FFCP PHASE1:Hg19::chr14:95085534..95085575,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=12|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=16|TSSclassifier=S|UniProt=P01011|association_with_transcript=0bp_to_BC013189_5end|coexpression_cluster_id=C5|description=CAGE_peak_5_at_SERPINA3_5end|id=chr14:95085534..95085575,+|ontology_enrichment_celltype=CL:0000181!5.88e-07!12;CL:0000417!5.88e-07!12;CL:0000668!5.88e-07!12;CL:0000414!5.88e-07!12;CL:0000412!5.88e-07!12;CL:0000182!5.88e-07!12|ontology_enrichment_celltype_v019=CL:0000182;8.55e-26;12!CL:0000746;7.98e-10;3!CL:0000737;1.42e-07;4|ontology_enrichment_celltype_v019_2=CL:0000182,8.57e-26,12;CL:0000746,7.47e-10,3;CL:0000513,7.47e-10,3;CL:0000737,1.35e-07,4|ontology_enrichment_development_v019=UBERON:0004161;1.12e-20;11!UBERON:0009497;2.01e-17;13!UBERON:0003104;2.52e-12;31!CL:0000513;7.98e-10;3!UBERON:0010227;1.31e-07;1!UBERON:0010115;1.31e-07;1!UBERON:0001041;2.98e-07;30|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.51e-44!115;UBERON:0003075!6.92e-24!86;UBERON:0007284!6.92e-24!86;UBERON:0001049!2.63e-22!57;UBERON:0005068!2.63e-22!57;UBERON:0006241!2.63e-22!57;UBERON:0007135!2.63e-22!57;UBERON:0002346!3.10e-22!90;UBERON:0005743!5.06e-21!86;UBERON:0002616!2.77e-19!59;UBERON:0000073!6.97e-18!94;UBERON:0001016!6.97e-18!94;UBERON:0001017!1.31e-17!82;UBERON:0000955!7.54e-16!69;UBERON:0006238!7.54e-16!69;UBERON:0003056!3.10e-14!61;UBERON:0000033!8.44e-13!123;UBERON:0003076!9.23e-13!15;UBERON:0003057!9.23e-13!15;UBERON:0000477!1.11e-12!286;UBERON:0000119!1.20e-12!312;UBERON:0000025!1.46e-12!194;UBERON:0002298!1.47e-12!8;UBERON:0000475!1.52e-12!365;UBERON:0003080!3.22e-12!42;UBERON:0004111!5.47e-12!241;UBERON:0000483!7.54e-12!309;UBERON:0000153!1.16e-11!129;UBERON:0007811!1.16e-11!129;UBERON:0002308!1.38e-11!9;UBERON:0000125!1.38e-11!9;UBERON:0002780!3.46e-11!41;UBERON:0001890!3.46e-11!41;UBERON:0006240!3.46e-11!41;UBERON:0002420!4.33e-11!9;UBERON:0007245!4.33e-11!9;UBERON:0010009!4.33e-11!9;UBERON:0010011!4.33e-11!9;UBERON:0000454!4.33e-11!9;UBERON:0000481!9.82e-11!347;UBERON:0004121!1.56e-10!169;UBERON:0000924!5.40e-10!173;UBERON:0006601!5.40e-10!173;UBERON:0002020!3.33e-09!34;UBERON:0003528!3.33e-09!34;UBERON:0004733!6.74e-09!12;UBERON:0002028!6.74e-09!12;UBERON:0007277!6.74e-09!12;UBERON:0009663!1.08e-08!7;UBERON:0002791!3.88e-08!33;UBERON:0004732!4.57e-08!13;UBERON:0000062!5.80e-08!511;UBERON:0001893!8.66e-08!34;UBERON:0000468!5.11e-07!659|ontology_enrichment_uberon_v019=UBERON:0002107;1.22e-26;19!UBERON:0006925;1.22e-26;19!UBERON:0002423;6.66e-20;25!UBERON:0002365;2.49e-15;31!UBERON:0002330;2.49e-15;31!UBERON:0002081;8.59e-14;2!UBERON:0002368;1.95e-13;33!UBERON:0000949;2.23e-13;43!UBERON:0004151;1.71e-09;3!UBERON:0000029;5.90e-08;1!UBERON:0002134;7.21e-08;1!UBERON:0005208;7.21e-08;1!UBERON:0004145;7.21e-08;1!UBERON:0005946;7.21e-08;1!UBERON:0005965;7.21e-08;1!UBERON:0002078;7.21e-08;1!UBERON:0002363;1.31e-07;1!UBERON:0002079;1.31e-07;1!UBERON:0002038;1.31e-07;1!UBERON:0009661;1.31e-07;1!UBERON:0002950;1.31e-07;1!UBERON:0001891;1.31e-07;1!UBERON:0005172;1.47e-07;52!UBERON:0005173;1.47e-07;52!UBERON:0000125;5.78e-07;9!UBERON:0002308;5.78e-07;9|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.23e-26,19;UBERON:0006925,1.23e-26,19;UBERON:0008836,1.23e-26,19;UBERON:0008835,8.22e-23,22;UBERON:0003894,8.22e-23,22;UBERON:0009854,9.30e-22,23;UBERON:0007499,6.67e-20,25;UBERON:0009497,6.67e-20,25;UBERON:0000015,6.67e-20,25;UBERON:0002423,6.67e-20,25;UBERON:0006235,6.67e-20,25;UBERON:0004161,6.67e-20,25;UBERON:0009856,4.41e-19,26;UBERON:0002365,9.03e-16,31;UBERON:0002330,9.03e-16,31;UBERON:0000949,1.04e-15,45;UBERON:0002368,8.39e-14,35;UBERON:0002081,9.17e-14,2;UBERON:0010227,9.17e-14,2;UBERON:0007023,