FFCP PHASE1:Hg19::chr15:42696918..42696927,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=825|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=1480|TSSclassifier=S|UniProt=Q9BQC8,P20807,A4FTZ9|association_with_transcript=-49bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end|coexpression_cluster_id=C701|description=CAGE_peak_9_at_CAPN3_5end|id=chr15:42696918..42696927,+|ontology_enrichment_celltype=CL:0000148!5.31e-18!10;CL:0000541!5.31e-18!10;CL:0000147!2.22e-15!14;CL:0002274!1.73e-13!5;CL:0000457!1.73e-13!5;CL:0002191!1.73e-13!5;CL:0000097!1.73e-13!5;CL:0000831!1.73e-13!5;CL:0002028!1.73e-13!5;CL:0002567!1.48e-08!3;CL:0000710!4.53e-08!20;CL:0000163!2.99e-07!9;CL:0002619!3.27e-07!3|ontology_enrichment_celltype_v019=CL:0000097;4.32e-20;5!CL:0002567;4.80e-18;3!CL:0000163;3.19e-11;9!CL:0000147;3.25e-10;14!CL:0000148;1.71e-09;10|ontology_enrichment_celltype_v019_2=CL:0000097,2.74e-20,5;CL:0002028,2.74e-20,5;CL:0002567,2.67e-18,3;CL:0000163,2.49e-11,9;CL:0000147,2.41e-10,14;CL:0000148,1.19e-09,10;CL:0000541,1.19e-09,10|ontology_enrichment_development_v019=UBERON:0006601;5.82e-08;82!UBERON:0006222;3.84e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.41e-54!57;UBERON:0005068!1.41e-54!57;UBERON:0006241!1.41e-54!57;UBERON:0007135!1.41e-54!57;UBERON:0005743!8.57e-47!86;UBERON:0001017!8.85e-45!82;UBERON:0002616!1.00e-43!59;UBERON:0007023!3.98e-43!115;UBERON:0000955!2.56e-42!69;UBERON:0006238!2.56e-42!69;UBERON:0000073!3.29e-41!94;UBERON:0001016!3.29e-41!94;UBERON:0003075!1.30e-40!86;UBERON:0007284!1.30e-40!86;UBERON:0002780!1.55e-38!41;UBERON:0001890!1.55e-38!41;UBERON:0006240!1.55e-38!41;UBERON:0002346!2.83e-38!90;UBERON:0003080!1.93e-37!42;UBERON:0002020!3.81e-31!34;UBERON:0003528!3.81e-31!34;UBERON:0001893!4.04e-31!34;UBERON:0002791!2.77e-29!33;UBERON:0003056!1.88e-27!61;UBERON:0001869!5.11e-27!32;UBERON:0000033!1.32e-24!123;UBERON:0002619!2.85e-23!22;UBERON:0000153!6.35e-23!129;UBERON:0007811!6.35e-23!129;UBERON:0001950!1.16e-22!20;UBERON:0004121!7.09e-21!169;UBERON:0000924!4.23e-20!173;UBERON:0006601!4.23e-20!173;UBERON:0000956!4.51e-20!25;UBERON:0000203!4.51e-20!25;UBERON:0003076!7.10e-18!15;UBERON:0003057!7.10e-18!15;UBERON:0002298!2.02e-15!8;UBERON:0000200!2.03e-14!6;UBERON:0002308!5.63e-13!9;UBERON:0000125!5.63e-13!9;UBERON:0004733!3.84e-12!12;UBERON:0002028!3.84e-12!12;UBERON:0007277!3.84e-12!12;UBERON:0000025!1.81e-11!194;UBERON:0004732!4.37e-11!13;UBERON:0002420!2.65e-09!9;UBERON:0007245!2.65e-09!9;UBERON:0010009!2.65e-09!9;UBERON:0010011!2.65e-09!9;UBERON:0000454!2.65e-09!9;UBERON:0001894!8.68e-09!7;UBERON:0009663!8.68e-09!7;UBERON:0006222!8.68e-09!7;UBERON:0006331!1.10e-08!3;UBERON:0001896!1.48e-08!3;UBERON:0005290!1.48e-08!3;UBERON:0010096!1.48e-08!3;UBERON:0000988!1.64e-08!3;UBERON:0001872!2.74e-08!5;UBERON:0002240!4.89e-08!3;UBERON:0002771!7.16e-08!3;UBERON:0004111!8.72e-08!241;UBERON:0000483!1.57e-07!309;UBERON:0000062!1.90e-07!511;UBERON:0000119!2.41e-07!312;UBERON:0001871!2.63e-07!7|ontology_enrichment_uberon_v019=UBERON:0002298;2.38e-24;6!UBERON:0003528;2.32e-22;34!UBERON:0002020;2.32e-22;34!UBERON:0000073;7.60e-21;53!UBERON:0002616;7.60e-21;53!UBERON:0001893;4.69e-19;34!UBERON:0000988;4.80e-18;3!UBERON:0002780;1.75e-17;41!UBERON:0001890;1.75e-17;41!UBERON:0001950;1.60e-16;20!UBERON:0000125;1.90e-16;9!UBERON:0002308;1.90e-16;9!UBERON:0002791;3.35e-16;32!UBERON:0002619;5.48e-15;22!UBERON:0001869;1.99e-13;32!UBERON:0000956;3.99e-13;25!UBERON:0000203;3.99e