FFCP PHASE1:Hg19::chr12:52450779..52450791,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3164|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=7980|TSSclassifier=N|UniProt=|association_with_transcript=-203bp_to_AK096816_5end|coexpression_cluster_id=C70|description=CAGE_peak_51_at_NR4A1_5end|id=chr12:52450779..52450791,+|ontology_enrichment_celltype=CL:0000135!1.08e-17!3;CL:0000386!1.08e-17!3;CL:0000388!1.08e-17!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0008801;1.46e-50;1!UBERON:0006298;3.99e-50;1|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000043!1.08e-17!3;UBERON:0006947!2.50e-17!3;UBERON:0004054!2.50e-17!3;UBERON:0001044!1.56e-15!6;UBERON:0003293!1.56e-15!6;UBERON:0003294!1.56e-15!6;UBERON:0010047!1.56e-15!6;UBERON:0000167!1.56e-15!6;UBERON:0005904!3.95e-13!4;UBERON:0001829!8.63e-13!2;UBERON:0000341!3.00e-12!2;UBERON:0000078!9.18e-11!18;UBERON:0003408!2.35e-09!10;UBERON:0000166!3.87e-09!21;UBERON:0001831!2.95e-07!1;UBERON:0001567!2.95e-07!1;UBERON:0008801!2.95e-07!1;UBERON:0001736!3.32e-07!1;UBERON:0006298!3.32e-07!1;UBERON:0002426!3.52e-07!1;UBERON:0003831!3.52e-07!1;UBERON:0003898!3.52e-07!1;UBERON:0004830!3.52e-07!1;UBERON:0001774!3.52e-07!1;UBERON:0003830!3.52e-07!1;UBERON:0005175!3.52e-07!1;UBERON:0003897!3.52e-07!1;UBERON:0001103!3.52e-07!1;UBERON:0010084!3.52e-07!1;UBERON:0007029!3.73e-07!1;UBERON:0000998!4.18e-07!1;UBERON:0006868!4.18e-07!1;UBERON:0001000!6.24e-07!1;UBERON:0005352!6.24e-07!1;UBERON:0002372!6.60e-07!1;UBERON:0001961!6.60e-07!1;UBERON:0001744!6.60e-07!1;UBERON:0001735!6.60e-07!1|ontology_enrichment_uberon_v019=UBERON:0001829;9.38e-99;2!UBERON:0001044;2.58e-74;6!UBERON:0003293;2.58e-74;6!UBERON:0003294;2.58e-74;6!UBERON:0010047;2.58e-74;6!UBERON:0003408;2.58e-74;6!UBERON:0000167;2.58e-74;6!UBERON:0001831;1.46e-50;1!UBERON:0001567;1.46e-50;1!UBERON:0001736;3.99e-50;1!UBERON:0002426;6.58e-50;1!UBERON:0003831;6.58e-50;1!UBERON:0003898;6.58e-50;1!UBERON:0004830;6.58e-50;1!UBERON:0003830;6.58e-50;1!UBERON:0005175;6.58e-50;1!UBERON:0001774;6.58e-50;1!UBERON:0001103;6.58e-50;1!UBERON:0001041;1.46e-32;14!UBERON:0004089;4.32e-26;2!UBERON:0005090;9.18e-26;2!UBERON:0001630;9.18e-26;2!UBERON:0000161;2.73e-24;19!UBERON:0000166;2.73e-24;19!UBERON:0000165;8.05e-17;28!UBERON:0002365;5.88e-15;31!UBERON:0002330;5.88e-15;31!UBERON:0004921;1.57e-12;33!UBERON:0001004;6.98e-10;65!UBERON:0007811;1.88e-08;52!UBERON:0000153;7.84e-08;54!UBERON:0000033;8.98e-08;50!UBERON:0001555;3.67e-07;54!UBERON:0001444;3.73e-07;48!UBERON:0002530;7.34e-07;57|ontology_enrichment_uberon_v019_2=UBERON:0001829,9.38e-99,2;UBERON:0001044,2.58e-74,6;UBERON:0003293,2.58e-74,6;UBERON:0003294,2.58e-74,6;UBERON:0010047,2.58e-74,6;UBERON:0000167,2.58e-74,6;UBERON:0001831,1.46e-50,1;UBERON:0001567,1.46e-50,1;UBERON:0008801,1.46e-50,1;UBERON:0001736,3.99e-50,1;UBERON:0006298,3.99e-50,1;UBERON:0002426,6.58e-50,1;UBERON:0003831,6.58e-50,1;UBERON:0003898,6.58e-50,1;UBERON:0004830,6.58e-50,1;UBERON:0003830,6.58e-50,1;UBERON:0005175,6.58e-50,1;UBERON:0001774,6.58e-50,1;UBERON:0001103,6.58e-50,1;UBERON:0010084,6.58e-50,1;UBERON:0003408,4.18e-45,10;UBERON:0004089,4.32e-26,2;UBERON:0005090,9.18e-26,2;UBERON:0001630,9.18e-26,2;UBERON:0000166,3.99e-21,22;UBERON:0000165,2.82e-16,29;UBERON:0000930,2.82e-16,29;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002553,7.99e-14,61;UBERON:0000161,2.66e-13,36;UBERON:0001004,1.50e-11,74;UBERON:0001444,5.14e-10,49;UBERON:0000033,7.15e-09,56;UBERON:0002530,1.83e-08,59;UBERON:0000153,4.28e-08,62;UBERON:0007811,4.28e-08,62|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275673144969061,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6051552945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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=3164 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7980 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-203bp_to_AK096816_5end | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_51_at_NR4A1_5end | |||
