e-08!90;UBERON:0002791!1.20e-07!33;UBERON:0002780!1.95e-07!41;UBERON:0001890!1.95e-07!41;UBERON:0006240!1.95e-07!41;UBERON:0002616!2.77e-07!59;UBERON:0003075!2.77e-07!86;UBERON:0007284!2.77e-07!86;UBERON:0001869!5.10e-07!32;UBERON:0005743!5.35e-07!86;UBERON:0001017!9.90e-07!82|ontology_enrichment_uberon_v019=UBERON:0000988;3.58e-10;3!UBERON:0001473;1.43e-09;8!UBERON:0004536;1.43e-09;8!UBERON:0006558;1.43e-09;8!UBERON:0000125;9.97e-09;9!UBERON:0002308;9.97e-09;9!UBERON:0002298;1.44e-08;6!UBERON:0002465;1.40e-07;10!UBERON:0002148;1.76e-07;2!UBERON:0006331;1.76e-07;2!UBERON:0009662;1.76e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.03e-09,8;UBERON:0004536,1.03e-09,8;UBERON:0006558,1.03e-09,8;UBERON:0000988,1.69e-09,3;UBERON:0000125,8.78e-09,9;UBERON:0002308,8.78e-09,9;UBERON:0002298,2.63e-08,6;UBERON:0002465,1.08e-07,10;UBERON:0002148,3.52e-07,2;UBERON:0006331,3.52e-07,2;UBERON:0009662,3.52e-07,2;UBERON:0003528,6.00e-07,34;UBERON:0002020,6.00e-07,34;UBERON:0000073,8.60e-07,53;UBERON:0002616,8.60e-07,53|phase1_expression=0.726713517082227,1.2846031433459,0.422863212287913,2.00146596706261,0,0.872338524100369,0,0,0,0.245733936501509,0,0.218441372130172,0,0,0,0.672325146451775,0,0,1.46379839637152,0.246242116153576,0,0.313454721478088,0.85870796139317,0.547497700291537,0.627713197974014,0,0.0821005894499457,0,0,0,0,1.83884244895785,0.30120591877825,0,0.387336002901508,0.710846162437108,0.293600439334847,0,0.200544447470142,0.434021741431704,0.223915474239924,0.32389366601898,0.257575567634187,0.145398238779565,0,0,0,0.411167888021826,0,0,0,0,0.689491361473237,0,0,0.376484679085209,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0.209658645508376,0.22465726229299,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0.541607727530031,0.128091319725675,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0.453237370790265,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0.670700859703636,0.511450247374121,0.361439152384566,0,0,0,0,0.472674085820339,0.443458794925128,0.175669571386252,0.261958150995425,0,0.370784442784429,0.324547393654683,0.174129737299267,0.26591592103773,0,0,0,0.596287222100115,0,0,0,0,0.550236083880135,0.208994966536811,1.03366703667732,1.42306505074684,2.34304428935269,1.20848795132744,0.760272105718513,1.70843440283719,0.735326160691737,0,0.714397826272638,1.12264686313085,0.112611480483322,0,0,0.549605231791222,0,0,0,1.49091585508596,0.12663051166458,0,0.286836620748814,0.709336764396714,0,1.06748995729705,0.24666754841716,0,0.404132016209064,0.490385709340376,0.151357427644931,0,0,0,0,0,0,0.323745888736263,0.421352420106746,0.408308342509787,0,0.103325781175765,0,0,0,0,0.505008341862199,0.125118519871964,0.554128230968366,0,0.30648779579902,0,0.340296549480063,0,0,0,0,0.103052529238439,0,0.37223371266318,0,0.0974370051611986,0,0.184099797284599,0.646584227275248,0,0.10075209822764,0.339121184620975,1.35282597214308,0.272746120590835,0.573609190778008,0.243947412259191,0.397589304964456,0.929551542956147,0.207322110030741,0,1.09493207722749,0,0,0,0,0,0.118306800039844,0.337169380156203,0.482022059766964,0.220587945464788,1.08939722046203,0.71181185733329,0.134831308160164,0.392442930250692,0,0.738155454624648,0,0,0,0,0.982827216677626,0,0,0.491953754172454,0,0.658501712451753,0,0.201057944823262,0.462942225792648,0.325808305310325,0,0,0,0,0.433099343283221,1.38895653772983,1.90254152234598,