FFCP PHASE1:Hg19::chr11:123524532..123524556,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=55800|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=20665|TSSclassifier=S|UniProt=|association_with_transcript=-20bp_to_HQ258123_5end|coexpression_cluster_id=C3|description=CAGE_peak_5_at_SCN3B_5end|id=chr11:123524532..123524556,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0006601;6.31e-17;82|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!8.64e-90!57;UBERON:0005068!8.64e-90!57;UBERON:0006241!8.64e-90!57;UBERON:0007135!8.64e-90!57;UBERON:0002780!6.82e-87!41;UBERON:0001890!6.82e-87!41;UBERON:0006240!6.82e-87!41;UBERON:0003080!1.16e-84!42;UBERON:0001017!2.26e-79!82;UBERON:0005743!9.85e-79!86;UBERON:0002616!1.17e-77!59;UBERON:0000073!3.20e-77!94;UBERON:0001016!3.20e-77!94;UBERON:0001893!2.07e-76!34;UBERON:0001869!5.26e-76!32;UBERON:0002020!8.54e-76!34;UBERON:0003528!8.54e-76!34;UBERON:0000955!1.89e-75!69;UBERON:0006238!1.89e-75!69;UBERON:0002791!4.57e-73!33;UBERON:0003075!5.16e-69!86;UBERON:0007284!5.16e-69!86;UBERON:0002346!1.68e-65!90;UBERON:0003056!5.09e-63!61;UBERON:0002619!1.51e-62!22;UBERON:0001950!3.30e-56!20;UBERON:0000956!1.17e-54!25;UBERON:0000203!1.17e-54!25;UBERON:0007023!6.24e-50!115;UBERON:0000033!3.56e-47!123;UBERON:0000153!1.65e-44!129;UBERON:0007811!1.65e-44!129;UBERON:0004121!4.85e-44!169;UBERON:0000924!9.03e-43!173;UBERON:0006601!9.03e-43!173;UBERON:0002420!9.42e-23!9;UBERON:0007245!9.42e-23!9;UBERON:0010009!9.42e-23!9;UBERON:0010011!9.42e-23!9;UBERON:0000454!9.42e-23!9;UBERON:0002308!4.67e-22!9;UBERON:0000125!4.67e-22!9;UBERON:0000200!3.95e-21!6;UBERON:0000025!1.01e-20!194;UBERON:0001871!1.26e-20!7;UBERON:0002021!1.60e-17!5;UBERON:0000349!1.60e-17!5;UBERON:0009663!1.13e-16!7;UBERON:0004111!1.14e-16!241;UBERON:0000369!4.89e-14!4;UBERON:0002435!4.89e-14!4;UBERON:0000204!4.89e-14!4;UBERON:0010082!4.89e-14!4;UBERON:0000477!2.29e-13!286;UBERON:0000483!3.16e-13!309;UBERON:0000119!5.38e-13!312;UBERON:0000064!6.98e-13!219;UBERON:0000475!8.56e-12!365;UBERON:0001894!9.15e-12!7;UBERON:0006222!9.15e-12!7;UBERON:0001872!1.57e-11!5;UBERON:0002771!3.41e-11!3;UBERON:0005383!1.08e-10!3;UBERON:0005382!1.08e-10!3;UBERON:0000988!3.77e-10!3;UBERON:0002298!5.07e-10!8;UBERON:0003076!7.77e-10!15;UBERON:0003057!7.77e-10!15;UBERON:0001870!2.10e-08!2;UBERON:0001954!5.99e-08!2;UBERON:0003022!5.99e-08!2;UBERON:0002421!5.99e-08!2;UBERON:0002600!5.99e-08!2;UBERON:0001876!6.42e-08!2;UBERON:0000007!7.36e-08!2;UBERON:0001873!1.11e-07!2;UBERON:0010122!1.11e-07!2;UBERON:0002360!1.55e-07!2;UBERON:0000094!1.55e-07!2;UBERON:0007645!1.55e-07!2;UBERON:0000062!2.21e-07!511;UBERON:0001897!2.38e-07!2;UBERON:0001875!3.09e-07!2;UBERON:0006514