FFCP PHASE1:Hg19::chr15:65042618..65042632,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C188|description=CAGE_peak_at_chr15:65042618..65042632,-|id=chr15:65042618..65042632,-|ontology_enrichment_celltype=CL:0002540!7.35e-08!6|ontology_enrichment_celltype_v019=CL:0002540;4.41e-12;6!CL:0000138;2.80e-08;6!CL:1000507;3.61e-07;10!CL:1000494;3.61e-07;10!CL:0002092;4.05e-07;10|ontology_enrichment_celltype_v019_2=CL:0002540,4.85e-12,6;CL:0000058,3.77e-08,6;CL:0000138,3.77e-08,6;CL:0002092,4.28e-07,10;CL:1000507,6.02e-07,10;CL:1000494,6.02e-07,10|ontology_enrichment_development_v019=UBERON:0005062;3.36e-08;4!UBERON:0007284;3.36e-08;4|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:114;6.44e-08;2|ontology_enrichment_disease_v019_2=DOID:114,6.48e-08,2|ontology_enrichment_uberon=UBERON:0007023!2.74e-20!115;UBERON:0003056!8.78e-09!61;UBERON:0003075!1.46e-08!86;UBERON:0007284!1.46e-08!86;UBERON:0007625!2.89e-08!11;UBERON:0002346!9.43e-08!90;UBERON:0001950!1.12e-07!20;UBERON:0003103!1.37e-07!69;UBERON:0000064!2.87e-07!219|ontology_enrichment_uberon_v019=UBERON:0007100;3.57e-16;25!UBERON:0004151;5.77e-11;3!UBERON:0003978;7.95e-11;3!UBERON:0000946;7.95e-11;3!UBERON:0000948;3.38e-10;22!UBERON:0002081;7.10e-08;2!UBERON:0002133;8.63e-08;2!UBERON:0000488;3.02e-07;4!UBERON:0003103;3.33e-07;61!UBERON:0004211;3.61e-07;10!UBERON:0009773;3.61e-07;10!UBERON:0001231;3.61e-07;10!UBERON:0004810;3.61e-07;10|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.01e-14,27;UBERON:0003103,3.90e-13,68;UBERON:0004151,5.82e-11,3;UBERON:0003978,8.02e-11,3;UBERON:0009751,8.02e-11,3;UBERON:0000946,8.02e-11,3;UBERON:0002523,8.02e-11,3;UBERON:0005983,8.02e-11,3;UBERON:0002165,8.02e-11,3;UBERON:0002062,8.02e-11,3;UBERON:0007280,8.02e-11,3;UBERON:0007023,1.39e-10,114;UBERON:0000948,3.61e-09,24;UBERON:0005498,3.61e-09,24;UBERON:0004140,3.61e-09,24;UBERON:0009881,3.61e-09,24;UBERON:0004141,3.61e-09,24;UBERON:0003084,3.61e-09,24;UBERON:0007005,3.61e-09,24;UBERON:0004139,3.61e-09,24;UBERON:0004291,3.61e-09,24;UBERON:0002081,7.14e-08,2;UBERON:0010227,7.14e-08,2;UBERON:0002133,8.68e-08,2;UBERON:0000488,3.99e-07,4;UBERON:0004810,6.02e-07,10;UBERON:0003127,8.90e-07,2|phase1_expression=0,0,0,0,0,0,0,1.26343974685366,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,1.53531759238885,0.309632246632152,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,0,0.889509253863555,0,0,0,0,0,0,0,0,0,1.12101712596307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0.144824403882799,0,0,0,1.44575660953827,1.00267582127178,3.0417768981773,0.795285947051099,2.43317435151318,0.756278537312543,2.21729397462564,1.14185221401064,0.196468613246569,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12135520028461,0,1.48000529050296,1.24484414159907,0,0,0,0,0,0,0,0,0.117434498643765,0.161872944368132,0.421352420106746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05965950579781,0.600182192168805,0.412210116953756,0,0,0,0.389748020644795,0,0.184099797284599,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0.72995471815166,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,0,0,1.44331342025273,0.811512834825538,0,0,0,0,0,0,0,0.936017060556951,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0.444485260045183,0,0,0,0,0.300343057843917,0,0,0,0,0.129271715757778,0,0,0,0,1.02882949704857,2.83698264046557,0.532844358032199,0,0,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0.718874566474748,0,0,0,0,0,0.784596007954691,0.788123040807709,0.215627574859517,0.513372145118994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.86559496779635,1.00119938235739,1.56869953835371,0,0.105551628892876,0,0,0,0,1.08378575017541,1.00337954770971,0.509752546090077,0.831076008928724,0.223874754722178,0,0.261435451024901,5.12900250232778,0.656029291399411,0.650756789328606,0.515205058238611,0,0,0,0,0,0,0.308097234229289,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27948895655667,0,0,0,0,0.274537029736055,0.117812402345686,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,0.578775534266688,0.655894752046633,0,0.30982349809975,0,0.143411352204052,0.0982490410131212,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0.293016358543788,0,0,0,1.90995587790152,0,0.307160702099232,0,0.281338832821026,0,0,0,0.398495976502139,0,0,0,0,0,0.0898683511473268,0,0,10.7521312144258,0,0,0.969332746095218,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,1.27600463892768,0,0,0,0,0,0.225595660617181,0,0.16782158697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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C188 | |||
