FFCP PHASE1:Hg19::chr13:111092134..111092140,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr13:111092134..111092140,+|id=chr13:111092134..111092140,+|ontology_enrichment_celltype=CL:0000222!1.74e-17!119;CL:0000055!2.75e-14!180;CL:0000183!7.92e-12!59;CL:0000680!5.23e-10!57;CL:0000056!5.23e-10!57;CL:0000355!5.23e-10!57;CL:0000187!2.66e-09!54;CL:0000220!5.59e-09!246;CL:0002321!7.11e-09!248;CL:0000057!9.66e-09!75;CL:0000393!1.36e-08!60;CL:0000211!1.36e-08!60;CL:0000192!1.68e-08!42;CL:0000514!1.68e-08!42;CL:0000213!2.18e-07!57;CL:0000215!2.18e-07!57|ontology_enrichment_celltype_v019=CL:0002548;5.63e-08;6!CL:1000449;5.54e-07;15!CL:0002541;9.10e-07;3!CL:1000746;9.99e-07;7!CL:1000612;9.99e-07;7|ontology_enrichment_celltype_v019_2=CL:0002548,2.38e-08,6;CL:1000449,6.26e-07,15;CL:0002541,6.86e-07,3;CL:0000222,7.05e-07,121;CL:1000746,9.26e-07,7;CL:1000612,9.26e-07,7|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:2394!7.45e-07!14|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002049!7.35e-15!79;UBERON:0007798!7.35e-15!79;UBERON:0003914!2.15e-14!118;UBERON:0004535!7.88e-14!110;UBERON:0001009!8.65e-14!113;UBERON:0004872!1.06e-12!84;UBERON:0005256!4.72e-11!143;UBERON:0000055!7.08e-11!69;UBERON:0000477!8.80e-11!286;UBERON:0002385!1.99e-10!63;UBERON:0001015!1.99e-10!63;UBERON:0000383!1.99e-10!63;UBERON:0001134!4.92e-10!61;UBERON:0002036!4.92e-10!61;UBERON:0003082!4.92e-10!61;UBERON:0000490!9.22e-10!138;UBERON:0001981!2.41e-09!60;UBERON:0007500!2.41e-09!60;UBERON:0004537!2.41e-09!60;UBERON:0006965!2.41e-09!60;UBERON:0000914!3.76e-08!83;UBERON:0002329!3.76e-08!83;UBERON:0003077!3.76e-08!83;UBERON:0003059!3.76e-08!83;UBERON:0007282!3.76e-08!83;UBERON:0009618!3.76e-08!83;UBERON:0007285!3.76e-08!83;UBERON:0004290!6.83e-08!70;UBERON:0000119!1.02e-07!312;UBERON:0004111!1.07e-07!241;UBERON:0000486!1.60e-07!82;UBERON:0002100!2.34e-07!216;UBERON:0000475!2.36e-07!365;UBERON:0000483!3.41e-07!309;UBERON:0000481!4.23e-07!347;UBERON:0001637!5.34e-07!42;UBERON:0003509!5.34e-07!42;UBERON:0004572!5.34e-07!42;UBERON:0000468!6.32e-07!659|ontology_enrichment_uberon_v019=UBERON:0006555;5.54e-07;15!UBERON:0004819;5.54e-07;15!UBERON:0001285;5.54e-07;15!UBERON:0007684;5.54e-07;15!UBERON:0003124;9.10e-07;3!UBERON:0000920;9.10e-07;3!UBERON:0000074;9.99e-07;7!UBERON:0001229;9.99e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0003914,7.58e-09,117;UBERON:0004535,5.13e-08,109;UBERON:0002049,5.39e-08,78;UBERON:0007798,5.39e-08,78;UBERON:0001009,1.32e-07,112;UBERON:0004211,6.26e-07,15;UBERON:0009773,6.26e-07,15;UBERON:0001231,6.26e-07,15;UBERON:0001285,6.26e-07,15;UBERON:0007684,6.26e-07,15;UBERON:0004208,6.26e-07,15;UBERON:0000920,6.86e-07,3;UBERON:0010532,9.26e-07,7;UBERON:0000074,9.26e-07,7;UBERON:0001229,9.26e-07,7;UBERON:0001230,9.26e-07,7;UBERON:0003220,9.26e-07,7;UBERON:0005749,9.26e-07,7;UBERON:0004199,9.26e-07,7;UBERON:0004209,9.26e-07,7;UBERON:0004198,9.26e-07,7|phase1_expression=0.54503513781167,4.49611100171065,0.563817616383885,3.00219895059391,2.68176656656373,1.74467704820074,5.06599756336621,0,2.35067065379855,0.982935746006035,0.697801167972428,0.218441372130172,0.791300934685361,0.247532705920093,0.331397375727916,2.01697543935533,2.41077811209591,0.730310090387373,0.487932798790507,0,1.22400414746552,0.313454721478088,0.286235987131057,0.547497700291537,1.75759695432724,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,0.255725123687061,0,1.00267582127178,0.579386075843295,0,0,0.0945348171640679,1.77383517970051,0.87834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,2.20094433552054,0.626984899610432,1.03366703667732,0,2.00832367658802,0.805658634218294,0.760272105718513,10.2506064170231,0,11.3419872703446,0.357198913136319,0.22452937262617,0,0,0,0.183201743930407,0,0,0,3.47880366186723,1.51956613997496,0.264818361626438,2.0078563452417,0,1.68203280042692,2.1349799145941,5.67335361359468,0.622422070799533,1.88594940897563,1.63461903113459,1.66493170409425,0.576175924479999,0,0.312160076830321,0.570471821544449,0,0,0,0,0,0.368502951935304,0.413303124703062,1.18800285728205,2.47266929278557,0,3.59309070908119,0,0.500474079487857,0,0.438977620880838,1.22595118319608,0.901428353439581,0.794025282120147,1.4351170855109,0.85422955527427,0.211931901159562,1.50045548042201,0.206105058476878,1.03056216018252,0.18611685633159,0.675105328965065,1.16924406193438,1.00973509697646,0.0920498986422993,0.646584227275248,2.13005755509969,0.503760491138201,0.847802961552438,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0,0.504641701751257,0.36497735907583,0,0,0,0,0,0.118306800039844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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr13:111092134..111092140,+ | |||
