FFCP PHASE1:Hg19::chr15:33147354..33147359,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr15:33147354..33147359,-|id=chr15:33147354..33147359,-|ontology_enrichment_celltype=CL:0000557!1.95e-12!71;CL:0000839!8.14e-12!70;CL:0002009!3.35e-10!65;CL:0002194!5.76e-10!63;CL:0000576!5.76e-10!63;CL:0000040!5.76e-10!63;CL:0000559!5.76e-10!63;CL:0000766!9.18e-10!76;CL:0002057!1.48e-09!42;CL:0000860!2.74e-08!45|ontology_enrichment_celltype_v019=CL:0002619;4.87e-09;3!CL:0000319;3.40e-07;1|ontology_enrichment_celltype_v019_2=CL:0002619,3.77e-09,3;CL:0000557,1.65e-08,67;CL:0002009,7.88e-08,61;CL:0000319,2.84e-07,1;CL:0000839,4.24e-07,66|ontology_enrichment_development_v019=UBERON:0005425;3.40e-07;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3030;3.40e-07;1!DOID:6193;3.40e-07;1|ontology_enrichment_disease_v019_2=DOID:6193,1.54e-07,1;DOID:3030,2.84e-07,1|ontology_enrichment_uberon=UBERON:0007023!1.96e-15!115;UBERON:0000062!1.15e-11!511;UBERON:0002371!2.10e-09!80;UBERON:0001474!2.28e-09!86;UBERON:0004765!1.17e-08!101;UBERON:0001434!1.17e-08!101;UBERON:0000955!1.65e-08!69;UBERON:0006238!1.65e-08!69;UBERON:0002780!3.83e-08!41;UBERON:0001890!3.83e-08!41;UBERON:0006240!3.83e-08!41;UBERON:0000468!4.46e-08!659;UBERON:0001049!5.30e-08!57;UBERON:0005068!5.30e-08!57;UBERON:0006241!5.30e-08!57;UBERON:0007135!5.30e-08!57;UBERON:0002020!6.23e-08!34;UBERON:0003528!6.23e-08!34;UBERON:0002616!7.79e-08!59;UBERON:0000480!8.78e-08!626;UBERON:0003080!9.42e-08!42;UBERON:0000073!9.77e-08!94;UBERON:0001016!9.77e-08!94;UBERON:0000467!1.78e-07!625;UBERON:0002619!2.01e-07!22;UBERON:0001893!2.04e-07!34;UBERON:0001950!2.20e-07!20;UBERON:0002791!3.79e-07!33;UBERON:0002390!4.54e-07!102;UBERON:0003061!4.54e-07!102;UBERON:0000956!6.37e-07!25;UBERON:0000203!6.37e-07!25;UBERON:0005743!7.55e-07!86|ontology_enrichment_uberon_v019=UBERON:0002134;1.31e-07;1!UBERON:0005208;1.31e-07;1!UBERON:0004145;1.31e-07;1!UBERON:0005946;1.31e-07;1!UBERON:0005965;1.31e-07;1!UBERON:0002078;1.31e-07;1!UBERON:0000941;3.40e-07;1!UBERON:0002171;3.40e-07;1!UBERON:0001785;3.40e-07;1!UBERON:0002464;3.40e-07;1!UBERON:0004904;3.40e-07;1!UBERON:0001021;3.40e-07;1!UBERON:0006518;3.40e-07;1!UBERON:0008949;3.40e-07;1!UBERON:0000101;3.40e-07;1!UBERON:0002167;3.40e-07;1!UBERON:0003296;8.82e-07;4!UBERON:0010133;8.82e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.20e-07,1;UBERON:0005208,1.20e-07,1;UBERON:0005946,1.20e-07,1;UBERON:0005965,1.20e-07,1;UBERON:0002078,1.20e-07,1;UBERON:0002371,2.77e-07,76;UBERON:0000941,3.02e-07,1;UBERON:0001785,3.02e-07,1;UBERON:0002464,3.02e-07,1;UBERON:0004904,3.02e-07,1;UBERON:0001021,3.02e-07,1;UBERON:0003902,3.02e-07,1;UBERON:0005425,3.02e-07,1;UBERON:0002171,4.08e-07,1;UBERON:0006518,4.08e-07,1;UBERON:0008949,4.08e-07,1;UBERON:0000101,4.08e-07,1;UBERON:0002167,4.08e-07,1;UBERON:0003296,9.38e-07,4;UBERON:0010133,9.38e-07,4|phase1_expression=0.181678379270557,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.217010870715852,1.56740831967947,0.971680