FFCP PHASE1:Hg19::chr12:6874654..6874678,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=5763|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=9629|TSSclassifier=S|UniProt=|association_with_transcript=-3bp_to_ENST00000540667_5end|coexpression_cluster_id=C14|description=CAGE_peak_17_at_PTMS_5end|id=chr12:6874654..6874678,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000764;1.81e-11;2!CL:0000558;1.81e-11;2|ontology_enrichment_celltype_v019_2=CL:0000764,1.82e-11,2;CL:0000765,1.82e-11,2;CL:0000050,1.82e-11,2;CL:0000038,1.82e-11,2;CL:0000558,1.82e-11,2;CL:0000547,1.82e-11,2;CL:0000549,1.82e-11,2;CL:0000550,1.82e-11,2;CL:0000552,1.82e-11,2|ontology_enrichment_development_v019=UBERON:0006215;5.95e-15;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:1036;8.71e-10;8|ontology_enrichment_disease_v019_2=DOID:1036,6.08e-10,8|ontology_enrichment_uberon=UBERON:0007023!5.59e-13!115;UBERON:0000178!3.40e-07!15;UBERON:0000179!3.40e-07!15;UBERON:0000463!3.40e-07!15;UBERON:0004733!4.36e-07!12;UBERON:0002028!4.36e-07!12;UBERON:0007277!4.36e-07!12|ontology_enrichment_uberon_v019=UBERON:0000178;2.90e-26;15!UBERON:0000179;2.90e-26;15!UBERON:0000463;2.90e-26;15!UBERON:0002390;4.52e-13;32!UBERON:0001905;4.71e-11;2!UBERON:0002757;4.71e-11;2!UBERON:0010134;4.71e-11;2!UBERON:0005408;4.71e-11;2!UBERON:0001899;4.71e-11;2!UBERON:0002037;1.04e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.92e-26,15;UBERON:0000179,2.92e-26,15;UBERON:0000463,2.92e-26,15;UBERON:0007023,2.09e-11,114;UBERON:0001905,4.49e-11,2;UBERON:0002757,4.49e-11,2;UBERON:0010134,4.49e-11,2;UBERON:0005408,4.49e-11,2;UBERON:0001899,4.49e-11,2;UBERON:0002037,1.14e-07,6;UBERON:0006215,1.14e-07,6|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12101712596307,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0,0.087834785693126,0.130979075497713,0,0,0,0,0,0,0,0,0.39752481473341,0,0.347140501607594,0,0.419499436209906,0,0,0,0,0,0.402829317109147,0.760272105718513,0.24406205754817,0,0.81014194788176,0.0892997282840798,0,0.112611480483322,1.53316637465883,0,0.183201743930407,0,0,0,0,0.25326102332916,0.132409180813219,0,0.354668382198357,1.68203280042692,0,0.49333509683432,0,0,0,0,0,0.234321431833797,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453728732640084,0.179389635688862,0,0.211931901159562,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.386521706326594,0.545492241181669,0.286804595389004,0,0.132529768321485,0.116193942869518,0.10366105501537,0.252320850875628,0,0,0,0,0,0.721879481669586,0,0.168584690078102,0,0,0,0,0,0.196221465125346,0.38474715694639,0,0,0.8231480226628,0,2.53510069643662,0,0,0,0.122988438543114,0,0,0,0.201057944823262,0,0,0,0,0,0.117408694235822,0.288732895522148,0,0,0,0,0,0,0,0,0.335964256397719,0,0.0895585227028483,0,0,0,0.088048434013226,0,0,0,0,0.381988425558278,0,0,0,0.300343057843917,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,1.74306691720059,0.399891964728228,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0.30239029332968,0,0,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0,0.355123450626254,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0.0770153371044148,0.784349769176855,0,0,0,0,0,0,0,0.501689773854853,0,0,0,76.960216702723,73.463361737997,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0.165284915360978,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,1.10273068709225,0,0,0,0,0,0,0,0,0.196498082026242,0.35667105148125,0,0,0,0,0,0.0962221127255121,0,0,0.564862804660675,0.43050537267123,0,0,0,76.1171413848254,99.4028369285088,52.9771884071971,40.4994018278241,32.9089818468955,53.1748115178028,73.9843069016217,72.1743910427786,0.213648142254946,