FFCP PHASE1:Hg19::chr12:7281797..7281808,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=9746|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=18371|TSSclassifier=W|UniProt=F5H172|association_with_transcript=-485bp_to_ENST00000541953_5end|coexpression_cluster_id=C5|description=CAGE_peak_9_at_CLSTN3_5end|id=chr12:7281797..7281808,+|ontology_enrichment_celltype=CL:0000181!5.47e-17!12;CL:0000417!5.47e-17!12;CL:0000668!5.47e-17!12;CL:0000414!5.47e-17!12;CL:0000412!5.47e-17!12;CL:0000182!5.47e-17!12;CL:0000223!7.89e-08!59|ontology_enrichment_celltype_v019=CL:0000182;3.29e-19;12!CL:0002262;1.55e-13;2!CL:1000398;1.55e-13;2|ontology_enrichment_celltype_v019_2=CL:0000182,3.09e-19,12;CL:0002262,1.55e-13,2;CL:1000398,1.55e-13,2|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!2.05e-24!26;UBERON:0002107!3.10e-14!19;UBERON:0006925!3.10e-14!19;UBERON:0008836!3.10e-14!19;UBERON:0003929!9.52e-13!54;UBERON:0005172!9.95e-13!55;UBERON:0005173!9.95e-13!55;UBERON:0004177!1.04e-12!7;UBERON:0008835!3.63e-12!22;UBERON:0003894!3.63e-12!22;UBERON:0002368!8.44e-12!35;UBERON:0009854!1.35e-11!23;UBERON:0002417!3.06e-11!61;UBERON:0000916!3.06e-11!61;UBERON:0002365!7.19e-11!31;UBERON:0002330!7.19e-11!31;UBERON:0007499!1.35e-10!25;UBERON:0009497!1.35e-10!25;UBERON:0000015!1.35e-10!25;UBERON:0002423!1.35e-10!25;UBERON:0006235!1.35e-10!25;UBERON:0004161!1.35e-10!25;UBERON:0009856!3.76e-10!26;UBERON:0002530!1.22e-09!59;UBERON:0007023!6.67e-09!115;UBERON:0000949!7.70e-09!45;UBERON:0004921!8.61e-09!129;UBERON:0004185!8.61e-09!129;UBERON:0002106!2.80e-08!3;UBERON:0004854!2.80e-08!3;UBERON:0009034!2.80e-08!3;UBERON:0002095!2.80e-08!3;UBERON:0004782!2.80e-08!3;UBERON:0003281!2.80e-08!3;UBERON:0009664!2.80e-08!3;UBERON:0002296!2.80e-08!3;UBERON:0005602!2.80e-08!3;UBERON:0001179!2.80e-08!3;UBERON:0006293!2.80e-08!3;UBERON:0005911!1.33e-07!82;UBERON:0002134!3.78e-07!1;UBERON:0005208!3.78e-07!1;UBERON:0005946!3.78e-07!1;UBERON:0005965!3.78e-07!1;UBERON:0002078!3.78e-07!1;UBERON:0001301!4.01e-07!1;UBERON:0000029!4.51e-07!1;UBERON:0009569!4.71e-07!113;UBERON:0006834!6.76e-07!1;UBERON:0004119!8.46e-07!169;UBERON:0000925!8.46e-07!169;UBERON:0006595!8.46e-07!169;UBERON:0001007!9.37e-07!155;UBERON:0001555!9.37e-07!155;UBERON:0007026!9.37e-07!155|ontology_enrichment_uberon_v019=UBERON:0002107;2.86e-21;19!UBERON:0006925;2.86e-21;19!UBERON:0002423;2.69e-16;25!UBERON:0002365;1.15e-13;31!UBERON:0002330;1.15e-13;31!UBERON:0001281;1.55e-13;2!UBERON:0003497;1.55e-13;2!UBERON:0003909;1.55e-13;2!UBERON:0003835;1.55e-13;2!UBERON:0002368;1.69e-10;33!UBERON:0001280;1.81e-09;3!UBERON:0004647;1.81e-09;3!UBERON:0005172;3.10e-08;52!UBERON:0005173;3.10e-08;52!UBERON:0000949;3.23e-08;43!UBERON:0002417;5.70e-08;58!UBERON:0000916;5.70e-08;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.58e-21,19;UBERON:0006925,2.58e-21,19;UBERON:0008836,2.58e-21,19;UBERON:0008835,1.74e-18,22;UBERON:0003894,1.74e-18,22;UBERON:0009854,1.05e-17,23;UBERON:0007499,2.48e-16,25;UBERON:0009497,2.48e-16,25;UBERON:0000015,2.48e-16,25;UBERON:0002423,2.48e-16,25;UBERON:0006235,2.48e-16,25;UBERON:0004161,2.48e-16,25;UBERON:0009