FFCP PHASE1:Hg19::chr14:54235896..54235906,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C46|description=CAGE_peak_at_chr14:54235896..54235906,-|id=chr14:54235896..54235906,-|ontology_enrichment_celltype=CL:0002127!8.86e-17!1;CL:0000914!8.86e-17!1;CL:0000911!8.86e-17!1;CL:0000814!8.86e-17!1;CL:0002042!8.86e-17!1;CL:0002039!8.86e-17!1;CL:0002040!8.86e-17!1;CL:0002041!8.86e-17!1;CL:0000946!2.25e-16!1;CL:0000786!2.25e-16!1;CL:0000980!2.25e-16!1;CL:0000313!2.63e-16!1;CL:0002563!3.07e-16!4;CL:0000893!4.70e-09!2;CL:0002489!4.70e-09!2;CL:0000809!4.70e-09!2;CL:0000808!4.70e-09!2;CL:0000894!4.70e-09!2;CL:0000806!4.70e-09!2;CL:0000807!4.70e-09!2;CL:0000805!4.70e-09!2;CL:0002425!4.70e-09!2;CL:0002253!5.49e-09!2;CL:0000785!7.49e-09!2;CL:0000955!7.49e-09!2;CL:0000818!7.49e-09!2;CL:0000954!7.49e-09!2;CL:0000816!7.49e-09!2;CL:0000159!8.09e-09!2;CL:0002251!3.42e-07!21|ontology_enrichment_celltype_v019=CL:0002178;3.27e-23;3|ontology_enrichment_celltype_v019_2=CL:0002178,3.27e-23,3|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0050619!1.93e-16!1;DOID:1357!1.93e-16!1;DOID:2152!2.63e-16!1;DOID:3119!1.37e-10!14;DOID:0050686!3.46e-08!137;DOID:162!8.77e-07!235|ontology_enrichment_disease_v019=DOID:3119;7.13e-20;14|ontology_enrichment_disease_v019_2=DOID:3119,7.13e-20,14|ontology_enrichment_uberon=UBERON:0001764!1.93e-16!1;UBERON:0001825!1.93e-16!1;UBERON:0001052!2.09e-16!4;UBERON:0004911!2.63e-16!1;UBERON:0001242!3.07e-16!4;UBERON:0001262!3.07e-16!4;UBERON:0004786!3.07e-16!4;UBERON:0004808!3.07e-16!4;UBERON:0001277!3.07e-16!4;UBERON:0004907!2.52e-13!5;UBERON:0003350!3.43e-13!5;UBERON:0004909!8.09e-09!2;UBERON:0000485!9.85e-08!9;UBERON:0005409!3.82e-07!35;UBERON:0003929!4.31e-07!54;UBERON:0004921!6.48e-07!129;UBERON:0004185!6.48e-07!129|ontology_enrichment_uberon_v019=UBERON:0001052;1.03e-17;4!UBERON:0000945;1.60e-14;5!UBERON:0010039;1.60e-14;5!UBERON:0004907;1.83e-14;5!UBERON:0005409;1.41e-12;22!UBERON:0000059;2.63e-07;11!UBERON:0004921;3.23e-07;33|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.03e-17,4;UBERON:0004907,1.83e-14,5;UBERON:0005409,2.91e-11,25;UBERON:0000945,1.35e-09,8;UBERON:0010039,1.35e-09,8;UBERON:0000059,2.63e-07,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5450495880541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16998917739033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr14:54235896..54235906,-}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C46 | |||
|description=CAGE_peak_at_chr14:54235896..54235906,- | |||
|id=chr14:54235896..54235906,- | |||
|ontology_enrichment_celltype=CL:0002127!8.86e-17!1;CL:0000914!8.86e-17!1;CL:0000911!8.86e-17!1;CL:0000814!8.86e-17!1;CL:0002042!8.86e-17!1;CL:0002039!8.86e-17!1;CL:0002040!8.86e-17!1;CL:0002041!8.86e-17!1;CL:0000946!2.25e-16!1;CL:0000786!2.25e-16!1;CL:0000980!2.25e-16!1;CL:0000313!2.63e-16!1;CL:0002563!3.07e-16!4;CL:0000893!4.70e-09!2;CL:0002489!4.70e-09!2;CL:0000809!4.70e-09!2;CL:0000808!4.70e-09!2;CL:0000894!4.70e-09!2;CL:0000806!4.70e-09!2;CL:0000807!4.70e-09!2;CL:0000805!4.70e-09!2;CL:0002425!4.70e-09!2;CL:0002253!5.49e-09!2;CL:0000785!7.49e-09!2;CL:0000955!7.49e-09!2;CL:0000818!7.49e-09!2;CL:0000954!7.49e-09!2;CL:0000816!7.49e-09!2;CL:0000159!8.09e-09!2;CL:0002251!3.42e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002178;3.27e-23;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,3.27e-23,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!1.93e-16!1;DOID:1357!1.93e-16!1;DOID:2152!2.63e-16!1;DOID:3119!1.37e-10!14;DOID:0050686!3.46e-08!137;DOID:162!8.77e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:3119;7.13e-20;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.13e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0001764!1.93e-16!1;UBERON:0001825!1.93e-16!1;UBERON:0001052!2.09e-16!4;UBERON:0004911!2.63e-16!1;UBERON:0001242!3.07e-16!4;UBERON:0001262!3.07e-16!4;UBERON:0004786!3.07e-16!4;UBERON:0004808!3.07e-16!4;UBERON:0001277!3.07e-16!4;UBERON:0004907!2.52e-13!5;UBERON:0003350!3.43e-13!5;UBERON:0004909!8.09e-09!2;UBERON:0000485!9.85e-08!9;UBERON:0005409!3.82e-07!35;UBERON:0003929!4.31e-07!54;UBERON:0004921!6.48e-07!129;UBERON:0004185!6.48e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;1.03e-17;4!UBERON:0000945;1.60e-14;5!UBERON:0010039;1.60e-14;5!UBERON:0004907;1.83e-14;5!UBERON:0005409;1.41e-12;22!UBERON:0000059;2.63e-07;11!UBERON:0004921;3.23e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,1.03e-17,4;UBERON:0004907,1.83e-14,5;UBERON:0005409,2.91e-11,25;UBERON:0000945,1.35e-09,8;UBERON:0010039,1.35e-09,8;UBERON:0000059,2.63e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.5450495880541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.16998917739033,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,1.12108865325516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr14:54235896..54235906,- | |||
}} |
Revision as of 04:47, 11 September 2013
Short description: | p@chr14:54235896..54235906, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr14:54235896..54235906, - |
Coexpression cluster: | C46_acute_Hodgkin_thymus_CD8_chronic_CD4_merkel |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 3.27e-23 | 3 |
Ontology term | p-value | n |
---|---|---|
rectum | 1.03e-17 | 4 |
lower digestive tract | 1.83e-14 | 5 |
gastrointestinal system | 2.91e-11 | 25 |
stomach | 1.35e-09 | 8 |
food storage organ | 1.35e-09 | 8 |
large intestine | 2.63e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.13e-20 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.