FFCP PHASE1:Hg19::chr12:95612070..95612084,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55591|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18258|TSSclassifier=S|UniProt=|association_with_transcript=-1bp_to_ENST00000546409_5end|description=CAGE_peak_6_at_VEZT_5end|id=chr12:95612070..95612084,+|ontology_enrichment_celltype=CL:0000066!1.93e-17!254;CL:0000077!1.92e-10!19;CL:0000076!5.52e-10!62;CL:0000220!1.77e-09!246;CL:0002321!3.76e-09!248;CL:0002076!5.64e-07!43|ontology_enrichment_celltype_v019=CL:0002327;2.99e-11;4!CL:0000077;9.82e-11;19!CL:0002368;3.21e-08;13!CL:0002166;2.87e-07;3!CL:0000174;5.73e-07;3!CL:0002621;5.73e-07;3!CL:0002076;8.29e-07;42|ontology_enrichment_celltype_v019_2=CL:0000066,8.08e-12,253;CL:0002327,3.16e-11,4;CL:0000077,8.86e-11,19;CL:0002368,3.25e-08,13;CL:0002166,2.67e-07,3;CL:0002621,4.59e-07,3;CL:0000174,5.83e-07,3;CL:0002076,6.45e-07,42|ontology_enrichment_development_v019=UBERON:0009847;7.25e-07;3!UBERON:0003353;7.25e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1324;3.80e-07;15|ontology_enrichment_disease_v019_2=DOID:1324,4.19e-07,15|ontology_enrichment_uberon=UBERON:0005153!2.26e-09!37;UBERON:0005157!4.67e-08!51|ontology_enrichment_uberon_v019=UBERON:0001911;2.99e-11;4!UBERON:0004807;5.47e-09;22!UBERON:0001949;5.73e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0005153,1.82e-12,37;UBERON:0001911,3.16e-11,4;UBERON:0005333,3.16e-11,4;UBERON:0008425,3.16e-11,4;UBERON:0005311,3.16e-11,4;UBERON:0005157,2.40e-09,47;UBERON:0001949,4.59e-07,3;UBERON:0004807,7.35e-07,28|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0.263766978228454,0.495065411840187,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0.125542639594803,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0.552700035571697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0.472674085820339,0,0.175669571386252,0.130979075497713,0,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0,0,0,0.419499436209906,0,0.835979866147242,1.03366703667732,0.71153252537342,0,2.41697590265488,0,0,0.367663080345869,0,0.803697554556718,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0.25326102332916,0.132409180813219,0,1.06400514659507,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.151357427644931,0.576175924479999,0,0,0,0,0.117434498643765,0,0,0.204154171254893,0.368502951935304,0,0,0,0,0,0,0,0,0,0.612975591598039,0,0.113432183160021,0,0,0,0,0.206105058476878,0.257640540045629,0,0.168776332241266,0.487185025805993,0.504867548488229,0.0920498986422993,0.161646056818812,0,0.10075209822764,0.169560592310488,1.73934767846967,3.00020732649918,0.573609190778008,0,0,0,0.207322110030741,0.252320850875628,0.72995471815166,0,0,0,0.464367928031979,0,0,0,0.241011029883482,0,0,0,0,0.392442930250692,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.343135620597051,1.86575485194663,0,0.402115889646523,0.925884451585296,0,0,0,0.115930404975077,0.234817388471643,0.433099343283221,0.925971025153221,0.190254152234598,0,0,0,0,0.148631162288728,0.93733833986777,5.20744597416465,2.55195175036296,3.04498977189684,3.77824120068151,0,3.4486426652716,0,0,0,0,0,0,0,0,0.102827492703324,0.300343057843917,0,0,0,0.36669142910475,0.129271715757778,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0.355391948742546,0,0.602878754119172,1.74306691720059,0.799783929456456,0,0,0,0,1.14861935834114,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0.254094624222463,1.30139853857622,0,0.167516265334349,0,0,0,0,0,1.00034104211935,0.271265023699736,0,0.178428988797162,0.788512075169673,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0,0.434418072340414,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0.519254429183621,0.232420756919918,0.120859449591622