FFCP PHASE1:Hg19::chr15:59949667..59949690,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2958|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4647|TSSclassifier=S|UniProt=P52657|association_with_transcript=0bp_to_ENST00000396061,ENST00000472508,ENST00000559141_5end|description=CAGE_peak_2_at_GTF2A2_5end|id=chr15:59949667..59949690,-|ontology_enrichment_celltype=CL:0000037!2.04e-29!172;CL:0000566!2.04e-29!172;CL:0000988!1.09e-28!182;CL:0000012!1.22e-27!682;CL:0002032!1.27e-27!165;CL:0000837!1.27e-27!165;CL:0000003!3.52e-27!722;CL:0000548!4.76e-26!679;CL:0000004!4.76e-26!679;CL:0000255!4.76e-26!679;CL:0000144!1.01e-23!625;CL:0000219!2.09e-22!390;CL:0000134!1.18e-19!358;CL:0000063!5.38e-19!578;CL:0000034!5.81e-19!444;CL:0002320!4.33e-18!365;CL:0000048!5.26e-18!430;CL:0000723!3.02e-17!436;CL:0000763!1.54e-16!112;CL:0000049!1.54e-16!112;CL:0002371!1.68e-16!591;CL:0000738!1.10e-15!140;CL:0002087!7.57e-14!119;CL:0002031!8.08e-14!124;CL:0000542!1.25e-10!53;CL:0000051!1.25e-10!53;CL:0000838!4.14e-10!52;CL:0000945!7.21e-08!24;CL:0000826!7.21e-08!24|ontology_enrichment_celltype_v019=CL:0000945;7.30e-08;24|ontology_enrichment_celltype_v019_2=CL:0000037,2.21e-28,168;CL:0000988,1.35e-27,177;CL:0002032,1.31e-26,161;CL:0000837,1.31e-26,161;CL:0000219,3.73e-21,386;CL:0000134,1.70e-18,354;CL:0000034,2.02e-17,441;CL:0002320,5.57e-17,361;CL:0000048,1.63e-16,427;CL:0000723,8.68e-16,433;CL:0000763,1.16e-15,108;CL:0000049,1.16e-15,108;CL:0000738,7.79e-15,136;CL:0002087,5.10e-13,115;CL:0002031,5.39e-13,120;CL:0000542,1.25e-10,53;CL:0000051,1.25e-10,53;CL:0000838,4.14e-10,52;CL:0000945,7.21e-08,24;CL:0000826,7.21e-08,24|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2531!2.07e-27!51;DOID:0060083!2.07e-27!51;DOID:1240!1.84e-23!39;DOID:8692!8.66e-19!31;DOID:162!4.88e-16!235;DOID:14566!2.94e-15!239;DOID:0050686!2.36e-14!137;DOID:0060058!9.79e-07!10|ontology_enrichment_disease_v019=DOID:1240;2.15e-18;39!DOID:8692;3.19e-18;31!DOID:2531;8.48e-17;51!DOID:0060083;8.48e-17;51!DOID:0060058;8.49e-07;10|ontology_enrichment_disease_v019_2=DOID:2531,2.07e-27,51;DOID:0060083,2.07e-27,51;DOID:1240,1.84e-23,39;DOID:8692,8.66e-19,31;DOID:162,4.89e-16,235;DOID:14566,2.94e-15,239;DOID:0050686,2.40e-14,137;DOID:0060058,9.79e-07,10|ontology_enrichment_uberon=UBERON:0002384!8.44e-18!375;UBERON:0002390!9.95e-08!102;UBERON:0003061!9.95e-08!102;UBERON:0002193!5.65e-07!112|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.07e-16,371;UBERON:0002390,4.79e-07,98;UBERON:0003061,4.79e-07,98|phase1_expression=6.35874327446948,5.35251309727458,7.47058341708647,8.00586386825043,7.59833860526389,12.2127393374052,10.1319951267324,5.05375898741465,1.82829939739887,10.3208253330634,5.58240934377942,5.46103430325431,5.53910654279752,2.35156070624089,5.63375538737457,7.39557661096953,8.43772339233568,5.84248072309899,8.29485757943862,10.2190478203734,8.77202972350288,12.5381888591235,7.44213566540748,11.2237028559765,10.6711243655582,14.9770275265984,18.9652361629375,17.3163718890094,16.1279353508051,15.7370053219857,10.0630480155449,6.43594857135249,4.819294700452,5.54631015250181,30.1347410257373,22.7470771979874,49.912074686924,8.86392653651004,9.6261334785668,8.89744569934992,10.3001118150365,12.6318529747402,14.1666562198803,7.99690313287606,9.06902264853143,8.00527401919793,7.90258725479328,7.81218987241469,5.26500830521676,6.90461741573161,7.68482119587302,8.0403958162119,6.89491361473237,2.5819387343353,6.77132432971709,5.27078550719293,3.27487380069415,5.61808711112712,7.03992952453076,5.1348644332175,1.27867425159808,8.2462825046679,7.77908264724364,8.52449501065388,6.96502172708602,6.80862269629368,3.73693349397345,7.5374599577023,5.21482918420201,5.2125322729228,6.05399502633369,5.89244217580104,5.69632297393592,17.3229334775792,19.346991296819,18.0306435137203,13.1424498441399,18.9222884980298,8.83990726833941,18.8108410869224,15.9133341759272,13.1518190710536,21.1195493353