|description=CAGE_peak_at_chr15:65042618..65042632,- | |||
|id=chr15:65042618..65042632,- | |||
|ontology_enrichment_celltype=CL:0002540!7.35e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002540;4.41e-12;6!CL:0000138;2.80e-08;6!CL:1000507;3.61e-07;10!CL:1000494;3.61e-07;10!CL:0002092;4.05e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002540,4.85e-12,6;CL:0000058,3.77e-08,6;CL:0000138,3.77e-08,6;CL:0002092,4.28e-07,10;CL:1000507,6.02e-07,10;CL:1000494,6.02e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0005062;3.36e-08;4!UBERON:0007284;3.36e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;6.44e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,6.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.74e-20!115;UBERON:0003056!8.78e-09!61;UBERON:0003075!1.46e-08!86;UBERON:0007284!1.46e-08!86;UBERON:0007625!2.89e-08!11;UBERON:0002346!9.43e-08!90;UBERON:0001950!1.12e-07!20;UBERON:0003103!1.37e-07!69;UBERON:0000064!2.87e-07!219 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;3.57e-16;25!UBERON:0004151;5.77e-11;3!UBERON:0003978;7.95e-11;3!UBERON:0000946;7.95e-11;3!UBERON:0000948;3.38e-10;22!UBERON:0002081;7.10e-08;2!UBERON:0002133;8.63e-08;2!UBERON:0000488;3.02e-07;4!UBERON:0003103;3.33e-07;61!UBERON:0004211;3.61e-07;10!UBERON:0009773;3.61e-07;10!UBERON:0001231;3.61e-07;10!UBERON:0004810;3.61e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.01e-14,27;UBERON:0003103,3.90e-13,68;UBERON:0004151,5.82e-11,3;UBERON:0003978,8.02e-11,3;UBERON:0009751,8.02e-11,3;UBERON:0000946,8.02e-11,3;UBERON:0002523,8.02e-11,3;UBERON:0005983,8.02e-11,3;UBERON:0002165,8.02e-11,3;UBERON:0002062,8.02e-11,3;UBERON:0007280,8.02e-11,3;UBERON:0007023,1.39e-10,114;UBERON:0000948,3.61e-09,24;UBERON:0005498,3.61e-09,24;UBERON:0004140,3.61e-09,24;UBERON:0009881,3.61e-09,24;UBERON:0004141,3.61e-09,24;UBERON:0003084,3.61e-09,24;UBERON:0007005,3.61e-09,24;UBERON:0004139,3.61e-09,24;UBERON:0004291,3.61e-09,24;UBERON:0002081,7.14e-08,2;UBERON:0010227,7.14e-08,2;UBERON:0002133,8.68e-08,2;UBERON:0000488,3.99e-07,4;UBERON:0004810,6.02e-07,10;UBERON:0003127,8.90e-07,2 | |||
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|short_description=p@chr15:65042618..65042632,- | |||
}} |
Revision as of 07:50, 11 September 2013
Short description: | p@chr15:65042618..65042632, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:65042618..65042632, - |
Coexpression cluster: | C188_left_heart_tongue_skeletal_Skeletal_diaphragm_throat |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of the bone marrow | 4.85e-12 | 6 |
chondroblast | 3.77e-08 | 6 |
chondrocyte | 3.77e-08 | 6 |
bone marrow cell | 4.28e-07 | 10 |
kidney tubule cell | 6.02e-07 | 10 |
nephron tubule epithelial cell | 6.02e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.01e-14 | 27 |
compound organ | 3.90e-13 | 68 |
cardiac chamber | 5.82e-11 | 3 |
valve | 8.02e-11 | 3 |
cardiac mesenchyme | 8.02e-11 | 3 |
cardial valve | 8.02e-11 | 3 |
tunica intima | 8.02e-11 | 3 |
heart layer | 8.02e-11 | 3 |
endocardium | 8.02e-11 | 3 |
endocardial cushion | 8.02e-11 | 3 |
presumptive endocardium | 8.02e-11 | 3 |
adult organism | 1.39e-10 | 114 |
heart | 3.61e-09 | 24 |
primitive heart tube | 3.61e-09 | 24 |
primary heart field | 3.61e-09 | 24 |
anterior lateral plate mesoderm | 3.61e-09 | 24 |
heart tube | 3.61e-09 | 24 |
heart primordium | 3.61e-09 | 24 |
cardiac mesoderm | 3.61e-09 | 24 |
cardiogenic plate | 3.61e-09 | 24 |
heart rudiment | 3.61e-09 | 24 |
cardiac atrium | 7.14e-08 | 2 |
future cardiac atrium | 7.14e-08 | 2 |
atrioventricular valve | 8.68e-08 | 2 |
atypical epithelium | 3.99e-07 | 4 |
nephron tubule epithelium | 6.02e-07 | 10 |
open tracheal system trachea | 8.90e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
heart disease | 6.48e-08 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.