FFCP PHASE1:Hg19::chr15:71389222..71389244,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=79875|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25835|TSSclassifier=S|UniProt=Q6ZMP0|association_with_transcript=-46bp_to_ENST00000355327_5end|coexpression_cluster_id=C1694|description=CAGE_peak_3_at_THSD4_5end|id=chr15:71389222..71389244,+|ontology_enrichment_celltype=CL:0002076!3.79e-13!43;CL:0002159!8.17e-12!13;CL:0000066!6.80e-11!254;CL:0002368!1.47e-10!13;CL:0000220!1.64e-10!246;CL:0002321!2.76e-10!248;CL:0000223!1.88e-09!59;CL:0000076!4.19e-08!62;CL:0000244!1.00e-07!4;CL:0000731!1.00e-07!4;CL:0002077!2.45e-07!33;CL:1000306!5.70e-07!4;CL:0002547!5.70e-07!4;CL:0002327!9.54e-07!4|ontology_enrichment_celltype_v019=CL:0000244;1.05e-17;4!CL:0000731;1.05e-17;4!CL:0002159;1.37e-14;14!CL:0002621;8.20e-14;3!CL:0000362;3.62e-12;9!CL:0002076;9.34e-12;42!CL:0000240;1.47e-11;6!CL:0000311;1.47e-11;6!CL:0000079;1.47e-11;6!CL:0000237;1.47e-11;6!CL:0002368;5.17e-11;13!CL:0000317;3.74e-10;2!CL:1000448;3.74e-10;2!CL:0002308;3.74e-10;2!CL:0002140;3.74e-10;2!CL:1000306;1.16e-09;4!CL:0002547;1.16e-09;4!CL:0002327;1.96e-09;4!CL:0000312;2.04e-08;5!CL:0002202;1.45e-07;9!CL:0002632;1.45e-07;9!CL:0002251;6.72e-07;20!CL:0002166;8.59e-07;3|ontology_enrichment_celltype_v019_2=CL:0000244,1.12e-17,4;CL:0000731,1.12e-17,4;CL:0002159,1.25e-14,14;CL:0000066,1.59e-14,253;CL:0002076,5.96e-14,42;CL:0002621,7.71e-14,3;CL:0000362,3.35e-12,9;CL:0000240,1.78e-11,6;CL:0000311,1.78e-11,6;CL:0000079,1.78e-11,6;CL:0000237,1.78e-11,6;CL:0000036,1.78e-11,6;CL:0000357,1.78e-11,6;CL:0000114,1.78e-11,6;CL:0002368,4.44e-11,13;CL:0000317,3.66e-10,2;CL:1000448,3.66e-10,2;CL:0002308,3.66e-10,2;CL:0002140,3.66e-10,2;CL:1000306,1.29e-09,4;CL:0002547,1.29e-09,4;CL:0002327,1.50e-09,4;CL:0000223,2.48e-09,58;CL:0000076,1.61e-08,63;CL:0000312,1.89e-08,5;CL:0002202,1.42e-07,9;CL:0002632,1.42e-07,9;CL:0002077,6.67e-07,34;CL:0002251,7.40e-07,20;CL:0002166,8.36e-07,3|ontology_enrichment_development_v019=CL:0000357;1.47e-11;6!CL:0000114;1.47e-11;6|ontology_enrichment_disease=DOID:1749!1.06e-11!14;DOID:5093!3.32e-07!4;DOID:1612!3.32e-07!4|ontology_enrichment_disease_v019=DOID:1749;2.71e-10;14!DOID:5093;9.37e-10;4!DOID:1612;9.37e-10;4|ontology_enrichment_disease_v019_2=DOID:1749,3.11e-10,14;DOID:5093,6.41e-10,4;DOID:1612,6.41e-10,4|ontology_enrichment_uberon=UBERON:0003102!6.33e-09!95;UBERON:0003729!1.48e-07!5;UBERON:0005153!5.43e-07!37;UBERON:0000415!5.70e-07!4;UBERON:0007240!5.70e-07!4;UBERON:0005742!5.70e-07!4;UBERON:0005734!5.70e-07!4;UBERON:0004664!5.70e-07!4;UBERON:0004663!5.70e-07!4;UBERON:0001911!9.54e-07!4;UBERON:0005333!9.54e-07!4;UBERON:0008425!9.54e-07!4;UBERON:0005311!9.54e-07!4|ontology_enrichment_uberon_v019=UBERON:0000486;6.15e-17;12!UBERON:0000365;3.49e-14;5!UBERON:0001949;8.20e-14;3!UBERON:0005910;7.88e-12;6!UBERON:0002419;3.74e-10;2!UBERON:0007771;3.74e-10;2!UBERON:0003297;3.74e-10;2!UBERON:0001821;3.74e-10;2!UBERON:0003487;3.74e-10;2!UBERON:0001820;3.74e-10;2!UBERON:0004797;1.16e-09;4!UBERON:0000415;1.16e-09;4!UBERON:0007240;1.16e-09;4!UBERON:0005742;1.16e-09;4!UBERON:0005734;1.16e-09;4!UBERON:0004664;1.16e-09;4!UBERON:0004663;1.16e-09;4!UBERON:0001911;1.96e-09;4!UBERON:0003729;7.28e-08;13!UBERON:0010371;9.77e-08;31!UBERON:0001003;3.72e-07;15!UBERON:0007376;3.72e-07;15!UBERON:0000310;8.87e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