FFCP PHASE1:Hg19::chr16:11370330..11370342,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5620|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9448|TSSclassifier=S|UniProt=P04554,Q6ZMM0,Q1LZN1|association_with_transcript=0bp_to_ENST00000241808,ENST00000435245,NM_002762,uc002dau.1,uc010bus.1_5end|coexpression_cluster_id=C1|description=CAGE_peak_1_at_PRM2_5end|id=chr16:11370330..11370342,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0007297;1.08e-36;2!UBERON:0008801;5.14e-19;1!UBERON:0005754;5.14e-19;1!UBERON:0009117;2.53e-08;10!UBERON:0005564;2.53e-08;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0006947!3.78e-22!3;UBERON:0004054!3.78e-22!3;UBERON:0005904!9.24e-17!4;UBERON:0003135!2.52e-16!11;UBERON:0007023!4.60e-16!115;UBERON:0003101!3.51e-11!22;UBERON:0000079!3.51e-11!22;UBERON:0004177!2.05e-09!7;UBERON:0005057!6.78e-09!26;UBERON:0000473!9.91e-09!8;UBERON:0001301!1.22e-08!1;UBERON:0001000!1.63e-08!1;UBERON:0005352!1.63e-08!1;UBERON:0000998!1.88e-08!1;UBERON:0006868!1.88e-08!1;UBERON:0001831!2.02e-08!1;UBERON:0001567!2.02e-08!1;UBERON:0008801!2.02e-08!1;UBERON:0002336!2.89e-08!1;UBERON:0001018!2.89e-08!1;UBERON:0002473!2.89e-08!1;UBERON:0005340!2.89e-08!1;UBERON:0002316!2.89e-08!1;UBERON:0003544!2.89e-08!1;UBERON:0001020!2.89e-08!1;UBERON:0005970!2.89e-08!1;UBERON:0002437!2.89e-08!1;UBERON:0001882!3.10e-08!1;UBERON:0005403!3.10e-08!1;UBERON:0002530!5.32e-08!59;UBERON:0002370!6.48e-08!4;UBERON:0005058!6.48e-08!4;UBERON:0009113!6.48e-08!4;UBERON:0003295!6.48e-08!4;UBERON:0005562!6.48e-08!4;UBERON:0002022!7.16e-08!1;UBERON:0003408!7.73e-07!10;UBERON:0002791!9.94e-07!33|ontology_enrichment_uberon_v019=UBERON:0006947;4.94e-54;3!UBERON:0004054;4.94e-54;3!UBERON:0003135;4.79e-41;11!UBERON:0005904;9.28e-41;4!UBERON:0000473;4.65e-21;8!UBERON:0003101;1.17e-20;22!UBERON:0000079;1.17e-20;22!UBERON:0001301;1.56e-19;1!UBERON:0001000;3.25e-19;1!UBERON:0005352;3.25e-19;1!UBERON:0001831;5.14e-19;1!UBERON:0000998;5.14e-19;1!UBERON:0006868;5.14e-19;1!UBERON:0001567;5.14e-19;1!UBERON:0000058;8.81e-17;10!UBERON:0002360;2.99e-10;2!UBERON:0000094;2.99e-10;2!UBERON:0010743;2.99e-10;2!UBERON:0001829;3.42e-10;2!UBERON:0004089;3.42e-10;2!UBERON:0000991;2.02e-08;21!UBERON:0004175;2.54e-08;21!UBERON:0003133;6.57e-07;44|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.51e-54,3;UBERON:0004054,4.51e-54,3;UBERON:0003135,4.59e-41,11;UBERON:0005904,8.67e-41,4;UBERON:0000473,4.50e-21,8;UBERON:0003101,1.15e-20,22;UBERON:0000079,1.15e-20,22;UBERON:0001301,1.56e-19,1;UBERON:0001000,3.25e-19,1;UBERON:0005352,3.25e-19,1;UBERON:0000998,4.69e-19,1;UBERON:0006868,4.69e-19,1;UBERON:0001831,5.62e-19,1;UBERON:0001567,5.62e-19,1;UBERON:0008801,5.62e-19,1;UBERON:0002360,2.99e-10,2;UBERON:0000094,2.99e-10,2;UBERON:0010743,2.99e-10,2;UBERON:0001829,3.58e-10,2;UBERON:0004089,3.58e-10,2;UBERON:0007023,1.21e-09,114;UBERON:0003133,1.56e-09,48;UBERON:0000058,3.83e-09,19;UBERON:0000080,5.87e-09,9;UBERON:0002120,5.87e-09,9;UBERON:0004875,5.87e-09,9;UBERON:0005721,5.87e-09,9;UBERON:0005754,5.87e-09,9;UBERON:0007297,5.87e-09,9;UBERON:0000991,2.00e-08,21;UBERON:0009196,2.00e-08,21;UBERON:0009117,2.00e-08,21;UBERON:0005564,2.00e-08,21;UBERON:0004176,4.55e-08,22;UBERON:0005156,9.26e-08,59;UBERON:0000990,9.26e-08,59;UBERON:0004876,1.73e-07,11;UBERON:0002553,1.74e-07,61;UBERON:0004175,4.41e-07,25;UBERON:0003887,6.16e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4228.9869001324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.983167467613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1215701165169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.19385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404406797884062,0,0,0,0,0,4.73501283419269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,113.222881020836,0,0.19351266257817,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5620 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9448 | |||
