FFCP PHASE1:Hg19::chr12:44152551..44152600,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83448|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=25276|TSSclassifier=S|UniProt=Q9H0K6,F8VP66,F8VWC0,F8VW99,F8VZA0|association_with_transcript=0bp_to_ENST00000416848,ENST00000431332,ENST00000547156,ENST00000549868,ENST00000550784,ENST00000551923,ENST00000553166,NM_001098614,NM_001098615,NM_031292,uc001rnq.3,uc001rnr.3,uc001rns.3,uc009zkb.2_5end|description=CAGE_peak_1_at_PUS7L_5end|id=chr12:44152551..44152600,-|ontology_enrichment_celltype=CL:0000542!2.21e-08!53;CL:0000051!2.21e-08!53;CL:0000838!5.88e-08!52|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000542,2.21e-08,53;CL:0000051,2.21e-08,53;CL:0000838,5.88e-08,52|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:14566!1.34e-14!239;DOID:162!4.26e-14!235;DOID:0050686!2.81e-10!137;DOID:2531!6.80e-10!51;DOID:0060083!6.80e-10!51;DOID:1240!1.11e-08!39;DOID:305!1.79e-07!106;DOID:0050687!3.93e-07!143|ontology_enrichment_disease_v019=DOID:1240;1.03e-07;39|ontology_enrichment_disease_v019_2=DOID:14566,1.34e-14,239;DOID:162,4.26e-14,235;DOID:0050686,2.81e-10,137;DOID:2531,6.80e-10,51;DOID:0060083,6.80e-10,51;DOID:1240,1.11e-08,39;DOID:305,1.79e-07,106;DOID:0050687,3.93e-07,143|ontology_enrichment_uberon=UBERON:0002780!8.96e-09!41;UBERON:0001890!8.96e-09!41;UBERON:0006240!8.96e-09!41;UBERON:0001049!9.26e-09!57;UBERON:0005068!9.26e-09!57;UBERON:0006241!9.26e-09!57;UBERON:0007135!9.26e-09!57;UBERON:0001017!1.06e-08!82;UBERON:0000073!2.44e-08!94;UBERON:0001016!2.44e-08!94;UBERON:0003080!3.11e-08!42;UBERON:0005743!6.28e-08!86;UBERON:0002616!8.26e-08!59;UBERON:0000955!1.07e-07!69;UBERON:0006238!1.07e-07!69;UBERON:0002020!3.38e-07!34;UBERON:0003528!3.38e-07!34|ontology_enrichment_uberon_v019=UBERON:0002780;9.49e-07;41!UBERON:0001890;9.49e-07;41|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.94e-09,89;UBERON:0001049,3.24e-09,56;UBERON:0005068,3.24e-09,56;UBERON:0006241,3.24e-09,56;UBERON:0007135,3.24e-09,56;UBERON:0001017,4.62e-09,81;UBERON:0002780,8.96e-09,41;UBERON:0001890,8.96e-09,41;UBERON:0003080,8.96e-09,41;UBERON:0006240,8.96e-09,41;UBERON:0000073,1.81e-08,53;UBERON:0002616,1.81e-08,53;UBERON:0000955,4.60e-08,68;UBERON:0006238,4.60e-08,68;UBERON:0011216,1.99e-07,223;UBERON:0003528,3.37e-07,34;UBERON:0002020,3.37e-07,34;UBERON:0002791,9.11e-07,32|phase1_expression=9.08391896352783,7.27941781229343,14.518303621885,10.007329835313,5.81049422755474,5.23403114460221,2.53299878168311,6.94891860769514,3.91778442299758,5.16041266653169,2.79120467188971,5.02415155899396,1.84636884759917,15.842093178886,3.97676850873499,10.7572023432284,8.43772339233568,4.38186054232424,4.39139518911456,5.78668972960903,2.44800829493104,0.940364164434263,15.4567433050771,11.0868284309036,7.15593045690376,27.6616528807584,25.8616856767329,28.8081459608066,1.96682138424452,11.8987113410136,4.33485145285013,8.27479102031034,1.8072355126695,2.21852406100073,25.951512194401,27.5808311025598,16.4416246027514,2.76997704265939,3.00816671205213,3.03815219002193,19.0328153103936,16.8424706329869,18.8030164372956,5.81592955118259,1.51150377475524,3.63876091781724,2.55671940596253,1.23350366406548,2.16794459626573,1.1507695692886,2.30544635876191,4.96612682766029,3.44745680736619,4.51839278508678,1.35426486594342,3.01187743268168,2.45615535052061,5.8428105955722,3.36692281607993,4.17207735198922,3.83602275479425,3.62836430205388,3.78980949481101,2.55734850319616,2.03146467040009,0.56738522469114,1.86846674698672,1.25624332628372,3.65038042894141,4.99534342821768,2.42159801053347,1.10483290796269,1.89877432464531,9.71774317034932,8.71677629856678,7.75736988380991,11.0082058523565,8.25972910628285,16.072558669708,7.12531859353121,6.16641699317179,8.40255107317316,19.3595868907455,15.2918811153397,27.5747868697702,13.6553671221282,18.