3.23e-11,114;UBERON:0005172,2.12e-10,54;UBERON:0005173,2.12e-10,54;UBERON:0004151,1.78e-09,3;UBERON:0002417,3.45e-09,60;UBERON:0000916,3.45e-09,60;UBERON:0005177,1.83e-08,101;UBERON:0003929,1.95e-08,54;UBERON:0000025,2.69e-08,192;UBERON:0000029,6.10e-08,1;UBERON:0002134,7.97e-08,1;UBERON:0005208,7.97e-08,1;UBERON:0005946,7.97e-08,1;UBERON:0005965,7.97e-08,1;UBERON:0002078,7.97e-08,1;UBERON:0002038,8.51e-08,1;UBERON:0009661,8.51e-08,1;UBERON:0002950,8.51e-08,1;UBERON:0001891,8.51e-08,1;UBERON:0009616,8.51e-08,1;UBERON:0010286,8.51e-08,1;UBERON:0002363,9.10e-08,1;UBERON:0007645,9.10e-08,1;UBERON:0007647,9.10e-08,1;UBERON:0010115,9.10e-08,1;UBERON:0002079,1.26e-07,1;UBERON:0002530,1.33e-07,59;UBERON:0000125,5.55e-07,9;UBERON:0002308,5.55e-07,9;UBERON:0003914,5.88e-07,117|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,8.04841031644363,0.383587685530591,0,0,0,0,4.37971383272372,0.0945348171640679,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=12 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=16 | |||
|TSSclassifier=S | |||
|UniProt=P01011 | |||
|association_with_transcript=0bp_to_BC013189_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_5_at_SERPINA3_5end | |||
|id=chr14:95085534..95085575,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.88e-07!12;CL:0000417!5.88e-07!12;CL:0000668!5.88e-07!12;CL:0000414!5.88e-07!12;CL:0000412!5.88e-07!12;CL:0000182!5.88e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;8.55e-26;12!CL:0000746;7.98e-10;3!CL:0000737;1.42e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,8.57e-26,12;CL:0000746,7.47e-10,3;CL:0000513,7.47e-10,3;CL:0000737,1.35e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.12e-20;11!UBERON:0009497;2.01e-17;13!UBERON:0003104;2.52e-12;31!CL:0000513;7.98e-10;3!UBERON:0010227;1.31e-07;1!UBERON:0010115;1.31e-07;1!UBERON:0001041;2.98e-07;30 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-44!115;UBERON:0003075!6.92e-24!86;UBERON:0007284!6.92e-24!86;UBERON:0001049!2.63e-22!57;UBERON:0005068!2.63e-22!57;UBERON:0006241!2.63e-22!57;UBERON:0007135!2.63e-22!57;UBERON:0002346!3.10e-22!90;UBERON:0005743!5.06e-21!86;UBERON:0002616!2.77e-19!59;UBERON:0000073!6.97e-18!94;UBERON:0001016!6.97e-18!94;UBERON:0001017!1.31e-17!82;UBERON:0000955!7.54e-16!69;UBERON:0006238!7.54e-16!69;UBERON:0003056!3.10e-14!61;UBERON:0000033!8.44e-13!123;UBERON:0003076!9.23e-13!15;UBERON:0003057!9.23e-13!15;UBERON:0000477!1.11e-12!286;UBERON:0000119!1.20e-12!312;UBERON:0000025!1.46e-12!194;UBERON:0002298!1.47e-12!8;UBERON:0000475!1.52e-12!365;UBERON:0003080!3.22e-12!42;UBERON:0004111!5.47e-12!241;UBERON:0000483!7.54e-12!309;UBERON:0000153!1.16e-11!129;UBERON:0007811!1.16e-11!129;UBERON:0002308!1.38e-11!9;UBERON:0000125!1.38e-11!9;UBERON:0002780!3.46e-11!41;UBERON:0001890!3.46e-11!41;UBERON:0006240!3.46e-11!41;UBERON:0002420!4.33e-11!9;UBERON:0007245!4.33e-11!9;UBERON:0010009!4.33e-11!9;UBERON:0010011!4.33e-11!9;UBERON:0000454!4.33e-11!9;UBERON:0000481!9.82e-11!347;UBERON:0004121!1.56e-10!169;UBERON:0000924!5.40e-10!173;UBERON:0006601!5.40e-10!173;UBERON:0002020!3.33e-09!34;UBERON:0003528!3.33e-09!34;UBERON:0004733!6.74e-09!12;UBERON:0002028!6.74e-09!12;UBERON:0007277!6.74e-09!12;UBERON:0009663!1.08e-08!7;UBERON:0002791!3.88e-08!33;UBERON:0004732!4.57e-08!13;UBERON:0000062!5.80e-08!511;UBERON:0001893!8.66e-08!34;UBERON:0000468!5.11e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.22e-26;19!UBERON:0006925;1.22e-26;19!UBERON:0002423;6.66e-20;25!UBERON:0002365;2.49e-15;31!UBERON:0002330;2.49e-15;31!UBERON:0002081;8.59e-14;2!UBERON:0002368;1.95e-13;33!UBERON:0000949;2.23e-13;43!UBERON:0004151;1.71e-09;3!UBERON:0000029;5.90e-08;1!UBERON:0002134;7.21e-08;1!UBERON:0005208;7.21e-08;1!UBERON:0004145;7.21e-08;1!UBERON:0005946;7.21e-08;1!UBERON:0005965;7.21e-08;1!UBERON:0002078;7.21e-08;1!UBERON:0002363;1.31e-07;1!UBERON:0002079;1.31e-07;1!UBERON:0002038;1.31e-07;1!UBERON:0009661;1.31e-07;1!UBERON:0002950;1.31e-07;1!UBERON:0001891;1.31e-07;1!UBERON:0005172;1.47e-07;52!UBERON:0005173;1.47e-07;52!UBERON:0000125;5.78e-07;9!UBERON:0002308;5.78e-07;9 | |||
