FFCP PHASE1:Hg19::chr13:47012377..47012399,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=80183|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20420,16319|TSSclassifier=S|UniProt=B7ZBN5|association_with_transcript=-52bp_to_ENST00000409879,ENST00000535073,uc001vbi.3_5end|description=CAGE_peak_1_at_PPP1R2P4_5end,CAGE_peak_9_at_KIAA0226L_5end|id=chr13:47012377..47012399,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000632;3.06e-07;3|ontology_enrichment_celltype_v019_2=CL:0000632,3.16e-07,3|ontology_enrichment_development_v019=UBERON:0009117;3.76e-08;10!UBERON:0005564;3.76e-08;10|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:0060058;2.53e-08;10|ontology_enrichment_disease_v019_2=DOID:2531,4.92e-09,51;DOID:0060083,4.92e-09,51;DOID:0060058,2.53e-08,10|ontology_enrichment_uberon=UBERON:0007023!1.80e-09!115;UBERON:0002616!1.34e-08!59;UBERON:0001893!1.89e-08!34;UBERON:0001049!5.33e-08!57;UBERON:0005068!5.33e-08!57;UBERON:0006241!5.33e-08!57;UBERON:0007135!5.33e-08!57;UBERON:0001869!5.99e-08!32;UBERON:0002791!1.28e-07!33;UBERON:0002020!1.72e-07!34;UBERON:0003528!1.72e-07!34|ontology_enrichment_uberon_v019=UBERON:0001282;2.47e-19;1!UBERON:0009842;2.47e-19;1!UBERON:0003704;2.47e-19;1!UBERON:0001171;2.47e-19;1!UBERON:0001172;2.47e-19;1!UBERON:0000473;5.79e-10;8!UBERON:0003135;1.72e-07;11!UBERON:0001280;2.55e-07;3!UBERON:0004647;2.55e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.71e-19,1;UBERON:0009842,2.71e-19,1;UBERON:0003704,2.71e-19,1;UBERON:0001171,2.71e-19,1;UBERON:0001172,2.71e-19,1;UBERON:0000473,5.29e-10,8;UBERON:0003135,1.62e-07,11;UBERON:0001280,2.63e-07,3;UBERON:0004647,2.63e-07,3;UBERON:0005171,2.63e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,6.50724484874534,0,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0,0.929716147622738,0,0,0,0,0.236482229888585,1.72372840368309,0,0,0,0,0,0.918251677112708,0,0,0,0,0,0.870627715885752,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0.982827216677626,0,10.5951143859516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973865820823666,0,0,0,0,0,0,0,0,0,5.8375745218607,4.47352215784832,3.50383197595008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19037756371603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0.50313580350515,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.131545547125698,0,0,0.313972371402056,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.924351257262837,0.865253124247578,0,0,0,0,0,0,0,1.81868875723775,4.82335434281121,0,0,0,0.23806443146374,0.0645889098360061,0,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p1@PPP1R2P4,p9@KIAA0226L}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=80183 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20420,16319 | |||
|TSSclassifier=S | |||
|UniProt=B7ZBN5 | |||
|association_with_transcript=-52bp_to_ENST00000409879,ENST00000535073,uc001vbi.3_5end | |||
|description=CAGE_peak_1_at_PPP1R2P4_5end,CAGE_peak_9_at_KIAA0226L_5end | |||
|id=chr13:47012377..47012399,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000632;3.06e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000632,3.16e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.76e-08;10!UBERON:0005564;3.76e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:0060058;2.53e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,4.92e-09,51;DOID:0060083,4.92e-09,51;DOID:0060058,2.53e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.80e-09!115;UBERON:0002616!1.34e-08!59;UBERON:0001893!1.89e-08!34;UBERON:0001049!5.33e-08!57;UBERON:0005068!5.33e-08!57;UBERON:0006241!5.33e-08!57;UBERON:0007135!5.33e-08!57;UBERON:0001869!5.99e-08!32;UBERON:0002791!1.28e-07!33;UBERON:0002020!1.72e-07!34;UBERON:0003528!1.72e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0001282;2.47e-19;1!UBERON:0009842;2.47e-19;1!UBERON:0003704;2.47e-19;1!UBERON:0001171;2.47e-19;1!UBERON:0001172;2.47e-19;1!UBERON:0000473;5.79e-10;8!UBERON:0003135;1.72e-07;11!UBERON:0001280;2.55e-07;3!UBERON:0004647;2.55e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001282,2.71e-19,1;UBERON:0009842,2.71e-19,1;UBERON:0003704,2.71e-19,1;UBERON:0001171,2.71e-19,1;UBERON:0001172,2.71e-19,1;UBERON:0000473,5.29e-10,8;UBERON:0003135,1.62e-07,11;UBERON:0001280,2.63e-07,3;UBERON:0004647,2.63e-07,3;UBERON:0005171,2.63e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0,0,6.50724484874534,0,0,0,0,0,0,0,0.257575567634187,0.145398238779565,0.377875943688809,0,0.929716147622738,0,0,0,0,0.236482229888585,1.72372840368309,0,0,0,0,0,0.918251677112708,0,0,0,0,0,0.870627715885752,0.56738522469114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0.0945348171640679,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0.982827216677626,0,10.5951143859516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154048617114644,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973865820823666,0,0,0,0,0,0,0,0,0,5.8375745218607,4.47352215784832,3.50383197595008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.19037756371603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.505492637027904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0.387848869084652,0,0,0,0,0.157204305099666,0.414239055347196,0.496166021811951,0,0,0,0.544017803369474,0.2506898940227,0,0,0,0,0,0,0,0.110929051536852,0.372578417648301,0,0,0,0,0,0,0,0,0,0.554805861502613,0,0.50313580350515,0,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0.781078098613847,0,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.339848664884159,0.131545547125698,0,0,0.313972371402056,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0.111855431797792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,0,0.924351257262837,0.865253124247578,0,0,0,0,0,0,0,1.81868875723775,4.82335434281121,0,0,0,0.23806443146374,0.0645889098360061,0,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p1@PPP1R2P4,p9@KIAA0226L | |||
}} |
Revision as of 02:25, 11 September 2013
Short description: | p1@PPP1R2P4, p9@KIAA0226L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PPP1R2P4_5end, CAGE_peak_9_at_KIAA0226L_5end |
Coexpression cluster: | NA |
Association with transcript: | -52bp_to_ENST00000409879, ENST00000535073, uc001vbi.3_5end |
EntrezGene: | KIAA0226L |
HGNC: | 16319&submit=Submit 20420, 16319 |
UniProt: | B7ZBN5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatic stellate cell | 3.16e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intralobular bile duct | 2.71e-19 | 1 |
acinus | 2.71e-19 | 1 |
intrahepatic bile duct | 2.71e-19 | 1 |
portal lobule | 2.71e-19 | 1 |
hepatic acinus | 2.71e-19 | 1 |
testis | 5.29e-10 | 8 |
male reproductive organ | 1.62e-07 | 11 |
liver parenchyma | 2.63e-07 | 3 |
liver lobule | 2.63e-07 | 3 |
hepatic duct | 2.63e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 4.92e-09 | 51 |
immune system cancer | 4.92e-09 | 51 |
lymphoma | 2.53e-08 | 10 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.