.68e-14,5;UBERON:0001949,7.71e-14,3;UBERON:0005910,8.23e-12,6;UBERON:0002419,3.66e-10,2;UBERON:0007771,3.66e-10,2;UBERON:0003297,3.66e-10,2;UBERON:0001821,3.66e-10,2;UBERON:0003487,3.66e-10,2;UBERON:0001820,3.66e-10,2;UBERON:0005089,3.66e-10,2;UBERON:0005088,3.66e-10,2;UBERON:0000415,1.29e-09,4;UBERON:0007240,1.29e-09,4;UBERON:0005742,1.29e-09,4;UBERON:0005734,1.29e-09,4;UBERON:0004664,1.29e-09,4;UBERON:0004663,1.29e-09,4;UBERON:0001911,1.50e-09,4;UBERON:0005333,1.50e-09,4;UBERON:0008425,1.50e-09,4;UBERON:0005311,1.50e-09,4;UBERON:0003729,7.80e-08,13;UBERON:0001003,3.56e-07,15;UBERON:0007376,3.56e-07,15;UBERON:0007383,3.56e-07,15;UBERON:0000310,7.60e-07,10|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71085326900425,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,1.39293562831038,3.97227542439656,0.573673241497627,1.41867352879343,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.412210116953756,0,0.18611685633159,0,0.0974370051611986,0.504867548488229,0,0.323292113637624,0,0,0.169560592310488,2.89891279744945,7.0913991353617,10.8985746247821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.23127140564692,3.37205259772859,5.93120937228622,1.01847289674383,0,0,0,0,0.117408694235822,0.144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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=79875 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25835 | |||
|TSSclassifier=S | |||
|UniProt=Q6ZMP0 | |||
|association_with_transcript=-46bp_to_ENST00000355327_5end | |||
|coexpression_cluster_id=C1694 | |||
|description=CAGE_peak_3_at_THSD4_5end | |||
|id=chr15:71389222..71389244,+ | |||
|ontology_enrichment_celltype=CL:0002076!3.79e-13!43;CL:0002159!8.17e-12!13;CL:0000066!6.80e-11!254;CL:0002368!1.47e-10!13;CL:0000220!1.64e-10!246;CL:0002321!2.76e-10!248;CL:0000223!1.88e-09!59;CL:0000076!4.19e-08!62;CL:0000244!1.00e-07!4;CL:0000731!1.00e-07!4;CL:0002077!2.45e-07!33;CL:1000306!5.70e-07!4;CL:0002547!5.70e-07!4;CL:0002327!9.54e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000244;1.05e-17;4!CL:0000731;1.05e-17;4!CL:0002159;1.37e-14;14!CL:0002621;8.20e-14;3!CL:0000362;3.62e-12;9!CL:0002076;9.34e-12;42!CL:0000240;1.47e-11;6!CL:0000311;1.47e-11;6!CL:0000079;1.47e-11;6!CL:0000237;1.47e-11;6!CL:0002368;5.17e-11;13!CL:0000317;3.74e-10;2!CL:1000448;3.74e-10;2!CL:0002308;3.74e-10;2!CL:0002140;3.74e-10;2!CL:1000306;1.16e-09;4!CL:0002547;1.16e-09;4!CL:0002327;1.96e-09;4!CL:0000312;2.04e-08;5!CL:0002202;1.45e-07;9!CL:0002632;1.45e-07;9!CL:0002251;6.72e-07;20!CL:0002166;8.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.12e-17,4;CL:0000731,1.12e-17,4;CL:0002159,1.25e-14,14;CL:0000066,1.59e-14,253;CL:0002076,5.96e-14,42;CL:0002621,7.71e-14,3;CL:0000362,3.35e-12,9;CL:0000240,1.78e-11,6;CL:0000311,1.78e-11,6;CL:0000079,1.78e-11,6;CL:0000237,1.78e-11,6;CL:0000036,1.78e-11,6;CL:0000357,1.78e-11,6;CL:0000114,1.78e-11,6;CL:0002368,4.44e-11,13;CL:0000317,3.66e-10,2;CL:1000448,3.66e-10,2;CL:0002308,3.66e-10,2;CL:0002140,3.66e-10,2;CL:1000306,1.29e-09,4;CL:0002547,1.29e-09,4;CL:0002327,1.50e-09,4;CL:0000223,2.48e-09,58;CL:0000076,1.61e-08,63;CL:0000312,1.89e-08,5;CL:0002202,1.42e-07,9;CL:0002632,1.42e-07,9;CL:0002077,6.67e-07,34;CL:0002251,7.40e-07,20;CL:0002166,8.36e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;1.47e-11;6!CL:0000114;1.47e-11;6 | |||