|id=chr12:52450779..52450791,+ | |||
|ontology_enrichment_celltype=CL:0000135!1.08e-17!3;CL:0000386!1.08e-17!3;CL:0000388!1.08e-17!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.46e-50;1!UBERON:0006298;3.99e-50;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!1.08e-17!3;UBERON:0006947!2.50e-17!3;UBERON:0004054!2.50e-17!3;UBERON:0001044!1.56e-15!6;UBERON:0003293!1.56e-15!6;UBERON:0003294!1.56e-15!6;UBERON:0010047!1.56e-15!6;UBERON:0000167!1.56e-15!6;UBERON:0005904!3.95e-13!4;UBERON:0001829!8.63e-13!2;UBERON:0000341!3.00e-12!2;UBERON:0000078!9.18e-11!18;UBERON:0003408!2.35e-09!10;UBERON:0000166!3.87e-09!21;UBERON:0001831!2.95e-07!1;UBERON:0001567!2.95e-07!1;UBERON:0008801!2.95e-07!1;UBERON:0001736!3.32e-07!1;UBERON:0006298!3.32e-07!1;UBERON:0002426!3.52e-07!1;UBERON:0003831!3.52e-07!1;UBERON:0003898!3.52e-07!1;UBERON:0004830!3.52e-07!1;UBERON:0001774!3.52e-07!1;UBERON:0003830!3.52e-07!1;UBERON:0005175!3.52e-07!1;UBERON:0003897!3.52e-07!1;UBERON:0001103!3.52e-07!1;UBERON:0010084!3.52e-07!1;UBERON:0007029!3.73e-07!1;UBERON:0000998!4.18e-07!1;UBERON:0006868!4.18e-07!1;UBERON:0001000!6.24e-07!1;UBERON:0005352!6.24e-07!1;UBERON:0002372!6.60e-07!1;UBERON:0001961!6.60e-07!1;UBERON:0001744!6.60e-07!1;UBERON:0001735!6.60e-07!1 | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0001829,9.38e-99,2;UBERON:0001044,2.58e-74,6;UBERON:0003293,2.58e-74,6;UBERON:0003294,2.58e-74,6;UBERON:0010047,2.58e-74,6;UBERON:0000167,2.58e-74,6;UBERON:0001831,1.46e-50,1;UBERON:0001567,1.46e-50,1;UBERON:0008801,1.46e-50,1;UBERON:0001736,3.99e-50,1;UBERON:0006298,3.99e-50,1;UBERON:0002426,6.58e-50,1;UBERON:0003831,6.58e-50,1;UBERON:0003898,6.58e-50,1;UBERON:0004830,6.58e-50,1;UBERON:0003830,6.58e-50,1;UBERON:0005175,6.58e-50,1;UBERON:0001774,6.58e-50,1;UBERON:0001103,6.58e-50,1;UBERON:0010084,6.58e-50,1;UBERON:0003408,4.18e-45,10;UBERON:0004089,4.32e-26,2;UBERON:0005090,9.18e-26,2;UBERON:0001630,9.18e-26,2;UBERON:0000166,3.99e-21,22;UBERON:0000165,2.82e-16,29;UBERON:0000930,2.82e-16,29;UBERON:0002365,2.73e-15,31;UBERON:0002330,2.73e-15,31;UBERON:0002553,7.99e-14,61;UBERON:0000161,2.66e-13,36;UBERON:0001004,1.50e-11,74;UBERON:0001444,5.14e-10,49;UBERON:0000033,7.15e-09,56;UBERON:0002530,1.83e-08,59;UBERON:0000153,4.28e-08,62;UBERON:0007811,4.28e-08,62 | |||
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|short_description=p51@NR4A1 | |||
}} |
Revision as of 23:06, 10 September 2013
Short description: | p51@NR4A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_51_at_NR4A1_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | -203bp_to_AK096816_5end |
EntrezGene: | NR4A1 |
HGNC: | 7980 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
major salivary gland | 9.38e-99 | 2 |
saliva-secreting gland | 2.58e-74 | 6 |
gland of oral region | 2.58e-74 | 6 |
gland of foregut | 2.58e-74 | 6 |
oral gland | 2.58e-74 | 6 |
oral cavity | 2.58e-74 | 6 |
parotid gland | 1.46e-50 | 1 |
cheek | 1.46e-50 | 1 |
parotid gland primordium | 1.46e-50 | 1 |
submandibular gland | 3.99e-50 | 1 |
submandibular gland primordium | 3.99e-50 | 1 |
chest muscle | 6.58e-50 | 1 |
respiratory system muscle | 6.58e-50 | 1 |
skeletal muscle of trunk | 6.58e-50 | 1 |
respiratory system skeletal muscle | 6.58e-50 | 1 |
thoracic segment muscle | 6.58e-50 | 1 |
chest organ | 6.58e-50 | 1 |
muscle of trunk | 6.58e-50 | 1 |
diaphragm | 6.58e-50 | 1 |
future diaphragm | 6.58e-50 | 1 |
gland of gut | 4.18e-45 | 10 |
midface | 4.32e-26 | 2 |
muscle structure | 9.18e-26 | 2 |
muscle organ | 9.18e-26 | 2 |
oral opening | 3.99e-21 | 22 |
mouth | 2.82e-16 | 29 |
stomodeum | 2.82e-16 | 29 |
exocrine gland | 2.73e-15 | 31 |
exocrine system | 2.73e-15 | 31 |
anatomical cavity | 7.99e-14 | 61 |
orifice | 2.66e-13 | 36 |
respiratory system | 1.50e-11 | 74 |
subdivision of head | 5.14e-10 | 49 |
head | 7.15e-09 | 56 |
gland | 1.83e-08 | 59 |
anterior region of body | 4.28e-08 | 62 |
craniocervical region | 4.28e-08 | 62 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.