FFCP PHASE1:Hg19::chr12:56110318..56110352,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=2647|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4200|TSSclassifier=S|UniProt=|association_with_transcript=3bp_to_ENST00000548556_5end|description=CAGE_peak_6_at_BLOC1S1_5end|id=chr12:56110318..56110352,+|ontology_enrichment_celltype=CL:0000548!6.69e-13!679;CL:0000004!6.69e-13!679;CL:0000255!6.69e-13!679;CL:0000012!1.00e-12!682;CL:0000055!2.86e-10!180;CL:0000133!4.97e-10!59;CL:0002319!7.27e-09!25;CL:0000144!2.11e-08!625;CL:0000003!6.02e-08!722;CL:0002371!9.79e-08!591;CL:0000333!1.43e-07!41;CL:0000243!1.81e-07!15;CL:0000125!1.81e-07!15;CL:0000030!1.81e-07!15;CL:0000339!1.81e-07!15;CL:0000221!2.62e-07!71|ontology_enrichment_celltype_v019=CL:0002319;2.64e-11;25!CL:0000128;2.02e-10;7!CL:0000126;2.02e-10;7!CL:0000127;2.02e-10;7!CL:0000540;2.65e-08;6!CL:0000404;2.65e-08;6!CL:0000243;2.90e-08;15!CL:0000125;2.90e-08;15!CL:0000095;4.29e-07;17|ontology_enrichment_celltype_v019_2=CL:0002319,1.70e-11,25;CL:0000128,3.22e-10,7;CL:0000126,3.22e-10,7;CL:0000127,3.22e-10,7;CL:0002453,3.22e-10,7;CL:0000133,3.33e-09,59;CL:0000540,1.10e-08,6;CL:0000031,1.10e-08,6;CL:0000404,1.10e-08,6;CL:0000243,3.11e-08,15;CL:0000125,3.11e-08,15;CL:0000030,3.11e-08,15;CL:0000339,3.11e-08,15;CL:0000095,4.54e-07,17;CL:0000123,4.54e-07,17|ontology_enrichment_development_v019=CL:0000031;2.65e-08;6!CL:0000339;2.90e-08;15|ontology_enrichment_disease=DOID:14566!3.07e-08!239;DOID:162!4.13e-07!235|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000019!5.13e-07!19;UBERON:0000047!5.13e-07!19;UBERON:0004088!5.13e-07!19;UBERON:0003072!5.13e-07!19;UBERON:0003071!5.13e-07!19;UBERON:0004128!5.13e-07!19|ontology_enrichment_uberon_v019=UBERON:0000019;8.74e-10;19!UBERON:0000047;8.74e-10;19!UBERON:0004088;8.74e-10;19!UBERON:0010230;8.74e-10;19!UBERON:0000970;4.07e-09;20!UBERON:0002104;1.63e-08;21!UBERON:0001456;1.63e-08;21!UBERON:0000020;1.78e-07;23!UBERON:0001032;5.01e-07;24!UBERON:0004456;5.01e-07;24!UBERON:0007625;5.79e-07;11|ontology_enrichment_uberon_v019_2=UBERON:0000019,4.61e-09,20;UBERON:0000047,4.61e-09,20;UBERON:0010312,4.61e-09,20;UBERON:0004088,4.61e-09,20;UBERON:0010230,4.61e-09,20;UBERON:0003072,4.61e-09,20;UBERON:0004128,4.61e-09,20;UBERON:0003071,4.61e-09,20;UBERON:0000970,1.83e-08,21;UBERON:0002104,1.83e-08,21;UBERON:0001456,6.35e-08,22;UBERON:0005085,1.78e-07,31;UBERON:0000020,5.51e-07,24;UBERON:0001032,5.51e-07,24;UBERON:0004456,5.51e-07,24;UBERON:0007625,6.19e-07,11|phase1_expression=0.181678379270557,0,0,1.0007329835313,0,0,0,0,0.261185628199839,0.245733936501509,2.79120467188971,0.655324116390517,0.791300934685361,1.73272894144065,0.994192127183747,0,0.602694528023977,0,0,2.58554221961255,2.04000691244253,2.19418305034661,2.28988789704845,2.32686522623903,3.76627918784408,2.21598876669059,2.62721886239826,2.67616656466509,0.393364276848904,0,0.154816123316076,0,1.204823675113,0,2.40148321798935,0.710846162437108,0.587200878669695,0,0.401088894940283,0,0.447830948479849,0,0,0.872389432677388,0.377875943688809,