FFCP PHASE1:Hg19::chr12:105863737..105863745,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C328|description=CAGE_peak_at_chr12:105863737..105863745,+|id=chr12:105863737..105863745,+|ontology_enrichment_celltype=CL:0002139!2.88e-72!24;CL:0000115!3.65e-59!35;CL:0002078!4.64e-46!44;CL:0000071!5.14e-45!18;CL:0002546!5.14e-45!18;CL:1000413!1.56e-34!9;CL:0000213!1.95e-34!57;CL:0000215!1.95e-34!57;CL:0005020!2.76e-30!6;CL:0002138!2.76e-30!6;CL:0005022!2.76e-30!6;CL:0002543!1.20e-21!6;CL:0002544!6.91e-21!6;CL:0000222!3.48e-17!119;CL:0002618!1.38e-16!3;CL:0002545!2.73e-11!2;CL:0000076!4.43e-11!62|ontology_enrichment_celltype_v019=CL:0002618;4.54e-74;3!CL:0002139;2.79e-50;24!CL:0002138;6.30e-38;6!CL:0002543;1.52e-37;6!CL:0000115;7.10e-27;36!CL:0000071;2.47e-22;18!CL:0002078;1.10e-16;45!CL:0000213;2.51e-15;58!CL:0000215;2.51e-15;58!CL:0002615;1.60e-09;3|ontology_enrichment_celltype_v019_2=CL:0002618,3.54e-74,3;CL:0002139,2.50e-50,24;CL:0005020,6.30e-38,6;CL:0002138,6.30e-38,6;CL:0005022,6.30e-38,6;CL:0002543,1.34e-37,6;CL:0000115,1.18e-33,36;CL:0002078,5.70e-27,45;CL:0000071,2.27e-22,18;CL:0002546,2.27e-22,18;CL:0000213,5.77e-21,58;CL:0000215,5.77e-21,58;CL:0000222,4.51e-10,121;CL:0002615,1.81e-09,3|ontology_enrichment_development_v019=CL:0005022;6.30e-38;6!CL:0002546;2.47e-22;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001986!5.14e-45!18;UBERON:0004638!5.14e-45!18;UBERON:0004852!5.14e-45!18;UBERON:0000487!2.57e-36!22;UBERON:0003915!1.56e-34!9;UBERON:0004700!1.56e-34!9;UBERON:0001917!1.56e-34!9;UBERON:0006914!1.28e-31!25;UBERON:0000055!1.29e-30!69;UBERON:0002049!4.32e-26!79;UBERON:0007798!4.32e-26!79;UBERON:0001473!1.41e-22!8;UBERON:0004536!1.41e-22!8;UBERON:0006558!1.41e-22!8;UBERON:0004535!4.47e-19!110;UBERON:0001009!1.98e-18!113;UBERON:0001981!4.83e-18!60;UBERON:0007500!4.83e-18!60;UBERON:0004537!4.83e-18!60;UBERON:0006965!4.83e-18!60;UBERON:0002465!6.04e-18!10;UBERON:0004872!2.83e-15!84;UBERON:0001638!2.39e-14!9;UBERON:0003920!2.39e-14!9;UBERON:0004582!2.39e-14!9;UBERON:0005800!2.73e-11!2;UBERON:0001515!2.73e-11!2;UBERON:0003914!4.69e-11!118;UBERON:0002066!3.90e-10!5;UBERON:0001637!4.35e-10!42;UBERON:0003509!4.35e-10!42;UBERON:0004572!4.35e-10!42;UBERON:0004111!4.09e-09!241;UBERON:0000947!4.44e-08!21;UBERON:0010191!4.44e-08!21;UBERON:0000477!8.83e-07!286;UBERON:0000490!9.78e-07!138|ontology_enrichment_uberon_v019=UBERON:0002066;7.36e-45;5!UBERON:0001473;1.12e-28;8!UBERON:0004536;1.12e-28;8!UBERON:0006558;1.12e-28;8!UBERON:0001638;2.47e-25;9!UBERON:0010260;2.47e-25;9!UBERON:0003920;2.47e-25;9!UBERON:0004582;2.47e-25;9!UBERON:0002465;4.09e-23;10!UBERON:0004638;2.47e-22;18!UBERON:0001986;2.47e-22;18!UBERON:0004852;2.47e-22;18!UBERON:0000487;2.23e-18;22!UBERON:0006914;3.09e-16;25!UBERON:0002049;6.12e-11;75!UBERON:0007798;6.12e-11;75!UBERON:0000490;2.66e-10;33!UBERON:0002405;5.14e-09;27!UBERON:0000055;1.22e-08;65|ontology_enrichment_uberon_v019_2=UBERON:0002066,6.33e-45,5;UBERON:0001473,1.12e-28,8;UBERON:0004536,1.12e-28,8;UBERON:0006558,1.12e-28,8;UBERON:0001638,2.27e-25,9;UBERON:0010260,2.27e-25,9;UBERON:0003920,2.27e-25,9;UBERON:0004582,2.27e-25,9;UBERON:0002465,4.10e-23,10;UBERON:0004638,2.27e-22,18;UBERON:0001986,2.27e-22,18;UBERON:0004852,2.27e-22,18;UBERON:0000487,2.09e-18,22;UBERON:0000055,6.69e-18,68;UBERON:0006914,2.91e-16,25;UBERON:0002049,1.29e-15,78;UBERON:0007798,1.29e-15,78;UBERON:0004535,3.49e-11,109;UBERON:0001009,6.96e-11,112;UBERON:0007500,3.93e-07,59;UBERON:0001981,3.93e-07,59;UBERON:0004537,3.93e-07,59;UBERON:0006965,3.93e-07,59|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,1.25849830862972,0.275118041940067,0.417989933073621,3.6178346283706,5.33649394030065,3.3472061276467,0,0,0,0.735326160691737,0.81014194788176,4.19708722935175,1.34717623575702,1.0135033243499,0,0.949265659568129,0.549605231791222,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680374821106063,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_at_chr12:105863737..105863745,+ | |||
|id=chr12:105863737..105863745,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.88e-72!24;CL:0000115!3.65e-59!35;CL:0002078!4.64e-46!44;CL:0000071!5.14e-45!18;CL:0002546!5.14e-45!18;CL:1000413!1.56e-34!9;CL:0000213!1.95e-34!57;CL:0000215!1.95e-34!57;CL:0005020!2.76e-30!6;CL:0002138!2.76e-30!6;CL:0005022!2.76e-30!6;CL:0002543!1.20e-21!6;CL:0002544!6.91e-21!6;CL:0000222!3.48e-17!119;CL:0002618!1.38e-16!3;CL:0002545!2.73e-11!2;CL:0000076!4.43e-11!62 | |||
|ontology_enrichment_celltype_v019=CL:0002618;4.54e-74;3!CL:0002139;2.79e-50;24!CL:0002138;6.30e-38;6!CL:0002543;1.52e-37;6!CL:0000115;7.10e-27;36!CL:0000071;2.47e-22;18!CL:0002078;1.10e-16;45!CL:0000213;2.51e-15;58!CL:0000215;2.51e-15;58!CL:0002615;1.60e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,3.54e-74,3;CL:0002139,2.50e-50,24;CL:0005020,6.30e-38,6;CL:0002138,6.30e-38,6;CL:0005022,6.30e-38,6;CL:0002543,1.34e-37,6;CL:0000115,1.18e-33,36;CL:0002078,5.70e-27,45;CL:0000071,2.27e-22,18;CL:0002546,2.27e-22,18;CL:0000213,5.77e-21,58;CL:0000215,5.77e-21,58;CL:0000222,4.51e-10,121;CL:0002615,1.81e-09,3 | |||
|ontology_enrichment_development_v019=CL:0005022;6.30e-38;6!CL:0002546;2.47e-22;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001986!5.14e-45!18;UBERON:0004638!5.14e-45!18;UBERON:0004852!5.14e-45!18;UBERON:0000487!2.57e-36!22;UBERON:0003915!1.56e-34!9;UBERON:0004700!1.56e-34!9;UBERON:0001917!1.56e-34!9;UBERON:0006914!1.28e-31!25;UBERON:0000055!1.29e-30!69;UBERON:0002049!4.32e-26!79;UBERON:0007798!4.32e-26!79;UBERON:0001473!1.41e-22!8;UBERON:0004536!1.41e-22!8;UBERON:0006558!1.41e-22!8;UBERON:0004535!4.47e-19!110;UBERON:0001009!1.98e-18!113;UBERON:0001981!4.83e-18!60;UBERON:0007500!4.83e-18!60;UBERON:0004537!4.83e-18!60;UBERON:0006965!4.83e-18!60;UBERON:0002465!6.04e-18!10;UBERON:0004872!2.83e-15!84;UBERON:0001638!2.39e-14!9;UBERON:0003920!2.39e-14!9;UBERON:0004582!2.39e-14!9;UBERON:0005800!2.73e-11!2;UBERON:0001515!2.73e-11!2;UBERON:0003914!4.69e-11!118;UBERON:0002066!3.90e-10!5;UBERON:0001637!4.35e-10!42;UBERON:0003509!4.35e-10!42;UBERON:0004572!4.35e-10!42;UBERON:0004111!4.09e-09!241;UBERON:0000947!4.44e-08!21;UBERON:0010191!4.44e-08!21;UBERON:0000477