FFCP PHASE1:Hg19::chr16:692891..692913,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10232|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding|HGNC=7371|TSSclassifier=W|UniProt=|association_with_transcript=-348bp_to_ENST00000445361,ENST00000446427_5end|coexpression_cluster_id=C0|description=CAGE_peak_9_at_MSLN_5end|id=chr16:692891..692913,+|ontology_enrichment_celltype=CL:0000766!4.23e-84!76;CL:0000839!9.86e-77!70;CL:0000557!2.05e-75!71;CL:0002194!1.29e-70!63;CL:0000576!1.29e-70!63;CL:0000040!1.29e-70!63;CL:0000559!1.29e-70!63;CL:0002009!5.73e-68!65;CL:0002057!1.92e-65!42;CL:0000763!4.21e-63!112;CL:0000049!4.21e-63!112;CL:0000860!3.43e-60!45;CL:0000738!1.72e-48!140;CL:0000037!4.13e-44!172;CL:0000566!4.13e-44!172;CL:0002031!6.89e-44!124;CL:0002032!1.14e-43!165;CL:0000837!1.14e-43!165;CL:0002087!7.23e-41!119;CL:0000988!1.56e-40!182;CL:0000134!6.87e-18!358;CL:0002320!8.20e-18!365;CL:0002393!3.46e-16!9;CL:0002397!3.46e-16!9;CL:0000219!8.52e-16!390;CL:0000048!2.80e-11!430;CL:0000034!7.57e-11!444;CL:0000723!7.79e-11!436;CL:0002274!4.22e-10!5;CL:0000457!4.22e-10!5;CL:0002191!4.22e-10!5;CL:0000097!4.22e-10!5;CL:0000831!4.22e-10!5;CL:0002028!4.22e-10!5;CL:0000235!4.45e-07!10;CL:0000063!4.75e-07!578|ontology_enrichment_celltype_v019=CL:0000860;5.04e-82;33!CL:0002057;5.04e-82;33!CL:0000473;4.38e-81;39!CL:0000234;4.38e-81;39!CL:0000576;6.94e-49;48!CL:0000766;5.41e-45;69!CL:0000235;5.40e-20;6!CL:0000763;3.44e-19;100!CL:0002087;6.77e-14;104!CL:0002393;4.71e-13;6!CL:0002397;4.71e-13;6!CL:0000738;5.52e-13;136!CL:0000097;7.74e-09;5!CL:0000988;9.18e-07;177|ontology_enrichment_celltype_v019_2=CL:0000473,1.74e-110,48;CL:0000234,1.74e-110,48;CL:0000839,3.71e-97,66;CL:0000557,1.27e-95,67;CL:0000766,1.13e-93,72;CL:0002194,2.77e-92,59;CL:0000576,2.77e-92,59;CL:0000040,2.77e-92,59;CL:0000559,2.77e-92,59;CL:0000860,1.62e-91,42;CL:0002057,1.62e-91,42;CL:0002009,4.45e-89,61;CL:0000763,2.62e-60,108;CL:0000049,2.62e-60,108;CL:0002031,1.59e-50,120;CL:0000738,3.80e-49,136;CL:0002087,4.28e-47,115;CL:0000037,2.04e-38,168;CL:0002032,3.90e-38,161;CL:0000837,3.90e-38,161;CL:0000988,4.31e-36,177;CL:0000235,5.62e-20,6;CL:0000134,2.50e-15,354;CL:0002320,7.04e-15,361;CL:0000219,2.69e-13,386;CL:0000034,1.28e-11,441;CL:0000048,2.33e-11,427;CL:0000723,4.31e-11,433;CL:0000097,6.74e-09,5;CL:0002028,6.74e-09,5;CL:0002393,1.06e-08,9;CL:0002397,1.06e-08,9|ontology_enrichment_development_v019=CL:0002057;2.21e-68;42!CL:0000049;1.07e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.75e-67!80;UBERON:0001474!1.42e-61!86;UBERON:0002390!4.06e-57!102;UBERON:0003061!4.06e-57!102;UBERON:0004765!9.90e-52!101;UBERON:0001434!9.90e-52!101;UBERON:0002193!2.17e-50!112;UBERON:0002405!2.48e-50!115;UBERON:0002204!1.78e-24!167;UBERON:0003081!1.25e-17!216;UBERON:0002384!1.98e-17!375|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.35e-83,76;UBERON:0001474,5.03e-77,82;UBERON:0004765,1.31e-69,90;UBERON:0002405,3.73e-67,93;UBERON:0002390,5.21e-67,98;UBERON:0003061,5.21e-67,98;UBERON:0001434,5.42e-62,100;UBERON:0002193,3.49e-60,108;UBERON:0002204,2.62e-34,167;UBERON:0003081,1.16e-28,203;UBERON:0000926,8.81e-16,315;UBERON:0004120,8.81e-16,315;UBERON:0006603,8.81e-16,315;UBERON:0002384,2.88e-14,371|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0,0,0,2.76997704265939,5.21415563422368,4.34021741431704,0.447830948479849,0.647787332037959,0.257575567634187,1.59938062657521,1.88937971844405,1.21292030593908,4.64858073811369,6.57868620834