8186113906926,12.0698012390441,15.8650769468367,15.2648600725658,10.8150464130795,9.39579502993502,9.93910393125595,18.5039860010636,4.48406850385229,14.2227405778542,18.2940086205865,10.6112905942274,12.130488440971,19.5608199607093,13.3628129319772,8.5220605032252,13.6378709885538,15.0404116794984,10.6058126690941,15.2858387262699,16.519035689666,11.2720361358594,11.4452225852693,11.8395291314647,10.5013006758622,22.025034515864,20.3152591532023,21.403266247177,14.6349733326968,21.6420844552351,13.0294967824653,12.3705880373747,27.0731070460868,16.8839669591771,17.5792532541233,19.0090408889675,21.8333922662771,28.4130276762809,21.2382235138988,22.4938389441816,16.4225599384209,16.9349664308775,9.62784704820626,9.70323506014753,14.6284119788377,8.04841031644363,8.82251676720359,11.5660528763061,6.51739283826656,4.49024208778554,8.74814541756209,6.8128881842369,20.0413812387824,11.7516580655159,9.22265249777823,4.12584087817795,1.09288586487763,2.59549109949101,8.76277962867645,10.7960437125546,5.18536046023574,8.58566247499231,8.00792875092179,11.5151825412165,6.16163462836786,5.16140757063675,1.73570250803797,1.69592382577203,5.87299210693868,3.5765345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10.1061007526556,14.7084925470892,28.339315265117,29.0533623484015,13.5376800398898,37.0545393445926,4.42606415770994,26.1590545923599,21.4154130388732,27.1869180247841,6.1344256140825,12.4731446994742,6.3539116382686,4.95796724107317,8.97467903878131,10.5425597721626,19.2538440574099,20.7756220764626,8.59665412356402,21.7382556419581,8.84368354554522,17.2991620873943,11.3463142158903,19.5269524653462,36.1701893877072,8.94162923734086,36.1003373952025,10.4168975702865,8.9318012110073,5.80375106386748,5.11049710558381,21.9637752710098,41.0266141106965,33.3831082330147,43.2558163567465,10.9103915300046,16.708928195588,13.8905287644309,21.2065566887715,5.26182188502793,13.3559040198884,18.0194871065152,14.3642359916441,34.0940830117724,10.9306143692378,12.7842220871329,31.0935731354815,12.4215438850633,6.86174824095901,30.1805998409508,11.3916596860763,10.7792128827599,8.81882501203278,13.4690506705974,5.97514669828825,5.53007729451273,4.73250094702305,24.2580601497659,33.6592948798673,16.5120949574462,19.9322975633324,4.03268301363616,9.55538938977433,8.05359108944105,20.5133988255858,29.5041378457092,4.53200186031526,5.0304775359561,9.27851545070559,22.3427056807204,11.6969731731053,15.5181604625867,11.0595684423139,29.1400891660517,14.8419697606329,11.7751017982005,15.0489608310492,9.39806110167016,23.5158648180761,12.0122677659414,18.8541237681301,23.5570160537934,25.5459904281294,13.1023275550854,7.13693881688831,18.3268640060714,3.99638905436179,24.3856420456827,21.4264726326789,10.5868461514708,14.9248942041853,8.76403665895821,17.4317127693725,18.3474666433858,29.029967443546,4.55542984279128,36.6534579885917,17.9869125775236,14.5078057085033,6.47045880083986,12.5461703015899,12.1119767841676,20.6511931011385,21.4120466709328,8.66905052806845,25.6528709054938,29.6820525497549,27.5778293221613,10.5332390523353,6.43113912374828,16.5833887891756,20.9968981599647,16.4190166063755,13.8077370248969,19.5058507704738,16.0773510026272,8.74628528128785,11.6474299649042,9.70162506999453,12.4098546301268,7.1868993227909,5.45551629418159,18.7912178128812,10.6451314094724,16.8504766024717,14.0880096558584,17.3765054058246,14.1025567307341,9.38563769613817,11.4906957531894,12.2068853494722,7.98908129022615,10.0636896795513,7.37307532297436|short_description=p1@PUS7L}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=83448 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25276 | |||
|TSSclassifier=S | |||
|UniProt=Q9H0K6,F8VP66,F8VWC0,F8VW99,F8VZA0 | |||