!8.83e-07!286;UBERON:0000490!9.78e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0002066;7.36e-45;5!UBERON:0001473;1.12e-28;8!UBERON:0004536;1.12e-28;8!UBERON:0006558;1.12e-28;8!UBERON:0001638;2.47e-25;9!UBERON:0010260;2.47e-25;9!UBERON:0003920;2.47e-25;9!UBERON:0004582;2.47e-25;9!UBERON:0002465;4.09e-23;10!UBERON:0004638;2.47e-22;18!UBERON:0001986;2.47e-22;18!UBERON:0004852;2.47e-22;18!UBERON:0000487;2.23e-18;22!UBERON:0006914;3.09e-16;25!UBERON:0002049;6.12e-11;75!UBERON:0007798;6.12e-11;75!UBERON:0000490;2.66e-10;33!UBERON:0002405;5.14e-09;27!UBERON:0000055;1.22e-08;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,6.33e-45,5;UBERON:0001473,1.12e-28,8;UBERON:0004536,1.12e-28,8;UBERON:0006558,1.12e-28,8;UBERON:0001638,2.27e-25,9;UBERON:0010260,2.27e-25,9;UBERON:0003920,2.27e-25,9;UBERON:0004582,2.27e-25,9;UBERON:0002465,4.10e-23,10;UBERON:0004638,2.27e-22,18;UBERON:0001986,2.27e-22,18;UBERON:0004852,2.27e-22,18;UBERON:0000487,2.09e-18,22;UBERON:0000055,6.69e-18,68;UBERON:0006914,2.91e-16,25;UBERON:0002049,1.29e-15,78;UBERON:0007798,1.29e-15,78;UBERON:0004535,3.49e-11,109;UBERON:0001009,6.96e-11,112;UBERON:0007500,3.93e-07,59;UBERON:0001981,3.93e-07,59;UBERON:0004537,3.93e-07,59;UBERON:0006965,3.93e-07,59 | |||
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|short_description=p@chr12:105863737..105863745,+ | |||
}} |
Revision as of 20:36, 10 September 2013
Short description: | p@chr12:105863737..105863745, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:105863737..105863745, + |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 3.54e-74 | 3 |
endothelial cell of vascular tree | 2.50e-50 | 24 |
lymphangioblast | 6.30e-38 | 6 |
endothelial cell of lymphatic vessel | 6.30e-38 | 6 |
vascular lymphangioblast | 6.30e-38 | 6 |
vein endothelial cell | 1.34e-37 | 6 |
endothelial cell | 1.18e-33 | 36 |
meso-epithelial cell | 5.70e-27 | 45 |
blood vessel endothelial cell | 2.27e-22 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.27e-22 | 18 |
lining cell | 5.77e-21 | 58 |
barrier cell | 5.77e-21 | 58 |
mesodermal cell | 4.51e-10 | 121 |
adipocyte of omentum tissue | 1.81e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical vein | 6.33e-45 | 5 |
lymphatic vessel | 1.12e-28 | 8 |
lymph vasculature | 1.12e-28 | 8 |
lymphatic part of lymphoid system | 1.12e-28 | 8 |
vein | 2.27e-25 | 9 |
umbilical blood vessel | 2.27e-25 | 9 |
venous blood vessel | 2.27e-25 | 9 |
venous system | 2.27e-25 | 9 |
lymphoid system | 4.10e-23 | 10 |
blood vessel endothelium | 2.27e-22 | 18 |
endothelium | 2.27e-22 | 18 |
cardiovascular system endothelium | 2.27e-22 | 18 |
simple squamous epithelium | 2.09e-18 | 22 |
vessel | 6.69e-18 | 68 |
squamous epithelium | 2.91e-16 | 25 |
vasculature | 1.29e-15 | 78 |
vascular system | 1.29e-15 | 78 |
cardiovascular system | 3.49e-11 | 109 |
circulatory system | 6.96e-11 | 112 |
epithelial tube open at both ends | 3.93e-07 | 59 |
blood vessel | 3.93e-07 | 59 |
blood vasculature | 3.93e-07 | 59 |
vascular cord | 3.93e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.