|ontology_enrichment_disease=DOID:1749!1.06e-11!14;DOID:5093!3.32e-07!4;DOID:1612!3.32e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:1749;2.71e-10;14!DOID:5093;9.37e-10;4!DOID:1612;9.37e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,3.11e-10,14;DOID:5093,6.41e-10,4;DOID:1612,6.41e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0003102!6.33e-09!95;UBERON:0003729!1.48e-07!5;UBERON:0005153!5.43e-07!37;UBERON:0000415!5.70e-07!4;UBERON:0007240!5.70e-07!4;UBERON:0005742!5.70e-07!4;UBERON:0005734!5.70e-07!4;UBERON:0004664!5.70e-07!4;UBERON:0004663!5.70e-07!4;UBERON:0001911!9.54e-07!4;UBERON:0005333!9.54e-07!4;UBERON:0008425!9.54e-07!4;UBERON:0005311!9.54e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000486;6.15e-17;12!UBERON:0000365;3.49e-14;5!UBERON:0001949;8.20e-14;3!UBERON:0005910;7.88e-12;6!UBERON:0002419;3.74e-10;2!UBERON:0007771;3.74e-10;2!UBERON:0003297;3.74e-10;2!UBERON:0001821;3.74e-10;2!UBERON:0003487;3.74e-10;2!UBERON:0001820;3.74e-10;2!UBERON:0004797;1.16e-09;4!UBERON:0000415;1.16e-09;4!UBERON:0007240;1.16e-09;4!UBERON:0005742;1.16e-09;4!UBERON:0005734;1.16e-09;4!UBERON:0004664;1.16e-09;4!UBERON:0004663;1.16e-09;4!UBERON:0001911;1.96e-09;4!UBERON:0003729;7.28e-08;13!UBERON:0010371;9.77e-08;31!UBERON:0001003;3.72e-07;15!UBERON:0007376;3.72e-07;15!UBERON:0000310;8.87e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.68e-14,5;UBERON:0001949,7.71e-14,3;UBERON:0005910,8.23e-12,6;UBERON:0002419,3.66e-10,2;UBERON:0007771,3.66e-10,2;UBERON:0003297,3.66e-10,2;UBERON:0001821,3.66e-10,2;UBERON:0003487,3.66e-10,2;UBERON:0001820,3.66e-10,2;UBERON:0005089,3.66e-10,2;UBERON:0005088,3.66e-10,2;UBERON:0000415,1.29e-09,4;UBERON:0007240,1.29e-09,4;UBERON:0005742,1.29e-09,4;UBERON:0005734,1.29e-09,4;UBERON:0004664,1.29e-09,4;UBERON:0004663,1.29e-09,4;UBERON:0001911,1.50e-09,4;UBERON:0005333,1.50e-09,4;UBERON:0008425,1.50e-09,4;UBERON:0005311,1.50e-09,4;UBERON:0003729,7.80e-08,13;UBERON:0001003,3.56e-07,15;UBERON:0007376,3.56e-07,15;UBERON:0007383,3.56e-07,15;UBERON:0000310,7.60e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.71085326900425,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.728590576585084,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,1.39293562831038,3.97227542439656,0.573673241497627,1.41867352879343,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0.412210116953756,0,0.18611685633159,0,0.0974370051611986,0.504867548488229,0,0.323292113637624,0,0,0.169560592310488,2.89891279744945,7.0913991353617,10.8985746247821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.23127140564692,3.37205259772859,5.93120937228622,1.01847289674383,0,0,0,0,0.117408694235822,0.144366447761074,0,0,0.790204397959275,1.71697232418975,0,0,0,0.93733833986777,5.71139235876122,6.37987937590739,0.268675568108545,1.45316969256981,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.517086863031111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0,0,0.415941723061614,0.892144943985809,0.157702415033935,1.17141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496215615637554,0,0,0.128139149255701,0,0.160853921143607,0,0,0.355123450626254,0.164254312027618,0,0.116210378459959,0,22.2562182036646,0.644566922551274,0.114814448164607,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,22.9706215198469,11.7010844286574,0,0,0,0,0,0,0,0.0852266274161009,0.0890320356467374,1.81813406897076,0.192