FFCP PHASE1:Hg19::chr14:67878948..67878953,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=26499|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19238|TSSclassifier=S|UniProt=Q9NYT0|association_with_transcript=-31bp_to_ENST00000216446_5end|coexpression_cluster_id=C80|description=CAGE_peak_4_at_PLEK2_5end|id=chr14:67878948..67878953,-|ontology_enrichment_celltype=CL:0000066!4.53e-28!254;CL:0002076!5.34e-19!43;CL:0000223!5.90e-13!59;CL:0002251!7.25e-11!21;CL:0000076!1.77e-08!62;CL:0000244!5.78e-08!4;CL:0000731!5.78e-08!4;CL:0002159!2.41e-07!13;CL:0002368!5.45e-07!13|ontology_enrichment_celltype_v019=CL:0001014;7.05e-18;2!CL:0001016;7.05e-18;2!CL:0002536;9.66e-17;2!CL:0000039;7.19e-11;7!CL:0000586;7.19e-11;7!CL:0002336;3.12e-09;1!CL:0002261;3.12e-09;1!CL:0002170;3.12e-09;1!CL:0000244;7.88e-09;4!CL:0000731;7.88e-09;4!CL:0002076;7.19e-08;42!CL:0000453;1.12e-07;5|ontology_enrichment_celltype_v019_2=CL:0001014,7.07e-18,2;CL:0001016,7.07e-18,2;CL:0002536,1.14e-16,2;CL:0000039,8.82e-11,7;CL:0000586,8.82e-11,7;CL:0002336,5.28e-09,1;CL:0002261,5.28e-09,1;CL:0002170,5.28e-09,1;CL:0000244,5.30e-09,4;CL:0000731,5.30e-09,4;CL:0002076,1.98e-08,42;CL:0000453,1.12e-07,5;CL:0000066,6.21e-07,253|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:305!3.05e-13!106;DOID:1749!1.02e-11!14;DOID:0050687!8.11e-08!143|ontology_enrichment_disease_v019=DOID:3347;9.83e-10;1|ontology_enrichment_disease_v019_2=DOID:3347,9.44e-10,1|ontology_enrichment_uberon=UBERON:0004119!4.07e-15!169;UBERON:0000925!4.07e-15!169;UBERON:0006595!4.07e-15!169;UBERON:0001007!2.09e-10!155;UBERON:0001555!2.09e-10!155;UBERON:0007026!2.09e-10!155;UBERON:0005911!2.41e-10!82;UBERON:0000344!6.42e-10!12;UBERON:0000365!1.99e-09!5;UBERON:0004807!4.49e-08!28;UBERON:0003729!9.11e-08!5;UBERON:0005910!9.65e-08!6;UBERON:0004921!2.11e-07!129;UBERON:0004185!2.11e-07!129;UBERON:0005409!4.42e-07!35|ontology_enrichment_uberon_v019=UBERON:0001052;3.39e-09;4!UBERON:0005409;1.18e-08;22!UBERON:0004907;1.60e-07;5!UBERON:0000059;2.77e-07;11!UBERON:0000945;3.13e-07;5!UBERON:0010039;3.13e-07;5!UBERON:0000365;3.13e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.01e-09,4;UBERON:0005409,1.07e-07,25;UBERON:0004907,1.46e-07,5;UBERON:0000365,2.28e-07,5;UBERON:0000059,2.60e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.09340350391728,1.52908960491121,1.31883489114227,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.36373060295417,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.737930631258681,0,0.329250856225877,3.37205259772859,0.301586917234893,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.503946384596579,0.283550194484773,0.53735113621709,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0.316654886678627,0,0.510281115829547,0.215915916102139,0,0,0,0.254876273045038,0,0.447749509444357,0,0.784306353074702,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.384888450902048,1.34060455107157,0,0,1.72202149068492,1.68471475667626,0.443430153536676,0.918893600827838,0,0.764637207142375,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,1.61394733071642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,2.96841450011276,0,0,0.265372693510018,2.4441205797345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0.569219092059585,0,0.173559738335131,0.293977192243133,0.34823682632161,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,1.87317542300338,0,0.171594997861965,0.288109595976299,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550157746388935,0,7.19916452964801,4.6428117273477,0,0,0,0.104909176269996,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=26499 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19238 | |||
|TSSclassifier=S | |||
|UniProt=Q9NYT0 | |||
|association_with_transcript=-31bp_to_ENST00000216446_5end | |||
|coexpression_cluster_id=C80 | |||
|description=CAGE_peak_4_at_PLEK2_5end | |||
|id=chr14:67878948..67878953,- | |||
|ontology_enrichment_celltype=CL:0000066!4.53e-28!254;CL:0002076!5.34e-19!43;CL:0000223!5.90e-13!59;CL:0002251!7.25e-11!21;CL:0000076!1.77e-08!62;CL:0000244!5.78e-08!4;CL:0000731!5.78e-08!4;CL:0002159!2.41e-07!13;CL:0002368!5.45e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0001014;7.05e-18;2!CL:0001016;7.05e-18;2!CL:0002536;9.66e-17;2!CL:0000039;7.19e-11;7!CL:0000586;7.19e-11;7!CL:0002336;3.12e-09;1!CL:0002261;3.12e-09;1!CL:0002170;3.12e-09;1!CL:0000244;7.88e-09;4!CL:0000731;7.88e-09;4!CL:0002076;7.19e-08;42!CL:0000453;1.12e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0001014,7.07e-18,2;CL:0001016,7.07e-18,2;CL:0002536,1.14e-16,2;CL:0000039,8.82e-11,7;CL:0000586,8.82e-11,7;CL:0002336,5.28e-09,1;CL:0002261,5.28e-09,1;CL:0002170,5.28e-09,1;CL:0000244,5.30e-09,4;CL:0000731,5.30e-09,4;CL:0002076,1.98e-08,42;CL:0000453,1.12e-07,5;CL:0000066,6.21e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.05e-13!106;DOID:1749!1.02e-11!14;DOID:0050687!