FFCP PHASE1:Hg19::chr12:53817633..53817654,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=269|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=465|TSSclassifier=N|UniProt=Q16671,F8W1D2,E9PGD2,Q647K2|association_with_transcript=0bp_to_ENST00000257863,ENST00000550311,NM_001164690,NM_001164691,NM_020547,uc001scx.1,uc009zmy.1_5end|coexpression_cluster_id=C337|description=CAGE_peak_2_at_AMHR2_5end|id=chr12:53817633..53817654,+|ontology_enrichment_celltype=CL:0002274!8.58e-16!5;CL:0000457!8.58e-16!5;CL:0002191!8.58e-16!5;CL:0000097!8.58e-16!5;CL:0000831!8.58e-16!5;CL:0002028!8.58e-16!5;CL:0002322!3.74e-09!5;CL:0000163!8.09e-09!9|ontology_enrichment_celltype_v019=CL:0000746;4.84e-08;3!CL:0000632;7.50e-08;3|ontology_enrichment_celltype_v019_2=CL:0000746,4.84e-08,3;CL:0000513,4.84e-08,3;CL:0000632,6.78e-08,3|ontology_enrichment_development_v019=UBERON:0009117;1.13e-18;10!UBERON:0005564;1.13e-18;10!CL:0000513;4.84e-08;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000991!6.74e-08!21;UBERON:0009196!6.74e-08!21;UBERON:0009117!6.74e-08!21;UBERON:0005564!6.74e-08!21;UBERON:0004176!1.65e-07!22|ontology_enrichment_uberon_v019=UBERON:0005795;6.98e-21;1!UBERON:0000473;5.98e-11;8!UBERON:0000991;3.08e-09;21!UBERON:0003135;3.25e-08;11|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.98e-11,8;UBERON:0000991,3.08e-09,21;UBERON:0009196,3.08e-09,21;UBERON:0009117,3.08e-09,21;UBERON:0005564,3.08e-09,21;UBERON:0004176,7.61e-09,22;UBERON:0003135,3.25e-08,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.616339038092582,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1702205950903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,3.67425652933167,0,0,0.0918948995348449,0,3.86471360913021,3.48353369203032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62758471326295,0,0.201273793591026,0|short_description=p2@AMHR2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=269 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=465 | |||
|TSSclassifier=N | |||
|UniProt=Q16671,F8W1D2,E9PGD2,Q647K2 | |||
|association_with_transcript=0bp_to_ENST00000257863,ENST00000550311,NM_001164690,NM_001164691,NM_020547,uc001scx.1,uc009zmy.1_5end | |||
|coexpression_cluster_id=C337 | |||
|description=CAGE_peak_2_at_AMHR2_5end | |||
|id=chr12:53817633..53817654,+ | |||
|ontology_enrichment_celltype=CL:0002274!8.58e-16!5;CL:0000457!8.58e-16!5;CL:0002191!8.58e-16!5;CL:0000097!8.58e-16!5;CL:0000831!8.58e-16!5;CL:0002028!8.58e-16!5;CL:0002322!3.74e-09!5;CL:0000163!8.09e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000746;4.84e-08;3!CL:0000632;7.50e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,4.84e-08,3;CL:0000513,4.84e-08,3;CL:0000632,6.78e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.13e-18;10!UBERON:0005564;1.13e-18;10!CL:0000513;4.84e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000991!6.74e-08!21;UBERON:0009196!6.74e-08!21;UBERON:0009117!6.74e-08!21;UBERON:0005564!6.74e-08!21;UBERON:0004176!1.65e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0005795;6.98e-21;1!UBERON:0000473;5.98e-11;8!UBERON:0000991;3.08e-09;21!UBERON:0003135;3.25e-08;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.98e-11,8;UBERON:0000991,3.08e-09,21;UBERON:0009196,3.08e-09,21;UBERON:0009117,3.08e-09,21;UBERON:0005564,3.08e-09,21;UBERON:0004176,7.61e-09,22;UBERON:0003135,3.25e-08,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,0,0,0,0,0,0,0,0,0,1.17881167947941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0.132529768321485,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.616339038092582,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.39203086947621,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0.225595660617181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.49487848582361,0.0787831823072236,0.0824158583811665,0,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.926404341482917,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.1702205950903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.813689977576877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.549702583727146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0,3.67425652933167,0,0,0.0918948995348449,0,3.86471360913021,3.48353369203032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62758471326295,0,0.201273793591026,0 | |||
|short_description=p2@AMHR2 | |||
}} |
Revision as of 23:18, 10 September 2013
Short description: | p2@AMHR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_AMHR2_5end |
Coexpression cluster: | C337_ovary_testis_Adipocyte_mesothelioma_chorionic_placenta_spleen |
Association with transcript: | 0bp_to_ENST00000257863, ENST00000550311, NM_001164690, NM_001164691, NM_020547, uc001scx.1, uc009zmy.1_5end |
EntrezGene: | AMHR2 |
HGNC: | 465 |
UniProt: | Q16671F8W1D2E9PGD2Q647K2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 4.84e-08 | 3 |
cardiac muscle myoblast | 4.84e-08 | 3 |
hepatic stellate cell | 6.78e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 5.98e-11 | 8 |
gonad | 3.08e-09 | 21 |
indifferent external genitalia | 3.08e-09 | 21 |
indifferent gonad | 3.08e-09 | 21 |
gonad primordium | 3.08e-09 | 21 |
external genitalia | 7.61e-09 | 22 |
male reproductive organ | 3.25e-08 | 11 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.