|id=chr13:111092134..111092140,+ | |||
|ontology_enrichment_celltype=CL:0000222!1.74e-17!119;CL:0000055!2.75e-14!180;CL:0000183!7.92e-12!59;CL:0000680!5.23e-10!57;CL:0000056!5.23e-10!57;CL:0000355!5.23e-10!57;CL:0000187!2.66e-09!54;CL:0000220!5.59e-09!246;CL:0002321!7.11e-09!248;CL:0000057!9.66e-09!75;CL:0000393!1.36e-08!60;CL:0000211!1.36e-08!60;CL:0000192!1.68e-08!42;CL:0000514!1.68e-08!42;CL:0000213!2.18e-07!57;CL:0000215!2.18e-07!57 | |||
|ontology_enrichment_celltype_v019=CL:0002548;5.63e-08;6!CL:1000449;5.54e-07;15!CL:0002541;9.10e-07;3!CL:1000746;9.99e-07;7!CL:1000612;9.99e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002548,2.38e-08,6;CL:1000449,6.26e-07,15;CL:0002541,6.86e-07,3;CL:0000222,7.05e-07,121;CL:1000746,9.26e-07,7;CL:1000612,9.26e-07,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!7.45e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!7.35e-15!79;UBERON:0007798!7.35e-15!79;UBERON:0003914!2.15e-14!118;UBERON:0004535!7.88e-14!110;UBERON:0001009!8.65e-14!113;UBERON:0004872!1.06e-12!84;UBERON:0005256!4.72e-11!143;UBERON:0000055!7.08e-11!69;UBERON:0000477!8.80e-11!286;UBERON:0002385!1.99e-10!63;UBERON:0001015!1.99e-10!63;UBERON:0000383!1.99e-10!63;UBERON:0001134!4.92e-10!61;UBERON:0002036!4.92e-10!61;UBERON:0003082!4.92e-10!61;UBERON:0000490!9.22e-10!138;UBERON:0001981!2.41e-09!60;UBERON:0007500!2.41e-09!60;UBERON:0004537!2.41e-09!60;UBERON:0006965!2.41e-09!60;UBERON:0000914!3.76e-08!83;UBERON:0002329!3.76e-08!83;UBERON:0003077!3.76e-08!83;UBERON:0003059!3.76e-08!83;UBERON:0007282!3.76e-08!83;UBERON:0009618!3.76e-08!83;UBERON:0007285!3.76e-08!83;UBERON:0004290!6.83e-08!70;UBERON:0000119!1.02e-07!312;UBERON:0004111!1.07e-07!241;UBERON:0000486!1.60e-07!82;UBERON:0002100!2.34e-07!216;UBERON:0000475!2.36e-07!365;UBERON:0000483!3.41e-07!309;UBERON:0000481!4.23e-07!347;UBERON:0001637!5.34e-07!42;UBERON:0003509!5.34e-07!42;UBERON:0004572!5.34e-07!42;UBERON:0000468!6.32e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;5.54e-07;15!UBERON:0004819;5.54e-07;15!UBERON:0001285;5.54e-07;15!UBERON:0007684;5.54e-07;15!UBERON:0003124;9.10e-07;3!UBERON:0000920;9.10e-07;3!UBERON:0000074;9.99e-07;7!UBERON:0001229;9.99e-07;7 | |||
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| |||
|short_description=p@chr13:111092134..111092140,+ | |||
}} |
Revision as of 01:28, 11 September 2013
Short description: | p@chr13:111092134..111092140, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr13:111092134..111092140, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac fibroblast | 2.38e-08 | 6 |
epithelial cell of nephron | 6.26e-07 | 15 |
chorionic membrane mesenchymal stem cell | 6.86e-07 | 3 |
mesodermal cell | 7.05e-07 | 121 |
glomerular cell | 9.26e-07 | 7 |
kidney corpuscule cell | 9.26e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelial tube | 7.58e-09 | 117 |
cardiovascular system | 5.13e-08 | 109 |
vasculature | 5.39e-08 | 78 |
vascular system | 5.39e-08 | 78 |
circulatory system | 1.32e-07 | 112 |
nephron epithelium | 6.26e-07 | 15 |
renal tubule | 6.26e-07 | 15 |
nephron tubule | 6.26e-07 | 15 |
nephron | 6.26e-07 | 15 |
uriniferous tubule | 6.26e-07 | 15 |
nephrogenic mesenchyme | 6.26e-07 | 15 |
egg chorion | 6.86e-07 | 3 |
primitive nephron | 9.26e-07 | 7 |
renal glomerulus | 9.26e-07 | 7 |
renal corpuscle | 9.26e-07 | 7 |
glomerular capsule | 9.26e-07 | 7 |
metanephric mesenchyme | 9.26e-07 | 7 |
glomerular tuft | 9.26e-07 | 7 |
S-shaped body | 9.26e-07 | 7 |
renal vesicle | 9.26e-07 | 7 |
comma-shaped body | 9.26e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.