FFCP PHASE1:Hg19::chr15:74466268..74466273,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3671|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6133|TSSclassifier=W|UniProt=O14498|association_with_transcript=181bp_to_NM_005545,uc002axg.1_5end|coexpression_cluster_id=C1751|description=CAGE_peak_10_at_ISLR_5end|id=chr15:74466268..74466273,+|ontology_enrichment_celltype=CL:0000057!2.60e-16!75;CL:0002334!5.41e-16!12;CL:0000055!3.05e-13!180;CL:0002620!8.56e-08!23;CL:0000327!3.35e-07!14;CL:0000136!7.36e-07!15|ontology_enrichment_celltype_v019=CL:0000153;1.61e-18;9!CL:0000447;1.61e-18;9!CL:0002575;1.62e-14;2!CL:0000327;4.81e-11;15!CL:0000138;1.28e-10;6!CL:0000346;4.47e-10;3!CL:1000428;4.47e-10;3!CL:0002615;5.60e-10;3!CL:0000214;5.60e-10;3!CL:0002579;1.02e-09;3!CL:0002334;5.96e-09;12!CL:0000136;2.19e-08;13!CL:0002591;2.61e-08;1!CL:0000499;3.32e-08;28!CL:0002581;6.62e-08;1!CL:0002616;6.62e-08;1!CL:0000669;1.08e-07;4|ontology_enrichment_celltype_v019_2=CL:0000153,1.81e-18,9;CL:0000447,1.81e-18,9;CL:0002575,2.89e-14,2;CL:0000327,5.15e-11,15;CL:0000058,1.14e-10,6;CL:0000138,1.14e-10,6;CL:0000346,3.65e-10,3;CL:1000428,3.65e-10,3;CL:0002615,5.74e-10,3;CL:0002579,6.57e-10,3;CL:0000214,7.51e-10,3;CL:0002334,4.93e-09,12;CL:0002591,2.52e-08,1;CL:0000499,3.48e-08,28;CL:0002616,4.40e-08,1;CL:0002581,7.10e-08,1;CL:0000669,1.44e-07,4;CL:0000136,2.76e-07,15;CL:0000057,3.75e-07,76|ontology_enrichment_development_v019=UBERON:0003124;6.62e-08;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004457!1.44e-11!12;UBERON:0000042!1.44e-11!12;UBERON:0003688!7.75e-10!6;UBERON:0002358!7.75e-10!6;UBERON:0003684!7.75e-10!6;UBERON:0001178!7.75e-10!6;UBERON:0004923!5.02e-07!57|ontology_enrichment_uberon_v019=UBERON:0004457;3.00e-26;9!UBERON:0000042;3.00e-26;9!UBERON:0003688;5.51e-18;6!UBERON:0002358;5.51e-18;6!UBERON:0003684;5.51e-18;6!UBERON:0001178;5.51e-18;6!UBERON:0005406;4.03e-14;2!UBERON:0000412;4.47e-10;3!UBERON:0001992;4.47e-10;3!UBERON:0006915;5.60e-10;3!UBERON:0007616;5.60e-10;3!UBERON:0002217;5.60e-10;3!UBERON:0002018;5.60e-10;3|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.28e-19,12;UBERON:0000042,1.28e-19,12;UBERON:0003688,3.63e-18,6;UBERON:0002358,3.63e-18,6;UBERON:0003684,3.63e-18,6;UBERON:0001178,3.63e-18,6;UBERON:0005406,2.89e-14,2;UBERON:0000412,3.65e-10,3;UBERON:0001992,3.65e-10,3;UBERON:0006915,7.51e-10,3;UBERON:0007616,7.51e-10,3;UBERON:0002217,7.51e-10,3;UBERON:0002018,7.51e-10,3;UBERON:0004923,1.70e-08,66|phase1_expression=1.2717486548939,0.428201047781966,1.55049844505568,2.00146596706261,0.446961094427288,1.74467704820074,0,0,0,0,0,0,0,0.247532705920093,0.331397375727916,0,0,0,0,0.246242116153576,0.204000691244253,0.313454721478088,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,1.80719576192283,0.50133791063589,1.15877215168659,0,2.43317435151318,0.189069634328136,0.221729397462564,0.351339142772504,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.506522046658319,0.397227542439656,6.02356903572509,0.709336764396714,0,0,0,0,0,0,1.66493170409425,0.576175924479999,0,0,0,0,0,0,0,0,0.245668634623536,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0.89694817844431,0.427114777637135,0,0.600182192168805,0.206105058476878,1.54584324027377,0.18611685633159,1.35021065793013,0.779496041289589,0.504867548488229,0.276149695926898,0.484938170456436,2.13005755509969,0.302256294682921,0,0,0,0,0,0,0,0,0,0,1.56449532329816,3.85944562915731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0.613457458595699,0.500170521059677,0.271265023699736,0,0,0,0.117141414992713,0,0,0,0,0,0,2.15381273209015,1.02943027143257,0,0,0,0,0,0,1.48864684691266,0.460385919864187,0.280660094433074,1.92208723883551,1.53512174720011,0.965123526861645,1.48418066444991,0.308419387605311,0.710246901252508,0.164254312027618,0.519254429183621,0.464841513839837,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.096670718292122,0.154048617114644,0,0,0,0.145016693914229,0,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0,0,0,0.37064843820784,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0.136499911407986,0,2.26016233240486,0,0,1.75380354101505,0.578775534266688,0,0,0,0,0,0,0,0,2.11107635297664,1.31717957183961,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.597743964753209,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3671 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6133 | |||