856,1.01e-15,26;UBERON:0001281,1.55e-13,2;UBERON:0003497,1.55e-13,2;UBERON:0003909,1.55e-13,2;UBERON:0003835,1.55e-13,2;UBERON:0002365,2.88e-13,31;UBERON:0002330,2.88e-13,31;UBERON:0002368,8.37e-12,35;UBERON:0005172,9.21e-12,54;UBERON:0005173,9.21e-12,54;UBERON:0002417,1.31e-10,60;UBERON:0000916,1.31e-10,60;UBERON:0001280,1.81e-09,3;UBERON:0004647,1.81e-09,3;UBERON:0005171,1.81e-09,3;UBERON:0000949,2.83e-09,45;UBERON:0003929,8.61e-08,54;UBERON:0002530,3.68e-07,59|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07800827419625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,8.87285243752816,0,2.95394953340702,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.88514832613622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35359501941948,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.787139999965761,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2846095460297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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=9746 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18371 | |||
|TSSclassifier=W | |||
|UniProt=F5H172 | |||
|association_with_transcript=-485bp_to_ENST00000541953_5end | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_9_at_CLSTN3_5end | |||
|id=chr12:7281797..7281808,+ | |||
|ontology_enrichment_celltype=CL:0000181!5.47e-17!12;CL:0000417!5.47e-17!12;CL:0000668!5.47e-17!12;CL:0000414!5.47e-17!12;CL:0000412!5.47e-17!12;CL:0000182!5.47e-17!12;CL:0000223!7.89e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.29e-19;12!CL:0002262;1.55e-13;2!CL:1000398;1.55e-13;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.09e-19,12;CL:0002262,1.55e-13,2;CL:1000398,1.55e-13,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!2.05e-24!26;UBERON:0002107!3.10e-14!19;UBERON:0006925!3.10e-14!19;UBERON:0008836!3.10e-14!19;UBERON:0003929!9.52e-13!54;UBERON:0005172!9.95e-13!55;UBERON:0005173!9.95e-13!55;UBERON:0004177!1.04e-12!7;UBERON:0008835!3.63e-12!22;UBERON:0003894!3.63e-12!22;UBERON:0002368!8.44e-12!35;UBERON:0009854!1.35e-11!23;UBERON:0002417!3.06e-11!61;UBERON:0000916!3.06e-11!61;UBERON:0002365!7.19e-11!31;UBERON:0002330!7.19e-11!31;UBERON:0007499!1.35e-10!25;UBERON:0009497!1.35e-10!25;UBERON:0000015!1.35e-10!25;UBERON:0002423!1.35e-10!25;UBERON:0006235!1.35e-10!25;UBERON:0004161!1.35e-10!25;UBERON:0009856!3.76e-10!26;UBERON:0002530!1.22e-09!59;UBERON:0007023!6.67e-09!115;UBERON:0000949!7.70e-09!45;UBERON:0004921!8.61e-09!129;UBERON:0004185!8.61e-09!129;UBERON:0002106!2.80e-08!3;UBERON:0004854!2.80e-08!3;UBERON:0009034!2.80e-08!3;UBERON:0002095!2.80e-08!3;UBERON:0004782!2.80e-08!3;UBERON:0003281!2.80e-08!3;UBERON:0009664!2.80e-08!3;UBERON:0002296!2.80e-08!3;UBERON:0005602!2.80e-08!3;UBERON:0001179!2.80e-08!3;UBERON:0006293!2.80e-08!3;UBERON:0005911!1.33e-07!82;UBERON:0002134!3.78e-07!1;UBERON:0005208!3.78e-07!1;UBERON:0005946!3.78e-07!1;UBERON:0005965!3.78e-07!1;UBERON:0002078!3.78e-07!1;UBERON:0001301!4.01e-07!1;UBERON:0000029!4.51e-07!1;UBERON:0009569!4.71e-07!113;UBERON:0006834!6.76e-07!1;UBERON:0004119!8.46e-07!169;UBERON:0000925!8.46e-07!169;UBERON:0006595