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|phase1_expression=0.181678379270557,0.428201047781966,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,8.04841031644363,0.383587685530591,0,0,0,0,4.37971383272372,0.0945348171640679,0.221729397462564,0.263504357079378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0.163461903113459,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213557388818567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,77.3205712413168,96.3170672344073,90.9816456289362,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0,0.462985512576611,0,0,0.858486162094873,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0.637938751653163,0,0,0,0,0.500170521059677,0,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.519254429183621,0,0.241718899183244,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.650756789328606,3.91555844261345,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0.0890320356467374,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,4.0481834334015,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0.185536196323703,0,0.260427761085233,0,2.17499872630438,0,0,0,0,0,0,5.31444831488303,0.723578631752448,0,0.110579259931225,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269604531922708,0,0.234264445725339,0,0,2.18502341580683,0,0,0,1.70603764996917,0,0,0,0.330991955875499,0,0,0,0.416024019039416,0,0,0,0.34945333648406,0,0,0,0,0.387956065953678,0,0.451961481561065,0,0,0.0633107959558787,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0,0,0.279282401272254,0,2.15361907373044,0.998395002494955,0.858452096273142,0.223171457441873,0,0,1.16495949527454,1.3393140992228,1.483485450861,1.48287796479207,0,0,0,0.408610218334727,0,0,0,0,0,0,0,1.41850273138557,0.104909176269996,0,0,0,1.42939065274673,0.662091970365432,0,0,0,0,0,0,0,0,147.138442612795,13.2506888912221,0.646414781807753,1.05786081394152,0,0,0.320362237703084,0,0,3.47316215268366,0,0,0,0,0,0,0,0,0,0.122026264901963,0.876336514945499,0.573409195690071,1.66393577305278,0.18628920882415,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.798169295285756,0,0,0,0.322951291263702,0,0,0,0,0.115525666150338,0,0,0,0.752103283492572,0,12.5042241797295,0,0,0.443568258651136,0,0,1.03343398250592,0,0,0,0,0,0.383287282918786,0.535701835878287,0,0.606965604236632,0.455324382702595,0,0,0,0.0679697329768317,0,0,0,0.39246546425257,0.314231179832004,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,0,0.410651227424988,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,1.57046773691956,0.594092800654172,0.4226557275834,0,0.563903507879121,0,0,0.178553938605658,0,0,0,0,1.86341458096887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13668047327359,0.267964130156178,0,0.310298987585686,0,0,0,0,0,0.190941474834495,0,0,0,0.0673520530145875,4.2316101181679,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p5@SERPINA3 | |||
}} |
Revision as of 06:11, 11 September 2013
Short description: | p5@SERPINA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SERPINA3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_BC013189_5end |
EntrezGene: | SERPINA3 |
HGNC: | 16 |
UniProt: | P01011 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 8.57e-26 | 12 |
cardiac muscle cell | 7.47e-10 | 3 |
cardiac muscle myoblast | 7.47e-10 | 3 |
striated muscle cell | 1.35e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.