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67043704337145,3.69262196843137,0.270455678475983,0.33307196799782,0,0.18714054040822,0,0,0,0.568272293612826,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0.597743964753209,0,0,0.306806047506464,0,0,0.179736702294654,0,0,0,11.974154617347,0,0,0,0,0,0.174919999992391,0,0,0,0,0,0,0,0,0,1.52581736317083,4.31259113731776,1.47773809476774,0.658156191461918,0,0,0.153900517007594,0,0,1.34636466614658,0.217294743844016,0.638002319463839,0.0915975934018623,0,0,0,0.166211681900156,3.38393490925771,1.9606253431774,2.01385904371011,1.70778359451767,0.158936578980379,0.210998064528027,0,0,0,0,0.176915129006678,0,0,0,0,0.06740113298067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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=5763 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9629 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-3bp_to_ENST00000540667_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_17_at_PTMS_5end | |||
|id=chr12:6874654..6874678,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.81e-11;2!CL:0000558;1.81e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.82e-11,2;CL:0000765,1.82e-11,2;CL:0000050,1.82e-11,2;CL:0000038,1.82e-11,2;CL:0000558,1.82e-11,2;CL:0000547,1.82e-11,2;CL:0000549,1.82e-11,2;CL:0000550,1.82e-11,2;CL:0000552,1.82e-11,2 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.95e-15;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1036;8.71e-10;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,6.08e-10,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!5.59e-13!115;UBERON:0000178!3.40e-07!15;UBERON:0000179!3.40e-07!15;UBERON:0000463!3.40e-07!15;UBERON:0004733!4.36e-07!12;UBERON:0002028!4.36e-07!12;UBERON:0007277!4.36e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.90e-26;15!UBERON:0000179;2.90e-26;15!UBERON:0000463;2.90e-26;15!UBERON:0002390;4.52e-13;32!UBERON:0001905;4.71e-11;2!UBERON:0002757;4.71e-11;2!UBERON:0010134;4.71e-11;2!UBERON:0005408;4.71e-11;2!UBERON:0001899;4.71e-11;2!UBERON:0002037;1.04e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.92e-26,15;UBERON:0000179,2.92e-26,15;UBERON:0000463,2.92e-26,15;UBERON:0007023,2.09e-11,114;UBERON:0001905,4.49e-11,2;UBERON:0002757,4.49e-11,2;UBERON:0010134,4.49e-11,2;UBERON:0005408,4.49e-11,2;UBERON:0001899,4.49e-11,2;UBERON:0002037,1.14e-07,6;UBERON:0006215,1.14e-07,6 | |||
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| |||
|short_description=p17@PTMS | |||
}} |
Revision as of 00:05, 11 September 2013
Short description: | p17@PTMS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_17_at_PTMS_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -3bp_to_ENST00000540667_5end |
EntrezGene: | PTMS |
HGNC: | 9629 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.82e-11 | 2 |
erythroblast | 1.82e-11 | 2 |
megakaryocyte-erythroid progenitor cell | 1.82e-11 | 2 |
erythroid progenitor cell | 1.82e-11 | 2 |
reticulocyte | 1.82e-11 | 2 |
proerythroblast | 1.82e-11 | 2 |
basophilic erythroblast | 1.82e-11 | 2 |
polychromatophilic erythroblast | 1.82e-11 | 2 |
orthochromatic erythroblast | 1.82e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 2.92e-26 | 15 |
haemolymphatic fluid | 2.92e-26 | 15 |
organism substance | 2.92e-26 | 15 |
adult organism | 2.09e-11 | 114 |
pineal body | 4.49e-11 | 2 |
regional part of epithalamus | 4.49e-11 | 2 |
secretory circumventricular organ | 4.49e-11 | 2 |
circumventricular organ | 4.49e-11 | 2 |
epithalamus | 4.49e-11 | 2 |
cerebellum | 1.14e-07 | 6 |
rhombic lip | 1.14e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 6.08e-10 | 8 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.