|association_with_transcript=0bp_to_ENST00000416848,ENST00000431332,ENST00000547156,ENST00000549868,ENST00000550784,ENST00000551923,ENST00000553166,NM_001098614,NM_001098615,NM_031292,uc001rnq.3,uc001rnr.3,uc001rns.3,uc009zkb.2_5end | |||
|description=CAGE_peak_1_at_PUS7L_5end | |||
|id=chr12:44152551..44152600,- | |||
|ontology_enrichment_celltype=CL:0000542!2.21e-08!53;CL:0000051!2.21e-08!53;CL:0000838!5.88e-08!52 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,2.21e-08,53;CL:0000051,2.21e-08,53;CL:0000838,5.88e-08,52 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!1.34e-14!239;DOID:162!4.26e-14!235;DOID:0050686!2.81e-10!137;DOID:2531!6.80e-10!51;DOID:0060083!6.80e-10!51;DOID:1240!1.11e-08!39;DOID:305!1.79e-07!106;DOID:0050687!3.93e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.03e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,1.34e-14,239;DOID:162,4.26e-14,235;DOID:0050686,2.81e-10,137;DOID:2531,6.80e-10,51;DOID:0060083,6.80e-10,51;DOID:1240,1.11e-08,39;DOID:305,1.79e-07,106;DOID:0050687,3.93e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002780!8.96e-09!41;UBERON:0001890!8.96e-09!41;UBERON:0006240!8.96e-09!41;UBERON:0001049!9.26e-09!57;UBERON:0005068!9.26e-09!57;UBERON:0006241!9.26e-09!57;UBERON:0007135!9.26e-09!57;UBERON:0001017!1.06e-08!82;UBERON:0000073!2.44e-08!94;UBERON:0001016!2.44e-08!94;UBERON:0003080!3.11e-08!42;UBERON:0005743!6.28e-08!86;UBERON:0002616!8.26e-08!59;UBERON:0000955!1.07e-07!69;UBERON:0006238!1.07e-07!69;UBERON:0002020!3.38e-07!34;UBERON:0003528!3.38e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.49e-07;41!UBERON:0001890;9.49e-07;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.94e-09,89;UBERON:0001049,3.24e-09,56;UBERON:0005068,3.24e-09,56;UBERON:0006241,3.24e-09,56;UBERON:0007135,3.24e-09,56;UBERON:0001017,4.62e-09,81;UBERON:0002780,8.96e-09,41;UBERON:0001890,8.96e-09,41;UBERON:0003080,8.96e-09,41;UBERON:0006240,8.96e-09,41;UBERON:0000073,1.81e-08,53;UBERON:0002616,1.81e-08,53;UBERON:0000955,4.60e-08,68;UBERON:0006238,4.60e-08,68;UBERON:0011216,1.99e-07,223;UBERON:0003528,3.37e-07,34;UBERON:0002020,3.37e-07,34;UBERON:0002791,9.11e-07,32 | |||
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| |||
|short_description=p1@PUS7L | |||
}} |
Revision as of 22:39, 10 September 2013
Short description: | p1@PUS7L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PUS7L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000416848, ENST00000431332, ENST00000547156, ENST00000549868, ENST00000550784, ENST00000551923, ENST00000553166, NM_001098614, NM_001098615, NM_031292, uc001rnq.3, uc001rnr.3, uc001rns.3, uc009zkb.2_5end |
EntrezGene: | PUS7L |
HGNC: | 25276 |
UniProt: | Q9H0K6F8VP66F8VWC0F8VW99F8VZA0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 2.21e-08 | 53 |
common lymphoid progenitor | 2.21e-08 | 53 |
lymphoid lineage restricted progenitor cell | 5.88e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
nervous system | 1.94e-09 | 89 |
neural tube | 3.24e-09 | 56 |
neural rod | 3.24e-09 | 56 |
future spinal cord | 3.24e-09 | 56 |
neural keel | 3.24e-09 | 56 |
central nervous system | 4.62e-09 | 81 |
regional part of forebrain | 8.96e-09 | 41 |
forebrain | 8.96e-09 | 41 |
anterior neural tube | 8.96e-09 | 41 |
future forebrain | 8.96e-09 | 41 |
regional part of nervous system | 1.81e-08 | 53 |
regional part of brain | 1.81e-08 | 53 |
brain | 4.60e-08 | 68 |
future brain | 4.60e-08 | 68 |
organ system subdivision | 1.99e-07 | 223 |
brain grey matter | 3.37e-07 | 34 |
gray matter | 3.37e-07 | 34 |
regional part of telencephalon | 9.11e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 1.34e-14 | 239 |
cancer | 4.26e-14 | 235 |
organ system cancer | 2.81e-10 | 137 |
hematologic cancer | 6.80e-10 | 51 |
immune system cancer | 6.80e-10 | 51 |
leukemia | 1.11e-08 | 39 |
carcinoma | 1.79e-07 | 106 |
cell type cancer | 3.93e-07 | 143 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.