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0.16798212819886,0.283550194484773,1.34337784054272,0.581267877027924,0,0.492663237895943,0,0.414656231081544,0,0.12624243342638,0.380987365753014,0,0,0,0.102827492703324,0.300343057843917,0,0.336393253036082,0,0.36669142910475,0.129271715757778,0,0,0.26593811658487,0,0,0,0.266422179016099,0.285955987316295,0,0,0.325736184293735,0,0.791951872933429,0.904318131178758,0,0.199945982364114,0,0.502257091432126,0,0.239624855491583,0,0,0,0.4109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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr16:23076635..23076644,- | |||
|id=chr16:23076635..23076644,- | |||
|ontology_enrichment_celltype=CL:0000066!3.91e-08!254 | |||
|ontology_enrichment_celltype_v019=CL:0002138;7.02e-13;6!CL:0002139;6.43e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,4.49e-13,6;CL:0002138,4.49e-13,6;CL:0005022,4.49e-13,6;CL:0002139,5.40e-07,24 | |||
|ontology_enrichment_development_v019=CL:0005022;7.02e-13;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.07e-09!57;UBERON:0005068!1.07e-09!57;UBERON:0006241!1.07e-09!57;UBERON:0007135!1.07e-09!57;UBERON:0002020!2.48e-08!34;UBERON:0003528!2.48e-08!34;UBERON:0001893!6.69e-08!34;UBERON:0003080!8.73e-08!42;UBERON:0002346!8.99e-08!90;UBERON:0002791!1.20e-07!33;UBERON:0002780!1.95e-07!41;UBERON:0001890!1.95e-07!41;UBERON:0006240!1.95e-07!41;UBERON:0002616!2.77e-07!59;UBERON:0003075!2.77e-07!86;UBERON:0007284!2.77e-07!86;UBERON:0001869!5.10e-07!32;UBERON:0005743!5.35e-07!86;UBERON:0001017!9.90e-07!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0000988;3.58e-10;3!UBERON:0001473;1.43e-09;8!UBERON:0004536;1.43e-09;8!UBERON:0006558;1.43e-09;8!UBERON:0000125;9.97e-09;9!UBERON:0002308;9.97e-09;9!UBERON:0002298;1.44e-08;6!UBERON:0002465;1.40e-07;10!UBERON:0002148;1.76e-07;2!UBERON:0006331;1.76e-07;2!UBERON:0009662;1.76e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,1.03e-09,8;UBERON:0004536,1.03e-09,8;UBERON:0006558,1.03e-09,8;UBERON:0000988,1.69e-09,3;UBERON:0000125,8.78e-09,9;UBERON:0002308,8.78e-09,9;UBERON:0002298,2.63e-08,6;UBERON:0002465,1.08e-07,10;UBERON:0002148,3.52e-07,2;UBERON:0006331,3.52e-07,2;UBERON:0009662,3.52e-07,2;UBERON:0003528,6.00e-07,34;UBERON:0002020,6.00e-07,34;UBERON:0000073,8.60e-07,53;UBERON:0002616,8.60e-07,53 | |||
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| |||
|short_description=p@chr16:23076635..23076644,- | |||
}} |
Revision as of 09:42, 11 September 2013
Short description: | p@chr16:23076635..23076644, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr16:23076635..23076644, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 4.49e-13 | 6 |
endothelial cell of lymphatic vessel | 4.49e-13 | 6 |
vascular lymphangioblast | 4.49e-13 | 6 |
endothelial cell of vascular tree | 5.40e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 1.03e-09 | 8 |
lymph vasculature | 1.03e-09 | 8 |
lymphatic part of lymphoid system | 1.03e-09 | 8 |
pons | 1.69e-09 | 3 |
neural nucleus | 8.78e-09 | 9 |
nucleus of brain | 8.78e-09 | 9 |
brainstem | 2.63e-08 | 6 |
lymphoid system | 1.08e-07 | 10 |
locus ceruleus | 3.52e-07 | 2 |
brainstem nucleus | 3.52e-07 | 2 |
hindbrain nucleus | 3.52e-07 | 2 |
brain grey matter | 6.00e-07 | 34 |
gray matter | 6.00e-07 | 34 |
regional part of nervous system | 8.60e-07 | 53 |
regional part of brain | 8.60e-07 | 53 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.