FFCP PHASE1:Hg19::chr12:72469395..72469445,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C15|description=CAGE_peak_at_chr12:72469395..72469445,+|id=chr12:72469395..72469445,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0002166;8.00e-18;3|ontology_enrichment_celltype_v019_2=CL:0002166,8.00e-18,3|ontology_enrichment_development_v019=UBERON:0004872;2.26e-08;7|ontology_enrichment_disease=DOID:3095!6.04e-08!22;DOID:2994!6.04e-08!22|ontology_enrichment_disease_v019=DOID:4362;3.42e-11;5|ontology_enrichment_disease_v019_2=DOID:4362,3.60e-11,5|ontology_enrichment_uberon=UBERON:0002106!7.87e-11!3;UBERON:0004854!7.87e-11!3;UBERON:0009034!7.87e-11!3;UBERON:0002095!7.87e-11!3;UBERON:0004782!7.87e-11!3;UBERON:0003281!7.87e-11!3;UBERON:0009664!7.87e-11!3;UBERON:0002296!7.87e-11!3;UBERON:0005602!7.87e-11!3;UBERON:0001179!7.87e-11!3;UBERON:0006293!7.87e-11!3;UBERON:0001301!1.59e-08!1|ontology_enrichment_uberon_v019=UBERON:0002106;1.03e-17;3!UBERON:0001708;1.00e-13;4!UBERON:0008895;1.00e-13;4!UBERON:0011159;2.94e-11;5!UBERON:0004177;3.42e-11;5!UBERON:0005057;3.42e-11;5!UBERON:0000002;1.50e-09;6!UBERON:0001560;1.50e-09;6|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.46e-18,3;UBERON:0004854,9.46e-18,3;UBERON:0009034,9.46e-18,3;UBERON:0002095,9.46e-18,3;UBERON:0004782,9.46e-18,3;UBERON:0003281,9.46e-18,3;UBERON:0009664,9.46e-18,3;UBERON:0002296,9.46e-18,3;UBERON:0005602,9.46e-18,3;UBERON:0001179,9.46e-18,3;UBERON:0006293,9.46e-18,3;UBERON:0001708,1.00e-13,4;UBERON:0008895,1.00e-13,4;UBERON:0011159,2.94e-11,5;UBERON:0010188,1.32e-09,6;UBERON:0002539,1.32e-09,6;UBERON:0008816,1.32e-09,6;UBERON:0000002,1.57e-09,6;UBERON:0001560,1.57e-09,6;UBERON:0004177,2.18e-08,7;UBERON:0005057,2.18e-08,7;UBERON:0000945,1.69e-07,8;UBERON:0010039,1.69e-07,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53551746136921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1454023445756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,1.39423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59772660565751,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr12:72469395..72469445,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C15 | |||
|description=CAGE_peak_at_chr12:72469395..72469445,+ | |||
|id=chr12:72469395..72469445,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002166;8.00e-18;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002166,8.00e-18,3 | |||
|ontology_enrichment_development_v019=UBERON:0004872;2.26e-08;7 | |||
|ontology_enrichment_disease=DOID:3095!6.04e-08!22;DOID:2994!6.04e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.42e-11;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.60e-11,5 | |||
|ontology_enrichment_uberon=UBERON:0002106!7.87e-11!3;UBERON:0004854!7.87e-11!3;UBERON:0009034!7.87e-11!3;UBERON:0002095!7.87e-11!3;UBERON:0004782!7.87e-11!3;UBERON:0003281!7.87e-11!3;UBERON:0009664!7.87e-11!3;UBERON:0002296!7.87e-11!3;UBERON:0005602!7.87e-11!3;UBERON:0001179!7.87e-11!3;UBERON:0006293!7.87e-11!3;UBERON:0001301!1.59e-08!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.03e-17;3!UBERON:0001708;1.00e-13;4!UBERON:0008895;1.00e-13;4!UBERON:0011159;2.94e-11;5!UBERON:0004177;3.42e-11;5!UBERON:0005057;3.42e-11;5!UBERON:0000002;1.50e-09;6!UBERON:0001560;1.50e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.46e-18,3;UBERON:0004854,9.46e-18,3;UBERON:0009034,9.46e-18,3;UBERON:0002095,9.46e-18,3;UBERON:0004782,9.46e-18,3;UBERON:0003281,9.46e-18,3;UBERON:0009664,9.46e-18,3;UBERON:0002296,9.46e-18,3;UBERON:0005602,9.46e-18,3;UBERON:0001179,9.46e-18,3;UBERON:0006293,9.46e-18,3;UBERON:0001708,1.00e-13,4;UBERON:0008895,1.00e-13,4;UBERON:0011159,2.94e-11,5;UBERON:0010188,1.32e-09,6;UBERON:0002539,1.32e-09,6;UBERON:0008816,1.32e-09,6;UBERON:0000002,1.57e-09,6;UBERON:0001560,1.57e-09,6;UBERON:0004177,2.18e-08,7;UBERON:0005057,2.18e-08,7;UBERON:0000945,1.69e-07,8;UBERON:0010039,1.69e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53551746136921,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1454023445756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0.110579259931225,0,0,0,1.39423744278603,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.17472666824203,0,0,0.0730893170861856,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436838552768056,0.33946505990805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.455324382702595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59772660565751,0.193373663920732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0.0918948995348449,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:72469395..72469445,+ | |||
}} |
Revision as of 00:23, 11 September 2013
Short description: | p@chr12:72469395..72469445, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:72469395..72469445, + |
Coexpression cluster: | C15_anaplastic_small_skeletal_neuroblastoma_parietal_temporal_tongue |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of Malassez | 8.00e-18 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 9.46e-18 | 3 |
gastrointestinal system mesentery | 9.46e-18 | 3 |
stomach region | 9.46e-18 | 3 |
mesentery | 9.46e-18 | 3 |
gastrointestinal system serosa | 9.46e-18 | 3 |
mesentery of stomach | 9.46e-18 | 3 |
gut mesentery | 9.46e-18 | 3 |
dorsal mesentery | 9.46e-18 | 3 |
dorsal mesogastrium | 9.46e-18 | 3 |
peritoneal cavity | 9.46e-18 | 3 |
spleen primordium | 9.46e-18 | 3 |
jaw skeleton | 1.00e-13 | 4 |
splanchnocranium | 1.00e-13 | 4 |
primary subdivision of cranial skeletal system | 2.94e-11 | 5 |
protuberance | 1.32e-09 | 6 |
pharyngeal arch | 1.32e-09 | 6 |
embryonic head | 1.32e-09 | 6 |
uterine cervix | 1.57e-09 | 6 |
neck of organ | 1.57e-09 | 6 |
hemopoietic organ | 2.18e-08 | 7 |
immune organ | 2.18e-08 | 7 |
stomach | 1.69e-07 | 8 |
food storage organ | 1.69e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.60e-11 | 5 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.