|TSSclassifier=W | |||
|UniProt=O14498 | |||
|association_with_transcript=181bp_to_NM_005545,uc002axg.1_5end | |||
|coexpression_cluster_id=C1751 | |||
|description=CAGE_peak_10_at_ISLR_5end | |||
|id=chr15:74466268..74466273,+ | |||
|ontology_enrichment_celltype=CL:0000057!2.60e-16!75;CL:0002334!5.41e-16!12;CL:0000055!3.05e-13!180;CL:0002620!8.56e-08!23;CL:0000327!3.35e-07!14;CL:0000136!7.36e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000153;1.61e-18;9!CL:0000447;1.61e-18;9!CL:0002575;1.62e-14;2!CL:0000327;4.81e-11;15!CL:0000138;1.28e-10;6!CL:0000346;4.47e-10;3!CL:1000428;4.47e-10;3!CL:0002615;5.60e-10;3!CL:0000214;5.60e-10;3!CL:0002579;1.02e-09;3!CL:0002334;5.96e-09;12!CL:0000136;2.19e-08;13!CL:0002591;2.61e-08;1!CL:0000499;3.32e-08;28!CL:0002581;6.62e-08;1!CL:0002616;6.62e-08;1!CL:0000669;1.08e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.81e-18,9;CL:0000447,1.81e-18,9;CL:0002575,2.89e-14,2;CL:0000327,5.15e-11,15;CL:0000058,1.14e-10,6;CL:0000138,1.14e-10,6;CL:0000346,3.65e-10,3;CL:1000428,3.65e-10,3;CL:0002615,5.74e-10,3;CL:0002579,6.57e-10,3;CL:0000214,7.51e-10,3;CL:0002334,4.93e-09,12;CL:0002591,2.52e-08,1;CL:0000499,3.48e-08,28;CL:0002616,4.40e-08,1;CL:0002581,7.10e-08,1;CL:0000669,1.44e-07,4;CL:0000136,2.76e-07,15;CL:0000057,3.75e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0003124;6.62e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004457!1.44e-11!12;UBERON:0000042!1.44e-11!12;UBERON:0003688!7.75e-10!6;UBERON:0002358!7.75e-10!6;UBERON:0003684!7.75e-10!6;UBERON:0001178!7.75e-10!6;UBERON:0004923!5.02e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;3.00e-26;9!UBERON:0000042;3.00e-26;9!UBERON:0003688;5.51e-18;6!UBERON:0002358;5.51e-18;6!UBERON:0003684;5.51e-18;6!UBERON:0001178;5.51e-18;6!UBERON:0005406;4.03e-14;2!UBERON:0000412;4.47e-10;3!UBERON:0001992;4.47e-10;3!UBERON:0006915;5.60e-10;3!UBERON:0007616;5.60e-10;3!UBERON:0002217;5.60e-10;3!UBERON:0002018;5.60e-10;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004457,1.28e-19,12;UBERON:0000042,1.28e-19,12;UBERON:0003688,3.63e-18,6;UBERON:0002358,3.63e-18,6;UBERON:0003684,3.63e-18,6;UBERON:0001178,3.63e-18,6;UBERON:0005406,2.89e-14,2;UBERON:0000412,3.65e-10,3;UBERON:0001992,3.65e-10,3;UBERON:0006915,7.51e-10,3;UBERON:0007616,7.51e-10,3;UBERON:0002217,7.51e-10,3;UBERON:0002018,7.51e-10,3;UBERON:0004923,1.70e-08,66 | |||
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|short_description=p10@ISLR | |||
}} |
Revision as of 08:13, 11 September 2013
Short description: | p10@ISLR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_ISLR_5end |
Coexpression cluster: | C1751_Mesenchymal_Fibroblast_tenocyte_Smooth_Synoviocyte_Hair_Preadipocyte |
Association with transcript: | 181bp_to_NM_005545, uc002axg.1_5end |
EntrezGene: | ISLR |
HGNC: | 6133 |
UniProt: | O14498 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.81e-18 | 9 |
carbohydrate secreting cell | 1.81e-18 | 9 |
central nervous system pericyte | 2.89e-14 | 2 |
extracellular matrix secreting cell | 5.15e-11 | 15 |
chondroblast | 1.14e-10 | 6 |
chondrocyte | 1.14e-10 | 6 |
hair follicle dermal papilla cell | 3.65e-10 | 3 |
stem cell of epidermis | 3.65e-10 | 3 |
adipocyte of omentum tissue | 5.74e-10 | 3 |
omentum preadipocyte | 6.57e-10 | 3 |
synovial cell | 7.51e-10 | 3 |
preadipocyte | 4.93e-09 | 12 |
smooth muscle cell of the pulmonary artery | 2.52e-08 | 1 |
stromal cell | 3.48e-08 | 28 |
perirenal adipocyte cell | 4.40e-08 | 1 |
perirenal preadipocyte | 7.10e-08 | 1 |
pericyte cell | 1.44e-07 | 4 |
fat cell | 2.76e-07 | 15 |
fibroblast | 3.75e-07 | 76 |
Ontology term | p-value | n |
---|---|---|
cavity lining | 1.28e-19 | 12 |
serous membrane | 1.28e-19 | 12 |
omentum | 3.63e-18 | 6 |
peritoneum | 3.63e-18 | 6 |
abdominal cavity | 3.63e-18 | 6 |
visceral peritoneum | 3.63e-18 | 6 |
perirenal fat | 2.89e-14 | 2 |
dermal papilla | 3.65e-10 | 3 |
papillary layer of dermis | 3.65e-10 | 3 |
stratified squamous epithelium | 7.51e-10 | 3 |
layer of synovial tissue | 7.51e-10 | 3 |
synovial joint | 7.51e-10 | 3 |
synovial membrane of synovial joint | 7.51e-10 | 3 |
organ component layer | 1.70e-08 | 66 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.