FFCP PHASE1:Hg19::chr15:31618889..31618902,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=51621|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=13672|TSSclassifier=S|UniProt=Q9Y2Y9|association_with_transcript=-155bp_to_ENST00000307145_5end|description=CAGE_peak_15_at_KLF13_5end|id=chr15:31618889..31618902,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;2.40e-08;2!CL:0000558;2.40e-08;2|ontology_enrichment_celltype_v019_2=CL:0000764,9.70e-09,2;CL:0000765,9.70e-09,2;CL:0000050,9.70e-09,2;CL:0000038,9.70e-09,2;CL:0000558,9.70e-09,2;CL:0000547,9.70e-09,2;CL:0000549,9.70e-09,2;CL:0000550,9.70e-09,2;CL:0000552,9.70e-09,2|ontology_enrichment_development_v019=UBERON:0006601;1.61e-10;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.31e-34!115;UBERON:0001017!4.59e-23!82;UBERON:0001049!8.29e-22!57;UBERON:0005068!8.29e-22!57;UBERON:0006241!8.29e-22!57;UBERON:0007135!8.29e-22!57;UBERON:0005743!1.12e-21!86;UBERON:0002616!1.91e-20!59;UBERON:0000955!2.79e-20!69;UBERON:0006238!2.79e-20!69;UBERON:0000073!5.87e-20!94;UBERON:0001016!5.87e-20!94;UBERON:0002346!1.03e-17!90;UBERON:0000924!5.24e-17!173;UBERON:0006601!5.24e-17!173;UBERON:0003075!6.39e-17!86;UBERON:0007284!6.39e-17!86;UBERON:0002780!9.77e-17!41;UBERON:0001890!9.77e-17!41;UBERON:0006240!9.77e-17!41;UBERON:0004121!3.20e-16!169;UBERON:0003080!6.04e-16!42;UBERON:0001893!1.23e-15!34;UBERON:0002020!4.55e-15!34;UBERON:0003528!4.55e-15!34;UBERON:0002791!7.03e-15!33;UBERON:0001869!1.93e-14!32;UBERON:0000153!3.97e-14!129;UBERON:0007811!3.97e-14!129;UBERON:0000033!1.46e-13!123;UBERON:0003056!1.71e-10!61;UBERON:0000956!5.26e-10!25;UBERON:0000203!5.26e-10!25;UBERON:0001950!3.26e-09!20;UBERON:0002619!4.00e-09!22;UBERON:0000468!1.55e-07!659;UBERON:0002420!2.72e-07!9;UBERON:0007245!2.72e-07!9;UBERON:0010009!2.72e-07!9;UBERON:0010011!2.72e-07!9;UBERON:0000454!2.72e-07!9;UBERON:0003076!4.12e-07!15;UBERON:0003057!4.12e-07!15;UBERON:0002308!8.43e-07!9;UBERON:0000125!8.43e-07!9|ontology_enrichment_uberon_v019=UBERON:0001893;6.53e-25;34!UBERON:0002780;2.25e-23;41!UBERON:0001890;2.25e-23;41!UBERON:0001869;3.88e-23;32!UBERON:0000073;5.52e-23;53!UBERON:0002616;5.52e-23;53!UBERON:0002619;5.61e-22;22!UBERON:0002791;2.01e-20;32!UBERON:0001950;2.94e-20;20!UBERON:0000956;4.00e-19;25!UBERON:0000203;4.00e-19;25!UBERON:0003528;1.16e-18;34!UBERON:0002020;1.16e-18;34!UBERON:0000955;1.83e-14;68!UBERON:0001017;2.12e-13;75!UBERON:0007023;5.88e-13;114!UBERON:0001016;8.75e-13;83!UBERON:0000200;1.31e-10;6!UBERON:0004732;4.94e-10;13!UBERON:0005162;8.57e-09;2!UBERON:0000122;8.57e-09;2!UBERON:0004733;8.21e-08;12!UBERON:0002028;8.21e-08;12!UBERON:0001872;1.06e-07;5!UBERON:0000349;1.06e-07;5!UBERON:0002420;6.89e-07;9!UBERON:0007245;6.89e-07;9!UBERON:0010009;6.89e-07;9!UBERON:0010011;6.89e-07;9!UBERON:0000454;6.89e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.12e-39,56;UBERON:0005068,1.12e-39,56;UBERON:0006241,1.12e-39,56;UBERON:0007135,1.12e-39,56;UBERON:0007023,9.47e-38,114;UBERON:0000073,1.31e-35,53;UBERON:0002616,1.31e-35,53;UBERON:0001017,2.79e-32,81;UBERON:0000955,3.10e-31,68;UBERON:0006238,3.10e-31,68;UBERON:0001016,1.21e-30,89;UBERON:0003075,1.06e-29,82;UBERON:0007284,1.06e-29,82;UBERON:0002780,8.69e-29,41;UBERON:0001890,8.69e-29,41;UBERON:0003080,8.69e-29,41;UBERON:0006240,8.69e-29,41;UBERON:0001893,2.28e-28,34;UBERON:0002346,5.22e-28,86;UBERON:0001869,1.23e-26,32;UBERON:0010371,1.15e-25,104;UBERON:0002791,3.83e-23,32;UBERON:0002619,4.39e-22,22;UBERON:0003528,1.31e-21,34;UBERON:0002020,1.31e-21,34;UBERON:0001950,2.08e-20,20;UBERON:0010314,3.32e-20,132;UBERON:0003056,4.57e-20,61;UBERON:0004121,4.89e-20,171;UBERON:0000924,4.89e-20,171;UBERON:0006601,4.89e-20,171;UBERON:0000956,3.22e-19,25;UBERON:0000203,3.22e-19,25;UBERON:0003076,8.31e-12,15;UBERON:0003057,8.31e-12,15;UBERON:0000200,1.17e-10,6;UBERON:0004732,2.94e-10,13;UBERON:0000025,9.26e-10,192;UBERON:0011216,1.03e-09,223;UBERON:0005162,8.00e-09,2;UBERON:0000122,8.00e-09,2;UBERON:0004111,1.26e-08,240;UBERON:0004733,5.45e-08,12;UBERON:0002028,5.45e-08,12;UBERON:0007277,5.45e-08,12;UBERON:0001872,9.53e-08,5;UBERON:0000349,9.53e-08,5;UBERON:0002420,5.82e-07,9;UBERON:0007245,5.82e-07,9;UBERON:0010009,5.82e-07,9;UBERON:0010011,5.82e-07,9;UBERON:0000454,5.82e-07,9|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0.893922188854576,0,0,0,1.82829939739887,0,0,0,0,0.37129905888014,0.662794751455832,0,0,0,0,0.61560529038394,0.204000691244253,0.626909442956176,0.286235987131057,0.410623275218653,0.502170558379211,0,0.0821005894499457,0.157421562627358,0,0,0.154816123316076,0,0.30120591877825,0,0.0774672005803016,0,0,0.553995408531877,0.401088894940283,0,0,0,0.257575567634187,0.290796477559129,0.377875943688809,0,0.232429036905685,0.411167888021826,0,0.575384784644301,0,0,0.344745680736619,0,0,0.188242339542605,0.545812300115692,0,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0.285012743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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=51621 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13672 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y2Y9 | |||
|association_with_transcript=-155bp_to_ENST00000307145_5end | |||
|description=CAGE_peak_15_at_KLF13_5end | |||
|id=chr15:31618889..31618902,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;2.40e-08;2!CL:0000558;2.40e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,9.70e-09,2;CL:0000765,9.70e-09,2;CL:0000050,9.70e-09,2;CL:0000038,9.70e-09,2;CL:0000558,9.70e-09,2;CL:0000547,9.70e-09,2;CL:0000549,9.70e-09,2;CL:0000550,9.70e-09,2;CL:0000552,9.70e-09,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.61e-10;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| |||
|short_description=p15@KLF13 | |||
}} |
Revision as of 06:33, 11 September 2013
Short description: | p15@KLF13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_15_at_KLF13_5end |
Coexpression cluster: | NA |
Association with transcript: | -155bp_to_ENST00000307145_5end |
EntrezGene: | KLF13 |
HGNC: | 13672 |
UniProt: | Q9Y2Y9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 9.70e-09 | 2 |
erythroblast | 9.70e-09 | 2 |
megakaryocyte-erythroid progenitor cell | 9.70e-09 | 2 |
erythroid progenitor cell | 9.70e-09 | 2 |
reticulocyte | 9.70e-09 | 2 |
proerythroblast | 9.70e-09 | 2 |
basophilic erythroblast | 9.70e-09 | 2 |
polychromatophilic erythroblast | 9.70e-09 | 2 |
orthochromatic erythroblast | 9.70e-09 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.