587,16.9302969491261,18.6796943311347,12.3751764544287,11.2110876370083,16.0930683187255,12.5598525829124,19.0810750907073,3.98449078376614,4.11066032559657,4.58727873750275,17.1822727152734,9.52864557068611,30.815937918684,5.11445402295966,4.71612915298998,4.5232329779892,6.35308682484577,6.8443675993054,2.8406868344084,5.84480185223734,13.5920757399912,7.65975359434577,10.1905591508466,5.41607727530031,10.3753968977797,11.705341280389,13.9772218913125,11.8830507647915,11.302320343667,1.92772532110679,2.67540828089713,2.09071047609954,13.1438837529177,5.74830740402882,8.59068613706575,5.81945291644857,7.96413535810242,16.2770863464105,14.2567806667256,9.63680762097746,9.34302261427254,9.99445812418767,11.6020853501568,17.243687935342,5.84659555351724,8.02320587350522,5.79297615531196,2.43806866313962,10.7312137552582,5.62595272111533,10.1202962667679,1.00267582127178,6.66293987219789,5.5670016293577,6.32625331393427,6.23929793282848,7.31707011626461,6.32410456990508,4.91171533116422,5.10013403609559,4.82019775619758,60.6903626134258,51.5424022405831,50.9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38630016486,7.28997916430815,9.70423302570136,11.6376796973363,7.53546503524896,7.80769637788516,1.2754495206101,4.21381598480607,3.35186950783946,6.04208266241495,18.8479570552995,16.0114149657094,8.46422264857641,11.6373281394216,1.34881372702565,2.8339315265117,1.59633859057151,1.23069818544453,2.7727886584389,1.52145955421279,1.13032951942296,1.42769420259154,12.8573511236344,3.77503114712769,5.31942935712869,9.24205329202706,5.33934933654034,4.8325194824207,34.014673981883,2.78278214892252,8.87502302295488,3.90757005616546,16.2382150578482,7.20596437044426,7.39280431085226,1.2832141077495,0,2.27355476151302,1.20490039368423,3.28184885410932,4.38606213485746,1.48863353516788,1.93458368795583,9.83770692824884,6.96412386641773,3.02655349996942,6.06965604236632,1.82129753081038,3.28198769601764,17.2850981333669,4.6301762548103,1.56330385846713,1.18390992413128,12.0557717701648,6.34018990784794,2.35479278551542,1.41404030924402,6.16598759290336,4.56579360254748,9.28488642240072,3.34426181520935,2.35872595782966,18.6456061844617,2.78979420883501,4.17259853526191,0,1.45051314914126,1.0243108625637,1.38251932362818,1.72090943528111,5.44327203360601,6.0501517379002,2.11693525095465,6.4149923192334,7.13474687027936,8.5998504507969,4.58607270370949,6.57606565222128,5.24247077423759,0.647428837187895,2.46390736454993,5.799072156691,2.91426595835484,15.2060651250369,9.54963720774568,2.97300226943921,25.1869762946881,2.30875085165401,9.96354767540045,2.08370226891451,6.55678681511872,8.93602863086893,0.735444965261716,2.12108892391463,3.14093547383912,4.75274240523338,3.8039015482506,5.43766767001014,10.1502631418242,6.31687302141056,22.0869954594093,2.67830907908486,7.41079230602953,13.0793427703344,2.19100916473955,3.21110498383179,2.29343333042322,14.3572121595798,1.08786384305464,3.9271562130634,1.0580536810308,6.69591032700152,7.85698568673411,3.8936390591141,11.228811810322,24.6940192637952,18.2445841456469,10.3008718039402,7.21486994217013,5.05421947441647,8.022641257356,13.2612721881919,19.8293456315572,8.29169439458779,2.89612388413307,2.55880778281177,5.71354635512977,6.52347989343662,5.83502314381064,10.2039994948358,2.22765053973577,3.63810940124795,3.04803447055746,5.4757328173645,5.32081218815241,4.73366555591664,6.32054677437425,19.048364854968,4.26909383510862,5.7921684686082,10.9586746570036,0,2.07810455110873,6.91723503136755,0.665756774185513,5.23311863336668,19.234109538194|short_description=p2@GTF2A2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=2958 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4647 | |||
|TSSclassifier=S | |||
|UniProt=P52657 | |||
|association_with_transcript=0bp_to_ENST00000396061,ENST00000472508,ENST00000559141_5end | |||
|description=CAGE_peak_2_at_GTF2A2_5end | |||
|id=chr15:59949667..59949690,- | |||