0.242584061187816,1.16214518452842,0.411167888021826,0.619412741790207,1.1507695692886,1.7931249457037,0.709446689665756,0.344745680736619,0.645484683583826,0,0.941211697713023,0.272906150057846,0,0.306083892370903,0.320929027076094,0.639337125799041,0.989553900560148,0.797854630486527,0.426224750532694,0.870627715885752,0,0,2.51248665256743,2.08593167368081,0.868755378820466,0.605399502633369,0.368277635987565,0,0.422510572623884,0.212604299965044,0,0.112328631146495,0.150176892841506,0,0.855038231223746,0,0.182664153764634,1.75996244461323,0.546138611262131,0,0.426730222566507,0,0,0,0,0,0,0,0,0,1.05353633910031,0.393419540227666,0.393010762749165,0,0.167186495390678,0,0,0,0.445641827540694,0,0.221533894583621,0.270803863765016,1.15282187753108,0.390178042679635,0.657751618414705,1.38175008892924,0.579606171470105,0,0,0,0.906474741580529,0,0,0.253019692019503,0,0,0,0.150575119077773,0.511946444617674,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0.639312809217652,1.0843174571537,1.00267582127178,1.15877215168659,0,0.486634870302636,4.15953195521899,1.10864698731282,2.28370442802128,0.392937226493138,0.728590576585084,0.741568885568859,0.324547393654683,0,0.26591592103773,0,0,0,0.596287222100115,0,1.73570250803797,0,0,0.550236083880135,0.208994966536811,0,0,0,0,0,0.732186172644509,0,0,0.17859945656816,0.673588117878509,0.675668882899933,0,0,0.732806975721629,0,0,0,0.993943903390637,1.39293562831038,0.662045904066094,0.573673241497627,1.06400514659507,0.560677600142307,0,0.24666754841716,1.24484414159907,0.134710672069688,0.653847612453835,0.454072282934794,0,1.64025002283658,0.936480230490962,0,0.896692083310806,1.87895197830024,0.647491777472526,1.82586048712923,0.816616685019573,1.10550885580591,0.309977343527296,0,0,0.910161361938026,0.718618141816238,2.86171393721913,0.750711119231785,0.554128230968366,0.438977620880838,2.75839016219118,0.600952235626387,0.340296549480063,0.179389635688862,0,0.63579570347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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=2647 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4200 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=3bp_to_ENST00000548556_5end | |||
|description=CAGE_peak_6_at_BLOC1S1_5end | |||
|id=chr12:56110318..56110352,+ | |||
|ontology_enrichment_celltype=CL:0000548!6.69e-13!679;CL:0000004!6.69e-13!679;CL:0000255!6.69e-13!679;CL:0000012!1.00e-12!682;CL:0000055!2.86e-10!180;CL:0000133!4.97e-10!59;CL:0002319!7.27e-09!25;CL:0000144!2.11e-08!625;CL:0000003!6.02e-08!722;CL:0002371!9.79e-08!591;CL:0000333!1.43e-07!41;CL:0000243!1.81e-07!15;CL:0000125!1.81e-07!15;CL:0000030!1.81e-07!15;CL:0000339!1.81e-07!15;CL:0000221!2.62e-07!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.64e-11;25!CL:0000128;2.02e-10;7!CL:0000126;2.02e-10;7!CL:0000127;2.02e-10;7!CL:0000540;2.65e-08;6!CL:0000404;2.65e-08;6!CL:0000243;2.90e-08;15!CL:0000125;2.90e-08;15!CL:0000095;4.29e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.70e-11,25;CL:0000128,3.22e-10,7;CL:0000126,3.22e-10,7;CL:0000127,3.22e-10,7;CL:0002453,3.22e-10,7;CL:0000133,3.33e-09,59;CL:0000540,1.10e-08,6;CL:0000031,1.10e-08,6;CL:0000404,1.10e-08,6;CL:0000243,3.11e-08,15;CL:0000125,3.11e-08,15;CL:0000030,3.11e-08,15;CL:0000339,3.11e-08,15;CL:0000095,4.54e-07,17;CL:0000123,4.54e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000031;2.65e-08;6!CL:0000339;2.90e-08;15 | |||
