FFCP PHASE1:Hg19::chr16:11439269..11439278,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=116028|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=28349|TSSclassifier=S|UniProt=Q96E14|association_with_transcript=-9bp_to_ENST00000312499_5end|description=CAGE_peak_2_at_RMI2_5end|id=chr16:11439269..11439278,+|ontology_enrichment_celltype=CL:0000333!5.26e-10!41;CL:0000221!1.10e-07!71;CL:0000133!6.27e-07!59|ontology_enrichment_celltype_v019=CL:0002322;8.02e-31;5!CL:0002321;7.89e-16;15!CL:0000148;1.44e-15;10!CL:0002077;3.15e-12;34!CL:0002032;2.79e-11;1!CL:0000557;2.79e-11;1!CL:0000147;3.50e-11;14!CL:0000785;7.81e-11;1!CL:0000222;7.81e-11;1!CL:0002553;7.81e-11;1!CL:0000819;7.81e-11;1!CL:0000312;1.59e-08;5!CL:0000710;7.06e-08;20!CL:0000240;3.05e-07;6!CL:0000311;3.05e-07;6!CL:0000079;3.05e-07;6!CL:0000237;3.05e-07;6|ontology_enrichment_celltype_v019_2=CL:0002322,1.44e-30,5;CL:0000148,2.90e-15,10;CL:0000541,2.90e-15,10;CL:0002077,7.89e-13,34;CL:0000819,3.76e-11,1;CL:0002553,4.15e-11,1;CL:0000147,5.72e-11,14;CL:0000312,1.66e-08,5;CL:0000710,9.89e-08,20;CL:0000240,3.15e-07,6;CL:0000311,3.15e-07,6;CL:0000079,3.15e-07,6;CL:0000237,3.15e-07,6;CL:0000036,3.15e-07,6;CL:0000357,3.15e-07,6;CL:0000114,3.15e-07,6;CL:0000221,3.76e-07,72|ontology_enrichment_development_v019=CL:0000357;3.05e-07;6!CL:0000114;3.05e-07;6|ontology_enrichment_disease=DOID:14566!2.10e-11!239;DOID:162!9.47e-11!235;DOID:0050686!7.00e-07!137|ontology_enrichment_disease_v019=DOID:0060073;7.81e-11;1!DOID:8675;7.81e-11;1|ontology_enrichment_disease_v019_2=DOID:0060073,3.76e-11,1;DOID:8675,3.76e-11,1|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0.602694528023977,0,0,0.246242116153576,0.408001382488506,0,0.572471974262113,0.410623275218653,0.125542639594803,0.0764134057479513,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0.154934401160603,0.284338464974843,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0.130059347559878,0.164437904603676,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0.289693037921647,0,0,0.189069634328136,0,0,0,0,1.11235332835329,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0.488124115096339,0,0,0.446498641420399,0,0,1.53316637465883,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0.468642863667593,0,0.570471821544449,0,0.23486899728753,0.323745888736263,0.421352420106746,0,0,0,0,0,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.339121184620975,0,0,0,1.95157929807353,0.927708378250397,2.09149097165133,1.0366105501537,1.00928340350251,1.09493207722749,0,0.643240938192885,0,0.464367928031979,0,0,0.337169380156203,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0.343135620597051,0.109750285408626,1.1240175325762,0.402115889646523,0.185176890317059,0.325808305310325,0,0,0.115930404975077,0.117408694235822,0,0,0,0.790204397959275,0,0,0,0.148631162288728,0,0,0,0.179117045405697,0,0.766765358330422,0,0.088048434013226,0,0,0,0.444485260045183,0.381988425558278,0,0,1.13110241973656,0.300343057843917,0,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0.514414748524284,0,0.799266537048298,0,0,0,0,0,0.791951872933429,0,0,0.099972991182057,0,0,0,0,0,0,0.289562613335158,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737476674166813,0.0868836144680828,0,0,0,0,0,0.303127571446259,0,0,0,0.153461973288062,0,0,0,0,0,0.308419387605311,0,0.0821271560138091,0,0.116210378459959,0.483437798366489,0,0,0.114814448164607,0,0,0.451199612907412,0,0.784349769176855,0,0.105551628892876,0,0,0,0,0.541892875087706,0,0,0,0.223874754722178,0.219259876645935,0,0.512900250232778,0,0,0,0,0.082509499920588,0,0,0,0.096670718292122,0.154048617114644,0.767518373630648,0.137836572484531,0.107420244868274,0.435050081742686,0.170453254832202,0,0,0,0,0.10