FFCP PHASE1:Hg19::chr14:75079066..75079077,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=4053|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=6715|TSSclassifier=S|UniProt=G3V511|association_with_transcript=3bp_to_ENST00000553939_5end|coexpression_cluster_id=C758|description=CAGE_peak_13_at_LTBP2_5end|id=chr14:75079066..75079077,-|ontology_enrichment_celltype=CL:0000055!2.99e-22!180;CL:0000222!4.37e-19!119;CL:0000057!8.38e-18!75;CL:0002371!5.40e-17!591;CL:0000144!2.22e-15!625;CL:0000220!3.86e-15!246;CL:0002321!1.16e-14!248;CL:0002139!1.47e-14!24;CL:0000115!2.02e-14!35;CL:0000071!1.59e-12!18;CL:0002546!1.59e-12!18;CL:0002078!4.32e-12!44;CL:0000183!8.67e-12!59;CL:0000548!6.21e-11!679;CL:0000004!6.21e-11!679;CL:0000255!6.21e-11!679;CL:0000012!1.79e-10!682;CL:0000680!2.03e-10!57;CL:0000056!2.03e-10!57;CL:0000355!2.03e-10!57;CL:0000359!5.22e-10!32;CL:0000213!6.53e-10!57;CL:0000215!6.53e-10!57;CL:0000187!2.60e-09!54;CL:1000413!4.06e-08!9;CL:0000192!4.30e-08!42;CL:0000514!4.30e-08!42;CL:0000393!4.67e-07!60;CL:0000211!4.67e-07!60;CL:0002620!6.29e-07!23;CL:0002334!8.68e-07!12|ontology_enrichment_celltype_v019=CL:0000071;2.37e-17;18!CL:0002139;3.17e-17;24!CL:0000115;9.94e-15;36!CL:1000413;6.50e-12;9!CL:0002078;4.29e-09;45!CL:0002544;9.22e-09;6!CL:0002334;1.31e-07;12!CL:0002543;3.62e-07;6!CL:0000213;8.27e-07;58!CL:0000215;8.27e-07;58|ontology_enrichment_celltype_v019_2=CL:0000071,9.21e-18,18;CL:0002546,9.21e-18,18;CL:0002139,1.23e-17,24;CL:0000115,1.52e-16,36;CL:0002078,6.41e-14,45;CL:0000222,3.13e-13,121;CL:0000057,3.62e-13,76;CL:1000413,3.03e-12,9;CL:0000213,1.05e-09,58;CL:0000215,1.05e-09,58;CL:0002321,1.55e-09,250;CL:0002544,7.18e-09,6;CL:0002334,9.40e-08,12;CL:0002543,2.50e-07,6|ontology_enrichment_development_v019=CL:0002546;2.37e-17;18|ontology_enrichment_disease=DOID:2394!1.11e-08!14|ontology_enrichment_disease_v019=DOID:2394;7.00e-12;14|ontology_enrichment_disease_v019_2=DOID:2394,4.26e-12,14|ontology_enrichment_uberon=UBERON:0002049!1.06e-27!79;UBERON:0007798!1.06e-27!79;UBERON:0000055!9.08e-24!69;UBERON:0004872!1.19e-21!84;UBERON:0001981!2.05e-21!60;UBERON:0007500!2.05e-21!60;UBERON:0004537!2.05e-21!60;UBERON:0006965!2.05e-21!60;UBERON:0004535!8.61e-21!110;UBERON:0001009!1.48e-20!113;UBERON:0003914!4.20e-17!118;UBERON:0001637!1.23e-16!42;UBERON:0003509!1.23e-16!42;UBERON:0004572!1.23e-16!42;UBERON:0001986!1.59e-12!18;UBERON:0004638!1.59e-12!18;UBERON:0004852!1.59e-12!18;UBERON:0000914!3.97e-12!83;UBERON:0002329!3.97e-12!83;UBERON:0003077!3.97e-12!83;UBERON:0003059!3.97e-12!83;UBERON:0007282!3.97e-12!83;UBERON:0009618!3.97e-12!83;UBERON:0007285!3.97e-12!83;UBERON:0000486!6.50e-12!82;UBERON:0004573!7.52e-12!33;UBERON:0004571!7.52e-12!33;UBERON:0000119!3.57e-11!312;UBERON:0000487!5.14e-11!22;UBERON:0000483!1.11e-10!309;UBERON:0006914!1.24e-10!25;UBERON:0000947!2.32e-10!21;UBERON:0010191!2.32e-10!21;UBERON:0000490!6.01e-10!138;UBERON:0004290!2.65e-09!70;UBERON:0001134!3.33e-09!61;UBERON:0002036!3.33e-09!61;UBERON:0003082!3.33e-09!61;UBERON:0000477!3.67e-09!286;UBERON:0002385!1.90e-08!63;UBERON:0001015!1.90e-08!63;UBERON:0000383!1.90e-08!63;UBERON:0005256!3.71e-08!143;UBERON:0003915!4.06e-08!9;UBERON:0004700!4.06e-08!9;UBERON:0001917!4.06e-08!9;UBERON:0000475!4.76e-08!365;UBERON:0000468!5.12e-08!659;UBERON:0000467!5.70e-08!625;UBERON:0000480!7.67e-08!626;UBERON:0004111!9.01e-08!