-13;25!UBERON:0002148;1.29e-12;2!UBERON:0006331;1.29e-12;2!UBERON:0009662;1.29e-12;2!UBERON:0004733;4.28e-12;12!UBERON:0002028;4.28e-12;12!UBERON:0001017;4.63e-12;75!UBERON:0004732;3.78e-11;13!UBERON:0001016;4.73e-11;83!UBERON:0001872;4.78e-11;5!UBERON:0000955;1.92e-10;68!UBERON:0000200;2.75e-09;6!UBERON:0001896;6.07e-09;3!UBERON:0005290;6.07e-09;3!UBERON:0001870;1.05e-08;3!UBERON:0009663;2.24e-08;7!UBERON:0002336;1.23e-07;1!UBERON:0002038;1.23e-07;1!UBERON:0011215;1.23e-07;1!UBERON:0001018;1.23e-07;1!UBERON:0009661;1.23e-07;1!UBERON:0002950;1.23e-07;1!UBERON:0002473;1.23e-07;1!UBERON:0005340;1.23e-07;1!UBERON:0003544;1.23e-07;1!UBERON:0005970;1.23e-07;1!UBERON:0002316;1.23e-07;1!UBERON:0001020;1.23e-07;1!UBERON:0001891;1.23e-07;1!UBERON:0002437;1.23e-07;1!UBERON:0002581;3.84e-07;1!UBERON:0001874;3.84e-07;1!UBERON:0003112;3.84e-07;1!UBERON:0011158;3.84e-07;1!UBERON:0003128;3.84e-07;1!UBERON:0001703;3.84e-07;1!UBERON:0002241;3.84e-07;1!UBERON:0007023;6.56e-07;114|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.90e-37,56;UBERON:0005068,3.90e-37,56;UBERON:0006241,3.90e-37,56;UBERON:0007135,3.90e-37,56;UBERON:0000073,2.79e-35,53;UBERON:0002616,2.79e-35,53;UBERON:0000955,1.95e-29,68;UBERON:0006238,1.95e-29,68;UBERON:0001017,5.87e-27,81;UBERON:0003075,7.09e-27,82;UBERON:0007284,7.09e-27,82;UBERON:0002346,1.94e-25,86;UBERON:0003528,2.18e-25,34;UBERON:0002020,2.18e-25,34;UBERON:0002298,1.09e-24,6;UBERON:0002780,1.71e-24,41;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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=825 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |||
|TSSclassifier=S | |||
|UniProt=Q9BQC8,P20807,A4FTZ9 | |||
|association_with_transcript=-49bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | |||
|coexpression_cluster_id=C701 | |||
|description=CAGE_peak_9_at_CAPN3_5end | |||
|id=chr15:42696918..42696927,+ | |||
|ontology_enrichment_celltype=CL:0000148!5.31e-18!10;CL:0000541!5.31e-18!10;CL:0000147!2.22e-15!14;CL:0002274!1.73e-13!5;CL:0000457!1.73e-13!5;CL:0002191!1.73e-13!5;CL:0000097!1.73e-13!5;CL:0000831!1.73e-13!5;CL:0002028!1.73e-13!5;CL:0002567!1.48e-08!3;CL:0000710!4.53e-08!20;CL:0000163!2.99e-07!9;CL:0002619!3.27e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;4.32e-20;5!CL:0002567;4.80e-18;3!CL:0000163;3.19e-11;9!CL:0000147;3.25e-10;14!CL:0000148;1.71e-09;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.74e-20,5;CL:0002028,2.74e-20,5;CL:0002567,2.67e-18,3;CL:0000163,2.49e-11,9;CL:0000147,2.41e-10,14;CL:0000148,1.19e-09,10;CL:0000541,1.19e-09,10 | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.82e-08;82!UBERON:0006222;3.84e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p9@CAPN3 | |||
}} |
Revision as of 07:01, 11 September 2013
Short description: | p9@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_CAPN3_5end |
Coexpression cluster: | C701_Mast_thalamus_globus_middle_substantia_corpus_medial |
Association with transcript: | -49bp_to_ENST00000337571, ENST00000397204, NM_173089, NM_173090, uc001zpr.1, uc001zps.1, uc001zpt.1, uc010bcv.1_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | Q9BQC8P20807A4FTZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.74e-20 | 5 |
basophil mast progenitor cell | 2.74e-20 | 5 |
light melanocyte | 2.67e-18 | 3 |
endocrine cell | 2.49e-11 | 9 |
pigment cell | 2.41e-10 | 14 |
melanocyte | 1.19e-09 | 10 |
melanoblast | 1.19e-09 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.