921,4.33588919253145,1.1507695692886,2.30544635876191,3.78371567821736,5.5159308917859,7.74581620300591,5.41705946377367,3.38836211176688,4.36649840092553,3.37085226667627,6.73384563215986,6.09765151444578,3.19668562899521,0.329851300186716,0.398927315243264,0,17.7027635563436,19.8584828641899,17.4390229718761,0.75374599577023,0,1.52032191293582,3.02699751316684,18.0456041633907,14.8737322097216,1.05627643155971,0.850417199860174,0.209658645508376,0.336985893439485,0.150176892841506,0,0.285012743741249,0.99458338599545,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,1.12101712596307,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.348259474598534,1.32957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,2.34004265139238,2.0808362720422,0,0,0,0,0,0,0.985326475791887,1.93706554829097,1.65862492432618,0.576479813667846,2.27236380167484,0,0,0,0,0.411309970813294,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=7371 | |||
|TSSclassifier=W | |||
|UniProt= | |||
|association_with_transcript=-348bp_to_ENST00000445361,ENST00000446427_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_9_at_MSLN_5end | |||
|id=chr16:692891..692913,+ | |||
|ontology_enrichment_celltype=CL:0000766!4.23e-84!76;CL:0000839!9.86e-77!70;CL:0000557!2.05e-75!71;CL:0002194!1.29e-70!63;CL:0000576!1.29e-70!63;CL:0000040!1.29e-70!63;CL:0000559!1.29e-70!63;CL:0002009!5.73e-68!65;CL:0002057!1.92e-65!42;CL:0000763!4.21e-63!112;CL:0000049!4.21e-63!112;CL:0000860!3.43e-60!45;CL:0000738!1.72e-48!140;CL:0000037!4.13e-44!172;CL:0000566!4.13e-44!172;CL:0002031!6.89e-44!124;CL:0002032!1.14e-43!165;CL:0000837!1.14e-43!165;CL:0002087!7.23e-41!119;CL:0000988!1.56e-40!182;CL:0000134!6.87e-18!358;CL:0002320!8.20e-18!365;CL:0002393!3.46e-16!9;CL:0002397!3.46e-16!9;CL:0000219!8.52e-16!390;CL:0000048!2.80e-11!430;CL:0000034!7.57e-11!444;CL:0000723!7.79e-11!436;CL:0002274!4.22e-10!5;CL:0000457!4.22e-10!5;CL:0002191!4.22e-10!5;CL:0000097!4.22e-10!5;CL:0000831!4.22e-10!5;CL:0002028!4.22e-10!5;CL:0000235!4.45e-07!10;CL:0000063!4.75e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000860;5.04e-82;33!CL:0002057;5.04e-82;33!CL:0000473;4.38e-81;39!CL:0000234;4.38e-81;39!CL:0000576;6.94e-49;48!CL:0000766;5.41e-45;69!CL:0000235;5.40e-20;6!CL:0000763;3.44e-19;100!CL:0002087;6.77e-14;104!CL:0002393;4.71e-13;6!CL:0002397;4.71e-13;6!CL:0000738;5.52e-13;136!CL:0000097;7.74e-09;5!CL:0000988;9.18e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.74e-110,48;CL:0000234,1.74e-110,48;CL:0000839,3.71e-97,66;CL:0000557,1.27e-95,67;CL:0000766,1.13e-93,72;CL:0002194,2.77e-92,59;CL:0000576,2.77e-92,59;CL:0000040,2.77e-92,59;CL:0000559,2.77e-92,59;CL:0000860,1.62e-91,42;CL:0002057,1.62e-91,42;CL:0002009,4.45e-89,61;CL:0000763,2.62e-60,108;CL:0000049,2.62e-60,108;CL:0002031,1.59e-50,120;CL:0000738,3.80e-49,136;CL:0002087,4.28e-47,115;CL:0000037,2.04e-38,168;CL:0002032,3.90e-38,161;CL:0000837,3.90e-38,161;CL:0000988,4.31e-36,177;CL:0000235,5.62e-20,6;CL:0000134,2.50e-15,354;CL:0002320,7.04e-15,361;CL:0000219,2.69e-13,386;CL:0000034,1.28e-11,441;CL:0000048,2.33e-11,427;CL:0000723,4.31e-11,433;CL:0000097,6.74e-09,5;CL:0002028,6.74e-09,5;CL:0002393,1.06e-08,9;CL:0002397,1.06e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;2.21e-68;42!CL:0000049;1.07e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.75e-67!80;UBERON:0001474!1.42e-61!86;UBERON:0002390!4.06e-57!102;UBERON:0003061!4.06e-57!102;UBERON:0004765!9.90e-52!101;UBERON:0001434!9.90e-52!101;UBERON:0002193!2.17e-50!112;UBERON:0002405!2.48e-50!115;UBERON:0002204!1.78e-24!167;UBERON:0003081!1.25e-17!216;UBERON:0002384!1.98e-17!