241;UBERON:0003102!1.69e-07!95;UBERON:0002100!8.21e-07!216|ontology_enrichment_uberon_v019=UBERON:0004638;2.37e-17;18!UBERON:0001986;2.37e-17;18!UBERON:0004852;2.37e-17;18!UBERON:0000487;9.51e-15;22!UBERON:0006914;1.05e-13;25!UBERON:0001637;1.82e-12;42!UBERON:0003509;1.82e-12;42!UBERON:0004572;1.82e-12;42!UBERON:0003915;6.50e-12;9!UBERON:0004700;6.50e-12;9!UBERON:0001917;6.50e-12;9!UBERON:0000947;8.45e-12;21!UBERON:0010191;8.45e-12;21!UBERON:0000490;1.13e-10;33!UBERON:0003914;3.31e-10;74!UBERON:0007500;4.62e-10;56!UBERON:0001981;4.62e-10;56!UBERON:0004537;4.62e-10;56!UBERON:0004573;6.92e-10;33!UBERON:0004571;6.92e-10;33!UBERON:0000055;1.68e-09;65!UBERON:0002049;5.44e-09;75!UBERON:0007798;5.44e-09;75!UBERON:0002118;1.85e-07;5!UBERON:0000992;3.97e-07;13|ontology_enrichment_uberon_v019_2=UBERON:0002049,9.92e-20,78;UBERON:0007798,9.92e-20,78;UBERON:0000055,8.90e-18,68;UBERON:0004638,9.21e-18,18;UBERON:0001986,9.21e-18,18;UBERON:0004852,9.21e-18,18;UBERON:0004872,2.38e-17,83;UBERON:0007500,6.20e-17,59;UBERON:0001981,6.20e-17,59;UBERON:0004537,6.20e-17,59;UBERON:0006965,6.20e-17,59;UBERON:0004535,2.80e-16,109;UBERON:0001637,9.66e-16,42;UBERON:0003509,9.66e-16,42;UBERON:0004572,9.66e-16,42;UBERON:0001009,2.04e-15,112;UBERON:0003914,2.76e-15,117;UBERON:0000487,3.52e-15,22;UBERON:0006914,4.85e-14,25;UBERON:0003915,3.03e-12,9;UBERON:0004700,3.03e-12,9;UBERON:0001917,3.03e-12,9;UBERON:0000947,1.08e-11,21;UBERON:0010191,1.08e-11,21;UBERON:0004573,5.86e-10,33;UBERON:0004571,5.86e-10,33;UBERON:0002118,1.82e-07,5;UBERON:0000992,2.71e-07,13|phase1_expression=0.726713517082227,0.856402095563933,1.40954404095971,0,0,0,0,1.26343974685366,0.261185628199839,0.491467873003018,0,2.62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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=4053 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6715 | |||
|TSSclassifier=S | |||
|UniProt=G3V511 | |||
|association_with_transcript=3bp_to_ENST00000553939_5end | |||
|coexpression_cluster_id=C758 | |||
|description=CAGE_peak_13_at_LTBP2_5end | |||
|id=chr14:75079066..75079077,- | |||
|ontology_enrichment_celltype=CL:0000055!2.99e-22!180;CL:0000222!4.37e-19!119;CL:0000057!8.38e-18!75;CL:0002371!5.40e-17!591;CL:0000144!2.22e-15!625;CL:0000220!3.86e-15!246;CL:0002321!1.16e-14!248;CL:0002139!1.47e-14!24;CL:0000115!2.02e-14!35;CL:0000071!1.59e-12!18;CL:0002546!1.59e-12!18;CL:0002078!4.32e-12!44;CL:0000183!8.67e-12!59;CL:0000548!6.21e-11!679;CL:0000004!6.21e-11!679;CL:0000255!6.21e-11!679;CL:0000012!1.79e-10!682;CL:0000680!2.03e-10!57;CL:0000056!2.03e-10!57;CL:0000355!2.03e-10!57;CL:0000359!5.22e-10!32;CL:0000213!6.53e-10!57;CL:0000215!6.53e-10!57;CL:0000187!2.60e-09!54;CL:1000413!4.06e-08!9;CL:0000192!4.30e-08!42;CL:0000514!4.30e-08!42;CL:0000393!4.67e-07!60;CL:0000211!4.67e-07!60;CL:0002620!6.29e-07!23;CL:0002334!8.68e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0000071;2.37e-17;18!CL:0002139;3.17e-17;24!CL:0000115;9.94e-15;36!CL:1000413;6.50e-12;9!CL:0002078;4.29e-09;45!CL:0002544;9.22e-09;6!CL:0002334;1.31e-07;12!CL:0002543;3.62e-07;6!CL:0000213;8.27e-07;58!CL:0000215;8.27e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,9.21e-18,18;CL:0002546,9.21e-18,18;CL:0002139,1.23e-17,24;CL:0000115,1.52e-16,36;CL:0002078,6.41e-14,45;CL:0000222,3.13e-13,121;CL:0000057,3.62e-13,76;CL:1000413,3.03e-12,9;CL:0000213,1.05e-09,58;CL:0000215,1.05e-09,58;CL:0002321,1.55e-09,250;CL:0002544,7.18e-09,6;CL:0002334,9.40e-08,12;CL:0002543,2.50e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.37e-17;18 | |||