998056939,2.83333124397605,0.436194716338694,0.377875943688809,0.485168122375632,0.697287110717054,0.822335776043652,0.929119112685311,0.863077176966451,0.512321413058201,0.236482229888585,0.344745680736619,0,0,0.188242339542605,1.09162460023138,0.224723484445085,0.612167784741805,0.320929027076094,1.27867425159808,0.329851300186716,0,0.426224750532694,0.580418477257168,0.56738522469114,0.622822248995575,0.502497330513487,1.0429658368404,0,2.42159801053347,1.10483290796269,0.632924774881769,0,0,0,0.22465726229299,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0.786021525498329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0.113309342697566,0,0,0,0,0.651083453856419,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.43917392846563,0.327447688744282,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0,0,0.151357427644931,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0.61246251376468,0.737005903870608,0,0,0,0,0,0.336672227908132,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0,0.423863802319124,1.80054657650641,0.206105058476878,0.257640540045629,0,1.18143432568886,0.292311015483596,2.77677151668526,0.368199594569197,0,1.42003837006646,0.302256294682921,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72351904261178,0.234004265139238,0.743155811443641,0,0,0,0,0,0,0.492663237895943,0.528290604079356,0.621984346622316,0.864719720501769,1.38866676769018,0.126995788584338,1.52795370223311,0,0,0,0,1.14330573052231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0.502257091432126,4.21667878966063,0.2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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr15:33147354..33147359,- | |||
|id=chr15:33147354..33147359,- | |||
|ontology_enrichment_celltype=CL:0000557!1.95e-12!71;CL:0000839!8.14e-12!70;CL:0002009!3.35e-10!65;CL:0002194!5.76e-10!63;CL:0000576!5.76e-10!63;CL:0000040!5.76e-10!63;CL:0000559!5.76e-10!63;CL:0000766!9.18e-10!76;CL:0002057!1.48e-09!42;CL:0000860!2.74e-08!45 | |||
|ontology_enrichment_celltype_v019=CL:0002619;4.87e-09;3!CL:0000319;3.40e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002619,3.77e-09,3;CL:0000557,1.65e-08,67;CL:0002009,7.88e-08,61;CL:0000319,2.84e-07,1;CL:0000839,4.24e-07,66 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.40e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;3.40e-07;1!DOID:6193;3.40e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.54e-07,1;DOID:3030,2.84e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.96e-15!115;UBERON:0000062!1.15e-11!511;UBERON:0002371!2.10e-09!80;UBERON:0001474!2.28e-09!86;UBERON:0004765!1.17e-08!101;UBERON:0001434!1.17e-08!101;UBERON:0000955!1.65e-08!69;UBERON:0006238!1.65e-08!69;UBERON:0002780!3.83e-08!41;UBERON:0001890!3.83e-08!41;UBERON:0006240!3.83e-08!41;UBERON:0000468!4.46e-08!659;UBERON:0001049!5.30e-08!57;UBERON:0005068!5.30e-08!57;UBERON:0006241!5.30e-08!57;UBERON:0007135!5.30e-08!57;UBERON:0002020!6.23e-08!34;UBERON:0003528!6.23e-08!34;