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.35e-83,76;UBERON:0001474,5.03e-77,82;UBERON:0004765,1.31e-69,90;UBERON:0002405,3.73e-67,93;UBERON:0002390,5.21e-67,98;UBERON:0003061,5.21e-67,98;UBERON:0001434,5.42e-62,100;UBERON:0002193,3.49e-60,108;UBERON:0002204,2.62e-34,167;UBERON:0003081,1.16e-28,203;UBERON:0000926,8.81e-16,315;UBERON:0004120,8.81e-16,315;UBERON:0006603,8.81e-16,315;UBERON:0002384,2.88e-14,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.393364276848904,0.767658796194425,0.928896739896456,0,0,0,0,0,0,2.76997704265939,5.21415563422368,4.34021741431704,0.447830948479849,0.647787332037959,0.257575567634187,1.59938062657521,1.88937971844405,1.21292030593908,4.64858073811369,6.57868620834921,4.33588919253145,1.1507695692886,2.30544635876191,3.78371567821736,5.5159308917859,7.74581620300591,5.41705946377367,3.38836211176688,4.36649840092553,3.37085226667627,6.73384563215986,6.09765151444578,3.19668562899521,0.329851300186716,0.398927315243264,0,17.7027635563436,19.8584828641899,17.4390229718761,0.75374599577023,0,1.52032191293582,3.02699751316684,18.0456041633907,14.8737322097216,1.05627643155971,0.850417199860174,0.209658645508376,0.336985893439485,0.150176892841506,0,0.285012743741249,0.99458338599545,0.182664153764634,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,1.12101712596307,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0.649094787309367,0.348259474598534,1.32957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,2.53510069643662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,2.34004265139238,2.0808362720422,0,0,0,0,0,0,0.985326475791887,1.93706554829097,1.65862492432618,0.576479813667846,2.27236380167484,0,0,0,0,0.411309970813294,0.300343057843917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.64871341923571,2.51128545716063,10.5416969741516,0,0,0,0,0,0,0,0,0,0.513372145118994,0,0,0,0,0,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72571360654893,0.320182673410333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0.156679895773023,0,0,0,0,0,0.343505344755765,0,0,0,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0.16480387422676,0,0,0.276283915531148,0,0,0,0,0,0,0.511572370226872,0,0,0,0,0,0,0.260427761085233,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0.544017803369474,0.7520696820681,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0.285465333544967,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@MSLN | |||
}} |
Revision as of 11:19, 11 September 2013
Short description: | p9@MSLN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_MSLN_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -348bp_to_ENST00000445361, ENST00000446427_5end |
EntrezGene: | MSLN |
HGNC: | 7371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.35e-83 | 76 |
bone element | 5.03e-77 | 82 |
skeletal element | 1.31e-69 | 90 |
immune system | 3.73e-67 | 93 |
hematopoietic system | 5.21e-67 | 98 |
blood island | 5.21e-67 | 98 |
skeletal system | 5.42e-62 | 100 |
hemolymphoid system | 3.49e-60 | 108 |
musculoskeletal system | 2.62e-34 | 167 |
lateral plate mesoderm | 1.16e-28 | 203 |
mesoderm | 8.81e-16 | 315 |
mesoderm-derived structure | 8.81e-16 | 315 |
presumptive mesoderm | 8.81e-16 | 315 |
connective tissue | 2.88e-14 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.