FFCP PHASE1:Hg19::chr12:49687394..49687406,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5630|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9461|TSSclassifier=S|UniProt=P41219|association_with_transcript=-78bp_to_ENST00000257860_5end|description=CAGE_peak_6_at_PRPH_5end|id=chr12:49687394..49687406,+|ontology_enrichment_celltype=CL:0000242!2.61e-08!2|ontology_enrichment_celltype_v019=CL:0000333;9.93e-21;5!CL:0002535;7.30e-14;2!CL:0002321;1.44e-07;15|ontology_enrichment_celltype_v019_2=CL:0002535,7.30e-14,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:5409!1.37e-08!4;DOID:3095!1.57e-07!22;DOID:2994!1.57e-07!22;DOID:0050687!2.26e-07!143|ontology_enrichment_disease_v019=DOID:6193;9.79e-26;1!DOID:169;1.85e-17;6!DOID:154;1.00e-13;2!DOID:4236;1.00e-13;2!DOID:3350;1.37e-13;2!DOID:171;6.94e-11;10!DOID:3095;8.06e-11;22!DOID:2994;8.06e-11;22!DOID:3119;4.49e-08;14|ontology_enrichment_disease_v019_2=DOID:6193,7.62e-26,1;DOID:169,1.85e-17,6;DOID:154,9.40e-14,2;DOID:4236,9.40e-14,2;DOID:3350,1.21e-13,2;DOID:171,6.94e-11,10;DOID:3095,8.20e-11,22;DOID:2994,8.20e-11,22;DOID:0050687,1.64e-08,143;DOID:3119,4.66e-08,14|ontology_enrichment_uberon=UBERON:0002298!1.26e-07!8|ontology_enrichment_uberon_v019=UBERON:0000013;9.93e-21;5!UBERON:0002410;9.93e-21;5!UBERON:0006955;7.30e-14;2!UBERON:0004801;7.30e-14;2!UBERON:0000010;5.52e-12;8|ontology_enrichment_uberon_v019_2=UBERON:0000013,9.93e-21,5;UBERON:0002410,9.93e-21,5;UBERON:0006955,7.30e-14,2;UBERON:0004801,7.30e-14,2;UBERON:0000010,5.52e-12,8|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53478946137697,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,7.92909758455369,1.45802306691627,2.08349993919951,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.970722711091971,0,0,0,0,1.89184635718778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0.271808412147228,0.523014231561666,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01909471910709,0,1.85656384926424,0,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0,0,0,0,0,0,0,0.215927591218621,0,0.357382720883282,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0.11294608203896,0.109940516745429,0.452888530700021,0,0.655678681511872,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,2.02717601618299,0,0.26721740526556,0,0,0,0,0,0,0,0.714193294391221,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0|short_description=p6@PRPH}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=5630 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9461 | |||
|TSSclassifier=S | |||
|UniProt=P41219 | |||
|association_with_transcript=-78bp_to_ENST00000257860_5end | |||
|description=CAGE_peak_6_at_PRPH_5end | |||
|id=chr12:49687394..49687406,+ | |||
|ontology_enrichment_celltype=CL:0000242!2.61e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000333;9.93e-21;5!CL:0002535;7.30e-14;2!CL:0002321;1.44e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,7.30e-14,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:5409!1.37e-08!4;DOID:3095!1.57e-07!22;DOID:2994!1.57e-07!22;DOID:0050687!2.26e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:6193;9.79e-26;1!DOID:169;1.85e-17;6!DOID:154;1.00e-13;2!DOID:4236;1.00e-13;2!DOID:3350;1.37e-13;2!DOID:171;6.94e-11;10!DOID:3095;8.06e-11;22!DOID:2994;8.06e-11;22!DOID:3119;4.49e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,7.62e-26,1;DOID:169,1.85e-17,6;DOID:154,9.40e-14,2;DOID:4236,9.40e-14,2;DOID:3350,1.21e-13,2;DOID:171,6.94e-11,10;DOID:3095,8.20e-11,22;DOID:2994,8.20e-11,22;DOID:0050687,1.64e-08,143;DOID:3119,4.66e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002298!1.26e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;9.93e-21;5!UBERON:0002410;9.93e-21;5!UBERON:0006955;7.30e-14;2!UBERON:0004801;7.30e-14;2!UBERON:0000010;5.52e-12;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,9.93e-21,5;UBERON:0002410,9.93e-21,5;UBERON:0006955,7.30e-14,2;UBERON:0004801,7.30e-14,2;UBERON:0000010,5.52e-12,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.53478946137697,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,7.92909758455369,1.45802306691627,2.08349993919951,0,0,0,0,0,0,0.10893846351899,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0,0,0,0,0,0,0.970722711091971,0,0,0,0,1.89184635718778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248505071130865,0,0.271808412147228,0.523014231561666,0,0,0,0,0,0,0,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0.517131825446202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.332787154610557,0.18628920882415,0,0,0,0,0,0.468334905806882,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.01909471910709,0,1.85656384926424,0,0,0.495743057036009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0,0,0,0.271878931907327,0,0,0,0,0,0,0,0.215927591218621,0,0.357382720883282,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.596852325484105,0,0.11294608203896,0.109940516745429,0.452888530700021,0,0.655678681511872,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,0,0,0,0,0.126166424835079,0.109265571963696,2.02717601618299,0,0.26721740526556,0,0,0,0,0,0,0,0.714193294391221,0,0,0.112131862580613,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0.406896178315738,0,0.201273793591026,0 | |||
|short_description=p6@PRPH | |||
}} |
Revision as of 22:53, 10 September 2013
Short description: | p6@PRPH |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_PRPH_5end |
Coexpression cluster: | NA |
Association with transcript: | -78bp_to_ENST00000257860_5end |
EntrezGene: | PRPH |
HGNC: | 9461 |
UniProt: | P41219 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 7.30e-14 | 2 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 9.93e-21 | 5 |
autonomic nervous system | 9.93e-21 | 5 |
uterine epithelium | 7.30e-14 | 2 |
cervix epithelium | 7.30e-14 | 2 |
peripheral nervous system | 5.52e-12 | 8 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 7.62e-26 | 1 |
neuroendocrine tumor | 1.85e-17 | 6 |
mixed cell type cancer | 9.40e-14 | 2 |
carcinosarcoma | 9.40e-14 | 2 |
mesenchymal cell neoplasm | 1.21e-13 | 2 |
neuroectodermal tumor | 6.94e-11 | 10 |
germ cell and embryonal cancer | 8.20e-11 | 22 |
germ cell cancer | 8.20e-11 | 22 |
cell type cancer | 1.64e-08 | 143 |
gastrointestinal system cancer | 4.66e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.