|ontology_enrichment_disease=DOID:14566!3.07e-08!239;DOID:162!4.13e-07!235 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000019!5.13e-07!19;UBERON:0000047!5.13e-07!19;UBERON:0004088!5.13e-07!19;UBERON:0003072!5.13e-07!19;UBERON:0003071!5.13e-07!19;UBERON:0004128!5.13e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0000019;8.74e-10;19!UBERON:0000047;8.74e-10;19!UBERON:0004088;8.74e-10;19!UBERON:0010230;8.74e-10;19!UBERON:0000970;4.07e-09;20!UBERON:0002104;1.63e-08;21!UBERON:0001456;1.63e-08;21!UBERON:0000020;1.78e-07;23!UBERON:0001032;5.01e-07;24!UBERON:0004456;5.01e-07;24!UBERON:0007625;5.79e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000019,4.61e-09,20;UBERON:0000047,4.61e-09,20;UBERON:0010312,4.61e-09,20;UBERON:0004088,4.61e-09,20;UBERON:0010230,4.61e-09,20;UBERON:0003072,4.61e-09,20;UBERON:0004128,4.61e-09,20;UBERON:0003071,4.61e-09,20;UBERON:0000970,1.83e-08,21;UBERON:0002104,1.83e-08,21;UBERON:0001456,6.35e-08,22;UBERON:0005085,1.78e-07,31;UBERON:0000020,5.51e-07,24;UBERON:0001032,5.51e-07,24;UBERON:0004456,5.51e-07,24;UBERON:0007625,6.19e-07,11 | |||
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| |||
|short_description=p6@BLOC1S1 | |||
}} |
Revision as of 23:27, 10 September 2013
Short description: | p6@BLOC1S1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_BLOC1S1_5end |
Coexpression cluster: | NA |
Association with transcript: | 3bp_to_ENST00000548556_5end |
EntrezGene: | BLOC1S1 |
HGNC: | 4200 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.70e-11 | 25 |
oligodendrocyte | 3.22e-10 | 7 |
macroglial cell | 3.22e-10 | 7 |
astrocyte | 3.22e-10 | 7 |
oligodendrocyte precursor cell | 3.22e-10 | 7 |
neurectodermal cell | 3.33e-09 | 59 |
neuron | 1.10e-08 | 6 |
neuroblast | 1.10e-08 | 6 |
electrically signaling cell | 1.10e-08 | 6 |
glial cell (sensu Vertebrata) | 3.11e-08 | 15 |
glial cell | 3.11e-08 | 15 |
glioblast | 3.11e-08 | 15 |
glioblast (sensu Vertebrata) | 3.11e-08 | 15 |
neuron associated cell | 4.54e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 4.54e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
camera-type eye | 4.61e-09 | 20 |
simple eye | 4.61e-09 | 20 |
immature eye | 4.61e-09 | 20 |
ocular region | 4.61e-09 | 20 |
eyeball of camera-type eye | 4.61e-09 | 20 |
optic cup | 4.61e-09 | 20 |
optic vesicle | 4.61e-09 | 20 |
eye primordium | 4.61e-09 | 20 |
eye | 1.83e-08 | 21 |
visual system | 1.83e-08 | 21 |
face | 6.35e-08 | 22 |
ectodermal placode | 1.78e-07 | 31 |
sense organ | 5.51e-07 | 24 |
sensory system | 5.51e-07 | 24 |
entire sense organ system | 5.51e-07 | 24 |
pigment epithelium of eye | 6.19e-07 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.