FFCP PHASE1:Hg19::chr12:13248562..13248595,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=83445|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=19716|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000457134,ENST00000537302_5end|coexpression_cluster_id=C87|description=CAGE_peak_4_at_GSG1_5end|id=chr12:13248562..13248595,-|ontology_enrichment_celltype=CL:0000057!1.63e-11!75;CL:0000055!3.19e-11!180;CL:0000048!3.89e-08!430;CL:0000723!4.73e-08!436;CL:0000034!9.04e-08!444|ontology_enrichment_celltype_v019=CL:0000746;1.81e-07;3!CL:0000632;2.87e-07;3|ontology_enrichment_celltype_v019_2=CL:0000746,1.75e-07,3;CL:0000513,1.75e-07,3;CL:0000632,3.11e-07,3|ontology_enrichment_development_v019=UBERON:0003056;1.61e-07;3!CL:0000513;1.81e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019=UBERON:0001905;1.64e-11;2!UBERON:0002757;1.64e-11;2!UBERON:0010134;1.64e-11;2!UBERON:0005408;1.64e-11;2!UBERON:0001899;1.64e-11;2|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.64e-11,2;UBERON:0002757,1.64e-11,2;UBERON:0010134,1.64e-11,2;UBERON:0005408,1.64e-11,2;UBERON:0001899,1.64e-11,2|phase1_expression=0.54503513781167,0.214100523890983,0.845726424575827,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0,0.256160706529101,0.709446689665756,0,0,0,0,0,0,0,0.320929027076094,0,0.659702600373432,0.398927315243264,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,2.55725123687061,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,1.45650098894541,0.573673241497627,0,2.24271040056923,0,0.24666754841716,0.622422070799533,0,0,0,0,0,0,1.1409436430889,0.747243402759005,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0,0,0,1.90738711043606,0.900273288253207,0.309157587715317,0.257640540045629,0.37223371266318,0,0,0,0.920498986422993,0,0.355009592516614,0.503760491138201,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,2.08014873822732,0,1.41849132023278,0,0,1.62786481617433,0,0,0,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,3.61953266668948,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.473107245101804,0,0.601892199455438,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,1.66580894032411,0,0.160853921143607,4.45254199334973,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0.462145851343933,0,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,2.75999310504886,0,0,0,0,0,1.25924938732256,0,0,0.532306030317022,0,0,0,0,0,0,1.02359116524534,0,0.318203247925937,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1779441085319,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0.47003968731907,0,0,0,0.201799707191048,0,3.43505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41320361269025,0,0,0,0,0,0,0,6.3621765174652,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93774963014692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.418411385249333,0,0,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77987976358325,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,22.1357815897969,0,0,0,0,0,0.28984205722165,0.149254802886874,0,0,0,0,0,1.37304041038154,0.302461847526478,0,0.147855149989634,0.63718706865481,0.449803112163605,0.310525913752519,0.414706207840855,0,0,0,0,0,0.181848659202559,0,3.24823631914946,2.78667122089031,3.20022211730523,0,0,1.26184898228651,0,0.428883182749851,0.260994291965212,0,0,0,0,0.617602894321944,1.31570429747224,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=83445 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19716 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000457134,ENST00000537302_5end | |||
|coexpression_cluster_id=C87 | |||
|description=CAGE_peak_4_at_GSG1_5end | |||
|id=chr12:13248562..13248595,- | |||
|ontology_enrichment_celltype=CL:0000057!1.63e-11!75;CL:0000055!3.19e-11!180;CL:0000048!3.89e-08!430;CL:0000723!4.73e-08!436;CL:0000034!9.04e-08!444 | |||
|ontology_enrichment_celltype_v019=CL:0000746;1.81e-07;3!CL:0000632;2.87e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000746,1.75e-07,3;CL:0000513,1.75e-07,3;CL:0000632,3.11e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.61e-07;3!CL:0000513;1.81e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;1.64e-11;2!UBERON:0002757;1.64e-11;2!UBERON:0010134;1.64e-11;2!UBERON:0005408;1.64e-11;2!UBERON:0001899;1.64e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.64e-11,2;UBERON:0002757,1.64e-11,2;UBERON:0010134,1.64e-11,2;UBERON:0005408,1.64e-11,2;UBERON:0001899,1.64e-11,2 | |||