|TSSclassifier=S | |||
|UniProt=P04554,Q6ZMM0,Q1LZN1 | |||
|association_with_transcript=0bp_to_ENST00000241808,ENST00000435245,NM_002762,uc002dau.1,uc010bus.1_5end | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_PRM2_5end | |||
|id=chr16:11370330..11370342,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.08e-36;2!UBERON:0008801;5.14e-19;1!UBERON:0005754;5.14e-19;1!UBERON:0009117;2.53e-08;10!UBERON:0005564;2.53e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!3.78e-22!3;UBERON:0004054!3.78e-22!3;UBERON:0005904!9.24e-17!4;UBERON:0003135!2.52e-16!11;UBERON:0007023!4.60e-16!115;UBERON:0003101!3.51e-11!22;UBERON:0000079!3.51e-11!22;UBERON:0004177!2.05e-09!7;UBERON:0005057!6.78e-09!26;UBERON:0000473!9.91e-09!8;UBERON:0001301!1.22e-08!1;UBERON:0001000!1.63e-08!1;UBERON:0005352!1.63e-08!1;UBERON:0000998!1.88e-08!1;UBERON:0006868!1.88e-08!1;UBERON:0001831!2.02e-08!1;UBERON:0001567!2.02e-08!1;UBERON:0008801!2.02e-08!1;UBERON:0002336!2.89e-08!1;UBERON:0001018!2.89e-08!1;UBERON:0002473!2.89e-08!1;UBERON:0005340!2.89e-08!1;UBERON:0002316!2.89e-08!1;UBERON:0003544!2.89e-08!1;UBERON:0001020!2.89e-08!1;UBERON:0005970!2.89e-08!1;UBERON:0002437!2.89e-08!1;UBERON:0001882!3.10e-08!1;UBERON:0005403!3.10e-08!1;UBERON:0002530!5.32e-08!59;UBERON:0002370!6.48e-08!4;UBERON:0005058!6.48e-08!4;UBERON:0009113!6.48e-08!4;UBERON:0003295!6.48e-08!4;UBERON:0005562!6.48e-08!4;UBERON:0002022!7.16e-08!1;UBERON:0003408!7.73e-07!10;UBERON:0002791!9.94e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;4.94e-54;3!UBERON:0004054;4.94e-54;3!UBERON:0003135;4.79e-41;11!UBERON:0005904;9.28e-41;4!UBERON:0000473;4.65e-21;8!UBERON:0003101;1.17e-20;22!UBERON:0000079;1.17e-20;22!UBERON:0001301;1.56e-19;1!UBERON:0001000;3.25e-19;1!UBERON:0005352;3.25e-19;1!UBERON:0001831;5.14e-19;1!UBERON:0000998;5.14e-19;1!UBERON:0006868;5.14e-19;1!UBERON:0001567;5.14e-19;1!UBERON:0000058;8.81e-17;10!UBERON:0002360;2.99e-10;2!UBERON:0000094;2.99e-10;2!UBERON:0010743;2.99e-10;2!UBERON:0001829;3.42e-10;2!UBERON:0004089;3.42e-10;2!UBERON:0000991;2.02e-08;21!UBERON:0004175;2.54e-08;21!UBERON:0003133;6.57e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,4.51e-54,3;UBERON:0004054,4.51e-54,3;UBERON:0003135,4.59e-41,11;UBERON:0005904,8.67e-41,4;UBERON:0000473,4.50e-21,8;UBERON:0003101,1.15e-20,22;UBERON:0000079,1.15e-20,22;UBERON:0001301,1.56e-19,1;UBERON:0001000,3.25e-19,1;UBERON:0005352,3.25e-19,1;UBERON:0000998,4.69e-19,1;UBERON:0006868,4.69e-19,1;UBERON:0001831,5.62e-19,1;UBERON:0001567,5.62e-19,1;UBERON:0008801,5.62e-19,1;UBERON:0002360,2.99e-10,2;UBERON:0000094,2.99e-10,2;UBERON:0010743,2.99e-10,2;UBERON:0001829,3.58e-10,2;UBERON:0004089,3.58e-10,2;UBERON:0007023,1.21e-09,114;UBERON:0003133,1.56e-09,48;UBERON:0000058,3.83e-09,19;UBERON:0000080,5.87e-09,9;UBERON:0002120,5.87e-09,9;UBERON:0004875,5.87e-09,9;UBERON:0005721,5.87e-09,9;UBERON:0005754,5.87e-09,9;UBERON:0007297,5.87e-09,9;UBERON:0000991,2.00e-08,21;UBERON:0009196,2.00e-08,21;UBERON:0009117,2.00e-08,21;UBERON:0005564,2.00e-08,21;UBERON:0004176,4.55e-08,22;UBERON:0005156,9.26e-08,59;UBERON:0000990,9.26e-08,59;UBERON:0004876,1.73e-07,11;UBERON:0002553,1.74e-07,61;UBERON:0004175,4.41e-07,25;UBERON:0003887,6.16e-07,12 | |||
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|short_description=p1@PRM2 | |||
}} |
Revision as of 09:12, 11 September 2013
Short description: | p1@PRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PRM2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000241808, ENST00000435245, NM_002762, uc002dau.1, uc010bus.1_5end |
EntrezGene: | PRM2 |
HGNC: | 9448 |
UniProt: | P04554Q6ZMM0Q1LZN1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.