|ontology_enrichment_celltype=CL:0000037!2.04e-29!172;CL:0000566!2.04e-29!172;CL:0000988!1.09e-28!182;CL:0000012!1.22e-27!682;CL:0002032!1.27e-27!165;CL:0000837!1.27e-27!165;CL:0000003!3.52e-27!722;CL:0000548!4.76e-26!679;CL:0000004!4.76e-26!679;CL:0000255!4.76e-26!679;CL:0000144!1.01e-23!625;CL:0000219!2.09e-22!390;CL:0000134!1.18e-19!358;CL:0000063!5.38e-19!578;CL:0000034!5.81e-19!444;CL:0002320!4.33e-18!365;CL:0000048!5.26e-18!430;CL:0000723!3.02e-17!436;CL:0000763!1.54e-16!112;CL:0000049!1.54e-16!112;CL:0002371!1.68e-16!591;CL:0000738!1.10e-15!140;CL:0002087!7.57e-14!119;CL:0002031!8.08e-14!124;CL:0000542!1.25e-10!53;CL:0000051!1.25e-10!53;CL:0000838!4.14e-10!52;CL:0000945!7.21e-08!24;CL:0000826!7.21e-08!24 | |||
|ontology_enrichment_celltype_v019=CL:0000945;7.30e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.21e-28,168;CL:0000988,1.35e-27,177;CL:0002032,1.31e-26,161;CL:0000837,1.31e-26,161;CL:0000219,3.73e-21,386;CL:0000134,1.70e-18,354;CL:0000034,2.02e-17,441;CL:0002320,5.57e-17,361;CL:0000048,1.63e-16,427;CL:0000723,8.68e-16,433;CL:0000763,1.16e-15,108;CL:0000049,1.16e-15,108;CL:0000738,7.79e-15,136;CL:0002087,5.10e-13,115;CL:0002031,5.39e-13,120;CL:0000542,1.25e-10,53;CL:0000051,1.25e-10,53;CL:0000838,4.14e-10,52;CL:0000945,7.21e-08,24;CL:0000826,7.21e-08,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2531!2.07e-27!51;DOID:0060083!2.07e-27!51;DOID:1240!1.84e-23!39;DOID:8692!8.66e-19!31;DOID:162!4.88e-16!235;DOID:14566!2.94e-15!239;DOID:0050686!2.36e-14!137;DOID:0060058!9.79e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.15e-18;39!DOID:8692;3.19e-18;31!DOID:2531;8.48e-17;51!DOID:0060083;8.48e-17;51!DOID:0060058;8.49e-07;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,2.07e-27,51;DOID:0060083,2.07e-27,51;DOID:1240,1.84e-23,39;DOID:8692,8.66e-19,31;DOID:162,4.89e-16,235;DOID:14566,2.94e-15,239;DOID:0050686,2.40e-14,137;DOID:0060058,9.79e-07,10 | |||
|ontology_enrichment_uberon=UBERON:0002384!8.44e-18!375;UBERON:0002390!9.95e-08!102;UBERON:0003061!9.95e-08!102;UBERON:0002193!5.65e-07!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.07e-16,371;UBERON:0002390,4.79e-07,98;UBERON:0003061,4.79e-07,98 | |||
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| |||
|short_description=p2@GTF2A2 | |||
}} |
Revision as of 07:41, 11 September 2013
Short description: | p2@GTF2A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_GTF2A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000396061, ENST00000472508, ENST00000559141_5end |
EntrezGene: | GTF2A2 |
HGNC: | 4647 |
UniProt: | P52657 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.21e-28 | 168 |
hematopoietic cell | 1.35e-27 | 177 |
hematopoietic oligopotent progenitor cell | 1.31e-26 | 161 |
hematopoietic multipotent progenitor cell | 1.31e-26 | 161 |
motile cell | 3.73e-21 | 386 |
mesenchymal cell | 1.70e-18 | 354 |
stem cell | 2.02e-17 | 441 |
connective tissue cell | 5.57e-17 | 361 |
multi fate stem cell | 1.63e-16 | 427 |
somatic stem cell | 8.68e-16 | 433 |
myeloid cell | 1.16e-15 | 108 |
common myeloid progenitor | 1.16e-15 | 108 |
leukocyte | 7.79e-15 | 136 |
nongranular leukocyte | 5.10e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 5.39e-13 | 120 |
lymphocyte | 1.25e-10 | 53 |
common lymphoid progenitor | 1.25e-10 | 53 |
lymphoid lineage restricted progenitor cell | 4.14e-10 | 52 |
lymphocyte of B lineage | 7.21e-08 | 24 |
pro-B cell | 7.21e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.07e-16 | 371 |
hematopoietic system | 4.79e-07 | 98 |
blood island | 4.79e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.07e-27 | 51 |
immune system cancer | 2.07e-27 | 51 |
leukemia | 1.84e-23 | 39 |
myeloid leukemia | 8.66e-19 | 31 |
cancer | 4.89e-16 | 235 |
disease of cellular proliferation | 2.94e-15 | 239 |
organ system cancer | 2.40e-14 | 137 |
lymphoma | 9.79e-07 | 10 |
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