,1.60405176242628,0.552485933615378,0.229628896329213,0,0.655622074797121,0,0.847168708148562,0,0,1.16106791782163,0,0.340187410553031,0.431831832204279,0,0,0,0,0,0.223874754722178,0.219259876645935,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0.650060246036521,0,0.096670718292122,0,0,0,0.214840489736547,0,0.0852266274161009,0.356128142586949,1.98341898433174,1.34533047155574,3.06270509987002,0.809262246844399,0,0,0,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0.179872457583315,0,0.353437207037059,0,0,0,0,0.731140468893853,0,0.818999468447914,0.282810863907425,0,0,0.66343897524122,0,0,0,0.202910376962704,0,0,0,0,1.07001315444375,0.354761064070598,0,0,0.75894634753143,0,0.192444225451024,0,1.08890984861323,0.188287601553558,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0.561594356226918,0,0.156679895773023,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0.102268682502155,0.123084805461069,0.933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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55591 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18258 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-1bp_to_ENST00000546409_5end | |||
|description=CAGE_peak_6_at_VEZT_5end | |||
|id=chr12:95612070..95612084,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.93e-17!254;CL:0000077!1.92e-10!19;CL:0000076!5.52e-10!62;CL:0000220!1.77e-09!246;CL:0002321!3.76e-09!248;CL:0002076!5.64e-07!43 | |||
|ontology_enrichment_celltype_v019=CL:0002327;2.99e-11;4!CL:0000077;9.82e-11;19!CL:0002368;3.21e-08;13!CL:0002166;2.87e-07;3!CL:0000174;5.73e-07;3!CL:0002621;5.73e-07;3!CL:0002076;8.29e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.08e-12,253;CL:0002327,3.16e-11,4;CL:0000077,8.86e-11,19;CL:0002368,3.25e-08,13;CL:0002166,2.67e-07,3;CL:0002621,4.59e-07,3;CL:0000174,5.83e-07,3;CL:0002076,6.45e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0009847;7.25e-07;3!UBERON:0003353;7.25e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1324;3.80e-07;15 | |||
|ontology_enrichment_disease_v019_2=DOID:1324,4.19e-07,15 | |||
|ontology_enrichment_uberon=UBERON:0005153!2.26e-09!37;UBERON:0005157!4.67e-08!51 | |||
|ontology_enrichment_uberon_v019=UBERON:0001911;2.99e-11;4!UBERON:0004807;5.47e-09;22!UBERON:0001949;5.73e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005153,1.82e-12,37;UBERON:0001911,3.16e-11,4;UBERON:0005333,3.16e-11,4;UBERON:0008425,3.16e-11,4;UBERON:0005311,3.16e-11,4;UBERON:0005157,2.40e-09,47;UBERON:0001949,4.59e-07,3;UBERON:0004807,7.35e-07,28 | |||
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| |||
|short_description=p6@VEZT | |||
}} |
Revision as of 01:06, 11 September 2013
Short description: | p6@VEZT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_VEZT_5end |
Coexpression cluster: | NA |
Association with transcript: | -1bp_to_ENST00000546409_5end |
EntrezGene: | VEZT |
HGNC: | 18258 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.08e-12 | 253 |
mammary gland epithelial cell | 3.16e-11 | 4 |
mesothelial cell | 8.86e-11 | 19 |
respiratory epithelial cell | 3.25e-08 | 13 |
epithelial cell of Malassez | 2.67e-07 | 3 |
gingival epithelial cell | 4.59e-07 | 3 |
steroid hormone secreting cell | 5.83e-07 | 3 |
endo-epithelial cell | 6.45e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
epithelial bud | 1.82e-12 | 37 |
mammary gland | 3.16e-11 | 4 |
mammary bud | 3.16e-11 | 4 |
mammary ridge | 3.16e-11 | 4 |
mammary placode | 3.16e-11 | 4 |
epithelial fold | 2.40e-09 | 47 |
gingival epithelium | 4.59e-07 | 3 |
respiratory system epithelium | 7.35e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
lung cancer | 4.19e-07 | 15 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.