FFCP PHASE1:Hg19::chr12:48276681..48276692,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=7421|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=12679|TSSclassifier=S|UniProt=F8VVY8|association_with_transcript=25bp_to_ENST00000550314_5end|coexpression_cluster_id=C21|description=CAGE_peak_11_at_VDR_5end|id=chr12:48276681..48276692,-|ontology_enrichment_celltype=CL:0000080!3.57e-09!6;CL:0002621!5.07e-08!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:0060060!5.13e-07!1;DOID:0060061!5.13e-07!1;DOID:8691!5.13e-07!1;DOID:0060085!7.60e-07!1;DOID:3165!7.60e-07!1;DOID:0060121!7.60e-07!1;DOID:2438!7.60e-07!1;DOID:4418!7.60e-07!1|ontology_enrichment_disease_v019=DOID:3493;9.18e-26;2|ontology_enrichment_disease_v019_2=DOID:3493,9.18e-26,2|ontology_enrichment_uberon=UBERON:0002331!8.32e-14!10;UBERON:0000358!8.32e-14!10;UBERON:0000307!8.32e-14!10;UBERON:0000091!8.32e-14!10;UBERON:0000087!8.32e-14!10;UBERON:0007806!8.32e-14!10;UBERON:0008780!8.32e-14!10;UBERON:0005728!8.32e-14!10;UBERON:0001949!5.07e-08!3;UBERON:0001301!6.08e-07!1;UBERON:0007029!6.43e-07!1|ontology_enrichment_uberon_v019=UBERON:0002331;4.18e-45;10!UBERON:0000178;1.81e-30;15!UBERON:0000179;1.81e-30;15!UBERON:0000463;1.81e-30;15!UBERON:0000478;1.88e-19;24!UBERON:0002390;5.87e-15;32!UBERON:0000922;9.51e-10;49!UBERON:0002193;7.33e-07;42|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.18e-45,10;UBERON:0000358,4.18e-45,10;UBERON:0000307,4.18e-45,10;UBERON:0000091,4.18e-45,10;UBERON:0000087,4.18e-45,10;UBERON:0007010,4.18e-45,10;UBERON:0007806,4.18e-45,10;UBERON:0008780,4.18e-45,10;UBERON:0005728,4.18e-45,10;UBERON:0000178,1.81e-30,15;UBERON:0000179,1.81e-30,15;UBERON:0000463,1.81e-30,15;UBERON:0000478,1.88e-19,24|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.358234090811393,0,0,0,0.792435906119034,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,3.85477467284809,6.67245270311115,3.9680340812073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,1.21917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p11@VDR}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=7421 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12679 | |||
|TSSclassifier=S | |||
|UniProt=F8VVY8 | |||
|association_with_transcript=25bp_to_ENST00000550314_5end | |||
|coexpression_cluster_id=C21 | |||
|description=CAGE_peak_11_at_VDR_5end | |||
|id=chr12:48276681..48276692,- | |||
|ontology_enrichment_celltype=CL:0000080!3.57e-09!6;CL:0002621!5.07e-08!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0060060!5.13e-07!1;DOID:0060061!5.13e-07!1;DOID:8691!5.13e-07!1;DOID:0060085!7.60e-07!1;DOID:3165!7.60e-07!1;DOID:0060121!7.60e-07!1;DOID:2438!7.60e-07!1;DOID:4418!7.60e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;9.18e-26;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,9.18e-26,2 | |||
|ontology_enrichment_uberon=UBERON:0002331!8.32e-14!10;UBERON:0000358!8.32e-14!10;UBERON:0000307!8.32e-14!10;UBERON:0000091!8.32e-14!10;UBERON:0000087!8.32e-14!10;UBERON:0007806!8.32e-14!10;UBERON:0008780!8.32e-14!10;UBERON:0005728!8.32e-14!10;UBERON:0001949!5.07e-08!3;UBERON:0001301!6.08e-07!1;UBERON:0007029!6.43e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002331;4.18e-45;10!UBERON:0000178;1.81e-30;15!UBERON:0000179;1.81e-30;15!UBERON:0000463;1.81e-30;15!UBERON:0000478;1.88e-19;24!UBERON:0002390;5.87e-15;32!UBERON:0000922;9.51e-10;49!UBERON:0002193;7.33e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,4.18e-45,10;UBERON:0000358,4.18e-45,10;UBERON:0000307,4.18e-45,10;UBERON:0000091,4.18e-45,10;UBERON:0000087,4.18e-45,10;UBERON:0007010,4.18e-45,10;UBERON:0007806,4.18e-45,10;UBERON:0008780,4.18e-45,10;UBERON:0005728,4.18e-45,10;UBERON:0000178,1.81e-30,15;UBERON:0000179,1.81e-30,15;UBERON:0000463,1.81e-30,15;UBERON:0000478,1.88e-19,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289803085735052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0.358234090811393,0,0,0,0.792435906119034,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0.43050537267123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,3.85477467284809,6.67245270311115,3.9680340812073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,0,0,0.397429223405979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0,0,0.999936979274649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,1.21917924982269,0,0,0,0.485710993059139,0,0,0,0,0,0,0.308696632431779,0,0,0,0,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p11@VDR | |||
}} |
Revision as of 22:48, 10 September 2013
Short description: | p11@VDR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_VDR_5end |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | 25bp_to_ENST00000550314_5end |
EntrezGene: | VDR |
HGNC: | 12679 |
UniProt: | F8VVY8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
umbilical cord | 4.18e-45 | 10 |
blastocyst | 4.18e-45 | 10 |
blastula | 4.18e-45 | 10 |
bilaminar disc | 4.18e-45 | 10 |
inner cell mass | 4.18e-45 | 10 |
cleaving embryo | 4.18e-45 | 10 |
connecting stalk | 4.18e-45 | 10 |
inner cell mass derived epiblast | 4.18e-45 | 10 |
extraembryonic mesoderm | 4.18e-45 | 10 |
blood | 1.81e-30 | 15 |
haemolymphatic fluid | 1.81e-30 | 15 |
organism substance | 1.81e-30 | 15 |
extraembryonic structure | 1.88e-19 | 24 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 9.18e-26 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.