|ontology_enrichment_disease=DOID:2394!1.11e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;7.00e-12;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,4.26e-12,14 | |||
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|ontology_enrichment_uberon_v019=UBERON:0004638;2.37e-17;18!UBERON:0001986;2.37e-17;18!UBERON:0004852;2.37e-17;18!UBERON:0000487;9.51e-15;22!UBERON:0006914;1.05e-13;25!UBERON:0001637;1.82e-12;42!UBERON:0003509;1.82e-12;42!UBERON:0004572;1.82e-12;42!UBERON:0003915;6.50e-12;9!UBERON:0004700;6.50e-12;9!UBERON:0001917;6.50e-12;9!UBERON:0000947;8.45e-12;21!UBERON:0010191;8.45e-12;21!UBERON:0000490;1.13e-10;33!UBERON:0003914;3.31e-10;74!UBERON:0007500;4.62e-10;56!UBERON:0001981;4.62e-10;56!UBERON:0004537;4.62e-10;56!UBERON:0004573;6.92e-10;33!UBERON:0004571;6.92e-10;33!UBERON:0000055;1.68e-09;65!UBERON:0002049;5.44e-09;75!UBERON:0007798;5.44e-09;75!UBERON:0002118;1.85e-07;5!UBERON:0000992;3.97e-07;13 | |||
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| |||
|short_description=p13@LTBP2 | |||
}} |
Revision as of 05:31, 11 September 2013
Short description: | p13@LTBP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_LTBP2_5end |
Coexpression cluster: | C758_Chondrocyte_Amniotic_Smooth_Fibroblast_Pericytes_Endothelial_Urothelial |
Association with transcript: | 3bp_to_ENST00000553939_5end |
EntrezGene: | LTBP2 |
HGNC: | 6715 |
UniProt: | G3V511 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 9.21e-18 | 18 |
embryonic blood vessel endothelial progenitor cell | 9.21e-18 | 18 |
endothelial cell of vascular tree | 1.23e-17 | 24 |
endothelial cell | 1.52e-16 | 36 |
meso-epithelial cell | 6.41e-14 | 45 |
mesodermal cell | 3.13e-13 | 121 |
fibroblast | 3.62e-13 | 76 |
endothelial cell of artery | 3.03e-12 | 9 |
lining cell | 1.05e-09 | 58 |
barrier cell | 1.05e-09 | 58 |
embryonic cell | 1.55e-09 | 250 |
aortic endothelial cell | 7.18e-09 | 6 |
preadipocyte | 9.40e-08 | 12 |
vein endothelial cell | 2.50e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
vasculature | 9.92e-20 | 78 |
vascular system | 9.92e-20 | 78 |
vessel | 8.90e-18 | 68 |
blood vessel endothelium | 9.21e-18 | 18 |
endothelium | 9.21e-18 | 18 |
cardiovascular system endothelium | 9.21e-18 | 18 |
splanchnic layer of lateral plate mesoderm | 2.38e-17 | 83 |
epithelial tube open at both ends | 6.20e-17 | 59 |
blood vessel | 6.20e-17 | 59 |
blood vasculature | 6.20e-17 | 59 |
vascular cord | 6.20e-17 | 59 |
cardiovascular system | 2.80e-16 | 109 |
artery | 9.66e-16 | 42 |
arterial blood vessel | 9.66e-16 | 42 |
arterial system | 9.66e-16 | 42 |
circulatory system | 2.04e-15 | 112 |
epithelial tube | 2.76e-15 | 117 |
simple squamous epithelium | 3.52e-15 | 22 |
squamous epithelium | 4.85e-14 | 25 |
endothelial tube | 3.03e-12 | 9 |
arterial system endothelium | 3.03e-12 | 9 |
endothelium of artery | 3.03e-12 | 9 |
aorta | 1.08e-11 | 21 |
aortic system | 1.08e-11 | 21 |
systemic artery | 5.86e-10 | 33 |
systemic arterial system | 5.86e-10 | 33 |
right ovary | 1.82e-07 | 5 |
female gonad | 2.71e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 4.26e-12 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.