UBERON:0002616!7.79e-08!59;UBERON:0000480!8.78e-08!626;UBERON:0003080!9.42e-08!42;UBERON:0000073!9.77e-08!94;UBERON:0001016!9.77e-08!94;UBERON:0000467!1.78e-07!625;UBERON:0002619!2.01e-07!22;UBERON:0001893!2.04e-07!34;UBERON:0001950!2.20e-07!20;UBERON:0002791!3.79e-07!33;UBERON:0002390!4.54e-07!102;UBERON:0003061!4.54e-07!102;UBERON:0000956!6.37e-07!25;UBERON:0000203!6.37e-07!25;UBERON:0005743!7.55e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;1.31e-07;1!UBERON:0005208;1.31e-07;1!UBERON:0004145;1.31e-07;1!UBERON:0005946;1.31e-07;1!UBERON:0005965;1.31e-07;1!UBERON:0002078;1.31e-07;1!UBERON:0000941;3.40e-07;1!UBERON:0002171;3.40e-07;1!UBERON:0001785;3.40e-07;1!UBERON:0002464;3.40e-07;1!UBERON:0004904;3.40e-07;1!UBERON:0001021;3.40e-07;1!UBERON:0006518;3.40e-07;1!UBERON:0008949;3.40e-07;1!UBERON:0000101;3.40e-07;1!UBERON:0002167;3.40e-07;1!UBERON:0003296;8.82e-07;4!UBERON:0010133;8.82e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002134,1.20e-07,1;UBERON:0005208,1.20e-07,1;UBERON:0005946,1.20e-07,1;UBERON:0005965,1.20e-07,1;UBERON:0002078,1.20e-07,1;UBERON:0002371,2.77e-07,76;UBERON:0000941,3.02e-07,1;UBERON:0001785,3.02e-07,1;UBERON:0002464,3.02e-07,1;UBERON:0004904,3.02e-07,1;UBERON:0001021,3.02e-07,1;UBERON:0003902,3.02e-07,1;UBERON:0005425,3.02e-07,1;UBERON:0002171,4.08e-07,1;UBERON:0006518,4.08e-07,1;UBERON:0008949,4.08e-07,1;UBERON:0000101,4.08e-07,1;UBERON:0002167,4.08e-07,1;UBERON:0003296,9.38e-07,4;UBERON:0010133,9.38e-07,4 | |||
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| |||
|short_description=p@chr15:33147354..33147359,- | |||
}} |
Revision as of 06:36, 11 September 2013
Short description: | p@chr15:33147354..33147359, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr15:33147354..33147359, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult endothelial progenitor cell | 3.77e-09 | 3 |
granulocyte monocyte progenitor cell | 1.65e-08 | 67 |
macrophage dendritic cell progenitor | 7.88e-08 | 61 |
mucus secreting cell | 2.84e-07 | 1 |
myeloid lineage restricted progenitor cell | 4.24e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
tricuspid valve | 1.20e-07 | 1 |
right atrium valve | 1.20e-07 | 1 |
outflow tract of atrium | 1.20e-07 | 1 |
outflow part of right atrium | 1.20e-07 | 1 |
right cardiac atrium | 1.20e-07 | 1 |
bone marrow | 2.77e-07 | 76 |
cranial nerve II | 3.02e-07 | 1 |
cranial nerve | 3.02e-07 | 1 |
nerve trunk | 3.02e-07 | 1 |
nerve connecting eye with brain | 3.02e-07 | 1 |
nerve | 3.02e-07 | 1 |
retinal neural layer | 3.02e-07 | 1 |
presumptive neural retina | 3.02e-07 | 1 |
lower lobe of right lung | 4.08e-07 | 1 |
right lung lobe | 4.08e-07 | 1 |
lower lobe of lung | 4.08e-07 | 1 |
lobe of lung | 4.08e-07 | 1 |
right lung | 4.08e-07 | 1 |
gland of diencephalon | 9.38e-07 | 4 |
neuroendocrine gland | 9.38e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.54e-07 | 1 |
mucinous adenocarcinoma | 2.84e-07 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.