8.11e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:3347;9.83e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,9.44e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004119!4.07e-15!169;UBERON:0000925!4.07e-15!169;UBERON:0006595!4.07e-15!169;UBERON:0001007!2.09e-10!155;UBERON:0001555!2.09e-10!155;UBERON:0007026!2.09e-10!155;UBERON:0005911!2.41e-10!82;UBERON:0000344!6.42e-10!12;UBERON:0000365!1.99e-09!5;UBERON:0004807!4.49e-08!28;UBERON:0003729!9.11e-08!5;UBERON:0005910!9.65e-08!6;UBERON:0004921!2.11e-07!129;UBERON:0004185!2.11e-07!129;UBERON:0005409!4.42e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;3.39e-09;4!UBERON:0005409;1.18e-08;22!UBERON:0004907;1.60e-07;5!UBERON:0000059;2.77e-07;11!UBERON:0000945;3.13e-07;5!UBERON:0010039;3.13e-07;5!UBERON:0000365;3.13e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,3.01e-09,4;UBERON:0005409,1.07e-07,25;UBERON:0004907,1.46e-07,5;UBERON:0000365,2.28e-07,5;UBERON:0000059,2.60e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.09340350391728,1.52908960491121,1.31883489114227,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.966304265816484,1.36373060295417,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0.737930631258681,0,0.329250856225877,3.37205259772859,0.301586917234893,1.11106134190236,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.503946384596579,0.283550194484773,0.53735113621709,0,0.383382679165211,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.2933531432838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,1.45031339509947,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0.316654886678627,0,0.510281115829547,0.215915916102139,0,0,0,0.254876273045038,0,0.447749509444357,0,0.784306353074702,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.192190067365106,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0.384888450902048,1.34060455107157,0,0,1.72202149068492,1.68471475667626,0.443430153536676,0.918893600827838,0,0.764637207142375,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449341755736634,0,0,0,0,0,0,0,0,0,0,0,0.341380344856499,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,1.61394733071642,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0.163232808159148,2.96841450011276,0,0,0.265372693510018,2.4441205797345,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0.313932918407225,0,0.569219092059585,0,0.173559738335131,0.293977192243133,0.34823682632161,0,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,1.87317542300338,0,0.171594997861965,0.288109595976299,0.124252535565433,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550157746388935,0,7.19916452964801,4.6428117273477,0,0,0,0.104909176269996,0.316801009558219,0,0.383830394638891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.406870733204662,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0.192914038270915,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,0.633936370075881,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0.353909170043221,0.183428598521679,0.115525666150338,0,3.4517996303005,0,0,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,2.5224494698241,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0.196300467230486,0.121917924982269,0,0,0,0,0.701818390386317,0.198950775161368,0,0.11294608203896,0,0.452888530700021,0.617393264863557,0.655678681511872,0,0,0,0,0,0,0,0,0.0644578879735772,0,0.71421575442263,1.41157948686277,0,1.46067277649303,0,0,0,0,0,0,0,0,0,0,0,0,0.61193297845189,0,2.02168778976659,1.0028301571695,0.0757786982182394,0,0,0,0,0,0.0645889098360061,0.124149428591716,0,0.318235791390825,0.202117188958219,0,0,0,0,0,0.569822880276821,0,0,0.449126010532934,0,0,0,0,0,0 | |||
|short_description=p4@PLEK2 | |||
}} |
Revision as of 05:14, 11 September 2013
Short description: | p4@PLEK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_PLEK2_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | -31bp_to_ENST00000216446_5end |
EntrezGene: | PLEK2 |
HGNC: | 19238 |
UniProt: | Q9NYT0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 7.07e-18 | 2 |
immature CD1a-positive Langerhans cell | 7.07e-18 | 2 |
amniotic epithelial cell | 1.14e-16 | 2 |
germ line cell | 8.82e-11 | 7 |
germ cell | 8.82e-11 | 7 |
buccal mucosa cell | 5.28e-09 | 1 |
endothelial cell of viscerocranial mucosa | 5.28e-09 | 1 |
keratinized cell of the oral mucosa | 5.28e-09 | 1 |
transitional epithelial cell | 5.30e-09 | 4 |
urothelial cell | 5.30e-09 | 4 |
endo-epithelial cell | 1.98e-08 | 42 |
Langerhans cell | 1.12e-07 | 5 |
epithelial cell | 6.21e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
rectum | 3.01e-09 | 4 |
gastrointestinal system | 1.07e-07 | 25 |
lower digestive tract | 1.46e-07 | 5 |
urothelium | 2.28e-07 | 5 |
large intestine | 2.60e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 9.44e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.