115778085555,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0,0,1.535386747868,0,0,0,0,0,0.117812402345686,0,0,0.421258456238981,0.48763373908959,0,0,0.545999645631943,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0,0.379473173765715,0.349934720244983,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0.371606350251437,0.144269212976445,0.497992903438899,0,0.798317485731266,0,0,0,0,0,0.313359791546046,2.50634477090067,0.338583555603207,0.481764225311099,0.605399121573143,0,0.343505344755765,0,0.223676107892416,0.333698283423817,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0.568272293612826,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0.123084805461069,0,0.0898683511473268,0,1.53471711068062,0.0986434056369336,0,0,0,0.185536196323703,0,0.260427761085233,0.524759999977174,0,0.341380344856499,0.508507300585533,0.472775363535873,0.344743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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=116028 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=28349 | |||
|TSSclassifier=S | |||
|UniProt=Q96E14 | |||
|association_with_transcript=-9bp_to_ENST00000312499_5end | |||
|description=CAGE_peak_2_at_RMI2_5end | |||
|id=chr16:11439269..11439278,+ | |||
|ontology_enrichment_celltype=CL:0000333!5.26e-10!41;CL:0000221!1.10e-07!71;CL:0000133!6.27e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002322;8.02e-31;5!CL:0002321;7.89e-16;15!CL:0000148;1.44e-15;10!CL:0002077;3.15e-12;34!CL:0002032;2.79e-11;1!CL:0000557;2.79e-11;1!CL:0000147;3.50e-11;14!CL:0000785;7.81e-11;1!CL:0000222;7.81e-11;1!CL:0002553;7.81e-11;1!CL:0000819;7.81e-11;1!CL:0000312;1.59e-08;5!CL:0000710;7.06e-08;20!CL:0000240;3.05e-07;6!CL:0000311;3.05e-07;6!CL:0000079;3.05e-07;6!CL:0000237;3.05e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.44e-30,5;CL:0000148,2.90e-15,10;CL:0000541,2.90e-15,10;CL:0002077,7.89e-13,34;CL:0000819,3.76e-11,1;CL:0002553,4.15e-11,1;CL:0000147,5.72e-11,14;CL:0000312,1.66e-08,5;CL:0000710,9.89e-08,20;CL:0000240,3.15e-07,6;CL:0000311,3.15e-07,6;CL:0000079,3.15e-07,6;CL:0000237,3.15e-07,6;CL:0000036,3.15e-07,6;CL:0000357,3.15e-07,6;CL:0000114,3.15e-07,6;CL:0000221,3.76e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000357;3.05e-07;6!CL:0000114;3.05e-07;6 | |||
|ontology_enrichment_disease=DOID:14566!2.10e-11!239;DOID:162!9.47e-11!235;DOID:0050686!7.00e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:0060073;7.81e-11;1!DOID:8675;7.81e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.76e-11,1;DOID:8675,3.76e-11,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| |||
|short_description=p2@RMI2 | |||
}} |
Revision as of 09:12, 11 September 2013
Short description: | p2@RMI2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_RMI2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000312499_5end |
EntrezGene: | RMI2 |
HGNC: | 28349 |
UniProt: | Q96E14 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.44e-30 | 5 |
melanocyte | 2.90e-15 | 10 |
melanoblast | 2.90e-15 | 10 |
ecto-epithelial cell | 7.89e-13 | 34 |
B-1 B cell | 3.76e-11 | 1 |
lung fibroblast | 4.15e-11 | 1 |
pigment cell | 5.72e-11 | 14 |
keratinocyte | 1.66e-08 | 5 |
neurecto-epithelial cell | 9.89e-08 | 20 |
stratified squamous epithelial cell | 3.15e-07 | 6 |
keratin accumulating cell | 3.15e-07 | 6 |
stratified epithelial cell | 3.15e-07 | 6 |
keratinizing barrier epithelial cell | 3.15e-07 | 6 |
epithelial fate stem cell | 3.15e-07 | 6 |
stratified epithelial stem cell | 3.15e-07 | 6 |
surface ectodermal cell | 3.15e-07 | 6 |
ectodermal cell | 3.76e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.76e-11 | 1 |
lymphosarcoma | 3.76e-11 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.