!8.46e-07!169;UBERON:0001007!9.37e-07!155;UBERON:0001555!9.37e-07!155;UBERON:0007026!9.37e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.86e-21;19!UBERON:0006925;2.86e-21;19!UBERON:0002423;2.69e-16;25!UBERON:0002365;1.15e-13;31!UBERON:0002330;1.15e-13;31!UBERON:0001281;1.55e-13;2!UBERON:0003497;1.55e-13;2!UBERON:0003909;1.55e-13;2!UBERON:0003835;1.55e-13;2!UBERON:0002368;1.69e-10;33!UBERON:0001280;1.81e-09;3!UBERON:0004647;1.81e-09;3!UBERON:0005172;3.10e-08;52!UBERON:0005173;3.10e-08;52!UBERON:0000949;3.23e-08;43!UBERON:0002417;5.70e-08;58!UBERON:0000916;5.70e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.58e-21,19;UBERON:0006925,2.58e-21,19;UBERON:0008836,2.58e-21,19;UBERON:0008835,1.74e-18,22;UBERON:0003894,1.74e-18,22;UBERON:0009854,1.05e-17,23;UBERON:0007499,2.48e-16,25;UBERON:0009497,2.48e-16,25;UBERON:0000015,2.48e-16,25;UBERON:0002423,2.48e-16,25;UBERON:0006235,2.48e-16,25;UBERON:0004161,2.48e-16,25;UBERON:0009856,1.01e-15,26;UBERON:0001281,1.55e-13,2;UBERON:0003497,1.55e-13,2;UBERON:0003909,1.55e-13,2;UBERON:0003835,1.55e-13,2;UBERON:0002365,2.88e-13,31;UBERON:0002330,2.88e-13,31;UBERON:0002368,8.37e-12,35;UBERON:0005172,9.21e-12,54;UBERON:0005173,9.21e-12,54;UBERON:0002417,1.31e-10,60;UBERON:0000916,1.31e-10,60;UBERON:0001280,1.81e-09,3;UBERON:0004647,1.81e-09,3;UBERON:0005171,1.81e-09,3;UBERON:0000949,2.83e-09,45;UBERON:0003929,8.61e-08,54;UBERON:0002530,3.68e-07,59 | |||
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|short_description=p9@CLSTN3 | |||
}} |
Revision as of 00:24, 11 September 2013
Short description: | p9@CLSTN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_CLSTN3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -485bp_to_ENST00000541953_5end |
EntrezGene: | CLSTN3 |
HGNC: | 18371 |
UniProt: | F5H172 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.09e-19 | 12 |
endothelial cell of sinusoid | 1.55e-13 | 2 |
endothelial cell of hepatic sinusoid | 1.55e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
liver | 2.58e-21 | 19 |
digestive gland | 2.58e-21 | 19 |
liver bud | 2.58e-21 | 19 |
hepatic diverticulum | 1.74e-18 | 22 |
liver primordium | 1.74e-18 | 22 |
digestive tract diverticulum | 1.05e-17 | 23 |
epithelial sac | 2.48e-16 | 25 |
epithelium of foregut-midgut junction | 2.48e-16 | 25 |
anatomical boundary | 2.48e-16 | 25 |
hepatobiliary system | 2.48e-16 | 25 |
foregut-midgut junction | 2.48e-16 | 25 |
septum transversum | 2.48e-16 | 25 |
sac | 1.01e-15 | 26 |
hepatic sinusoid | 1.55e-13 | 2 |
abdomen blood vessel | 1.55e-13 | 2 |
sinusoid | 1.55e-13 | 2 |
abdominal segment blood vessel | 1.55e-13 | 2 |
exocrine gland | 2.88e-13 | 31 |
exocrine system | 2.88e-13 | 31 |
endocrine gland | 8.37e-12 | 35 |
abdomen element | 9.21e-12 | 54 |
abdominal segment element | 9.21e-12 | 54 |
abdominal segment of trunk | 1.31e-10 | 60 |
abdomen | 1.31e-10 | 60 |
liver parenchyma | 1.81e-09 | 3 |
liver lobule | 1.81e-09 | 3 |
hepatic duct | 1.81e-09 | 3 |
endocrine system | 2.83e-09 | 45 |
gut epithelium | 8.61e-08 | 54 |
gland | 3.68e-07 | 59 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.