190067365106,7.65676274967505,0.30347334256665,0,1.25924938732256,0,0,0.532306030317022,0.869932992075073,0.18532421910392,0.143124886741991,0,0.316379424718726,0,0.511795582622668,0,0,0,0,0,0,0.202182481573316,0,0,0,0.731140468893853,0,0.136499911407986,0.282810863907425,0,0,1.99031692572366,0.876901770507525,0,0,0.405820753925408,0,0,0.430234056612155,0.0982490410131212,0,1.06428319221179,0.211107635297664,0,0,0,0.865999014529609,4.02181365321472,4.3556393944529,0,3.01353760869861,6.73885902670502,3.10401107475673,9.87810620889926,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,0,0,2.33748280548102,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0,0,0,0,0,0,5.4689829827899,1.92411999991631,5.07499702804355,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.692552326534174,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0.394584402849391,0,0,0.063186579628488,0,0,0,0,0,0,0,0.277349346026277,0,5.48757425520515,1.04471047896483,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0.160317640503067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0.575745591958336,0,0,0,1.62899880526114,1.72844298240254,0,0,0,1.5334921960688,0,0,0,0,0,0,0,0,0,0,0,0,0,5.10673006216145,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0,0,0.228840068396924,0.604923695052956,0,0,0,0,0,0,0.265841714557995,0.521745061811734,0,1.14241563650639,0.406870733204662,0,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0.231522474323834,0,2.14906609297785,0,0,0.706756583783524,0,0.168942440653073,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0.88332946650923,1.65157612686837,0.733714394086716,0.115525666150338,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,2.14264726326789,42.347384605883,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0.122241444182866,0.406896178315738,0,0,0 | |||
|short_description=p3@THSD4 | |||
}} |
Revision as of 08:06, 11 September 2013
Short description: | p3@THSD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_THSD4_5end |
Coexpression cluster: | C1694_squamous_Prostate_Sebocyte_Gingival_Mallassezderived_clear_Urothelial |
Association with transcript: | -46bp_to_ENST00000355327_5end |
EntrezGene: | THSD4 |
HGNC: | 25835 |
UniProt: | Q6ZMP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urothelium | 3.68e-14 | 5 |
gingival epithelium | 7.71e-14 | 3 |
transitional epithelium | 8.23e-12 | 6 |
skin gland | 3.66e-10 | 2 |
epidermis gland | 3.66e-10 | 2 |
gland of integumental system | 3.66e-10 | 2 |
sebaceous gland | 3.66e-10 | 2 |
skin sebaceous gland | 3.66e-10 | 2 |
sweat gland | 3.66e-10 | 2 |
sweat gland placode | 3.66e-10 | 2 |
sebaceous gland placode | 3.66e-10 | 2 |
artery wall | 1.29e-09 | 4 |
tunica adventitia of artery | 1.29e-09 | 4 |
adventitia | 1.29e-09 | 4 |
tunica adventitia of blood vessel | 1.29e-09 | 4 |
aorta tunica adventitia | 1.29e-09 | 4 |
aorta wall | 1.29e-09 | 4 |
mammary gland | 1.50e-09 | 4 |
mammary bud | 1.50e-09 | 4 |
mammary ridge | 1.50e-09 | 4 |
mammary placode | 1.50e-09 | 4 |
mouth mucosa | 7.80e-08 | 13 |
skin epidermis | 3.56e-07 | 15 |
outer epithelium | 3.56e-07 | 15 |
enveloping layer of ectoderm | 3.56e-07 | 15 |
breast | 7.60e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 3.11e-10 | 14 |
thoracic cancer | 6.41e-10 | 4 |
breast cancer | 6.41e-10 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.