|phase1_expression=0.54503513781167,0.214100523890983,0.845726424575827,0,0.446961094427288,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0.145398238779565,0.377875943688809,0.242584061187816,0,0,0,0,0.256160706529101,0.709446689665756,0,0,0,0,0,0,0,0.320929027076094,0,0.659702600373432,0.398927315243264,0.426224750532694,0,0,0,0.251248665256743,0.521482918420201,0.217188844705117,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0.670700859703636,2.55725123687061,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.25326102332916,1.45650098894541,0.573673241497627,0,2.24271040056923,0,0.24666754841716,0.622422070799533,0,0,0,0,0,0,1.1409436430889,0.747243402759005,0.117434498643765,0,0,0.204154171254893,0.122834317311768,0.206651562351531,0,0,0,0,0,0.250237039743928,0.277064115484183,0,0,0,0,0,0,1.90738711043606,0.900273288253207,0.309157587715317,0.257640540045629,0.37223371266318,0,0,0,0.920498986422993,0,0.355009592516614,0.503760491138201,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,2.057870056657,1.47008711385542,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.594524649154913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,2.08014873822732,0,1.41849132023278,0,0,1.62786481617433,0,0,0,0,0,0,0,0,0.502257091432126,0,0.239624855491583,0,0,3.61953266668948,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.535286966391485,0.473107245101804,0,0.601892199455438,0,1.03473071292505,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,1.66580894032411,0,0.160853921143607,4.45254199334973,0.308419387605311,0,0.164254312027618,0,0.116210378459959,0,0,0,0.229628896329213,0.364182336013434,0.131124414959424,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0.254876273045038,0,0.447749509444357,0,0,0,0,0,0,0,0,0,0,1.6068392984416,0,0.462145851343933,0,0.137836572484531,0.107420244868274,0.145016693914229,0.255679882248303,2.75999310504886,0,0,0,0,0,1.25924938732256,0,0,0.532306030317022,0,0,0,0,0,0,1.02359116524534,0,0.318203247925937,0,0.539617372749944,0.274537029736055,0.117812402345686,0,0,0,0.975267478179181,0,0,0,0,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0.987884678879706,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.1779441085319,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0.47003968731907,0,0,0,0.201799707191048,0,3.43505344755765,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0.307160702099232,0,0,0,0.16480387422676,0,0,0,0,0,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41320361269025,0,0,0,0,0,0,0,6.3621765174652,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0.549585560411174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23840590304675,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93774963014692,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135904206073614,0.418411385249333,0,0,0,0,0,2.57859264851974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77987976358325,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,22.1357815897969,0,0,0,0,0,0.28984205722165,0.149254802886874,0,0,0,0,0,1.37304041038154,0.302461847526478,0,0.147855149989634,0.63718706865481,0.449803112163605,0.310525913752519,0.414706207840855,0,0,0,0,0,0.181848659202559,0,3.24823631914946,2.78667122089031,3.20022211730523,0,0,1.26184898228651,0,0.428883182749851,0.260994291965212,0,0,0,0,0.617602894321944,1.31570429747224,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0.640150378164845,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0.318004350653419,0,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.781514011233092,0,0,0,0,0,0,0,0,0,0,0,0,93.7478212787002,145.610851720751,0,0,0.266107110487916,0,0.171488009437418,0,0,0,0,0,0,0,0,0.431855182437243,0,1.92986669276972,214.582484733043,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.6392577253528,0,0,0,0,0,6.15666893774403,0,0.617393264863557,0,0,0,0,0.196308467114945,0,0,0,0,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0.462175628631418,2.16313281061895,0.126166424835079,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.640364075266293,0,0,0,0,0,0,0,0 | |||
|short_description=p4@GSG1 | |||
}} |
Revision as of 21:47, 10 September 2013
Short description: | p4@GSG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_GSG1_5end |
Coexpression cluster: | C87_retinoblastoma_left_nonsmall_heart_small_diaphragm_bronchogenic |
Association with transcript: | 0bp_to_ENST00000457134, ENST00000537302_5end |
EntrezGene: | GSG1 |
HGNC: | 19716 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac muscle cell | 1.75e-07 | 3 |
cardiac muscle myoblast | 1.75e-07 | 3 |
hepatic stellate cell | 3.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.64e-11 | 2 |
regional part of epithalamus | 1.64e-11 | 2 |
secretory circumventricular organ | 1.64e-11 | 2 |
circumventricular organ | 1.64e-11 | 2 |
epithalamus | 1.64e-11 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.