!3.09e-07!2;UBERON:0000481!3.41e-07!347;UBERON:0002148!4.00e-07!2;UBERON:0009662!4.00e-07!2|ontology_enrichment_uberon_v019=UBERON:0002619;4.77e-70;22!UBERON:0001950;7.90e-67;20!UBERON:0000956;1.17e-61;25!UBERON:0000203;1.17e-61;25!UBERON:0001869;1.55e-61;32!UBERON:0001893;2.47e-56;34!UBERON:0002791;2.16e-55;32!UBERON:0003528;8.48e-52;34!UBERON:0002020;8.48e-52;34!UBERON:0000200;9.51e-44;6!UBERON:0002780;7.30e-40;41!UBERON:0001890;7.30e-40;41!UBERON:0000073;3.79e-27;53!UBERON:0002616;3.79e-27;53!UBERON:0002021;7.20e-24;5!UBERON:0000955;1.85e-23;68!UBERON:0001870;5.84e-23;3!UBERON:0001017;2.47e-20;75!UBERON:0001871;2.85e-17;6!UBERON:0002771;1.49e-15;2!UBERON:0002702;1.49e-15;2!UBERON:0001016;8.07e-15;83!UBERON:0000349;3.42e-14;5!UBERON:0007023;5.92e-10;114!UBERON:0002022;3.58e-09;1!UBERON:0003112;3.58e-09;1!UBERON:0011158;3.58e-09;1!UBERON:0003128;3.58e-09;1!UBERON:0001703;3.58e-09;1!UBERON:0002241;3.58e-09;1!UBERON:0011216;4.26e-09;132!UBERON:0002581;5.48e-09;1!UBERON:0002902;5.48e-09;1!UBERON:0001882;5.48e-09;1!UBERON:0009899;5.48e-09;1!UBERON:0007190;5.48e-09;1!UBERON:0005403;5.48e-09;1!UBERON:0000369;2.44e-08;4!UBERON:0002435;2.44e-08;4!UBERON:0000204;2.44e-08;4!UBERON:0002420;5.94e-08;9!UBERON:0007245;5.94e-08;9!UBERON:0010009;5.94e-08;9!UBERON:0010011;5.94e-08;9!UBERON:0000454;5.94e-08;9!UBERON:0001872;5.09e-07;5|ontology_enrichment_uberon_v019_2=UBERON:0002619,4.79e-70,22;UBERON:0001869,8.55e-70,32;UBERON:0001950,9.45e-67,20;UBERON:0001893,1.27e-65,34;UBERON:0002791,5.40e-62,32;UBERON:0000956,1.17e-61,25;UBERON:0000203,1.17e-61,25;UBERON:0002780,1.66e-60,41;UBERON:0001890,1.66e-60,41;UBERON:0003080,1.66e-60,41;UBERON:0006240,1.66e-60,41;UBERON:0003528,2.81e-58,34;UBERON:0002020,2.81e-58,34;UBERON:0000073,2.11e-51,53;UBERON:0002616,2.11e-51,53;UBERON:0001049,1.64e-48,56;UBERON:0005068,1.64e-48,56;UBERON:0006241,1.64e-48,56;UBERON:0007135,1.64e-48,56;UBERON:0000955,1.53e-47,68;UBERON:0006238,1.53e-47,68;UBERON:0001016,3.04e-46,89;UBERON:0000200,1.28e-43,6;UBERON:0001017,2.13e-43,81;UBERON:0003056,6.82e-40,61;UBERON:0003075,3.38e-32,82;UBERON:0007284,3.38e-32,82;UBERON:0002346,1.50e-30,86;UBERON:0007023,6.97e-28,114;UBERON:0010371,1.08e-24,104;UBER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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=55800 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=20665 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-20bp_to_HQ258123_5end | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_5_at_SCN3B_5end | |||
|id=chr11:123524532..123524556,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.31e-17;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p5@SCN3B | |||
}} |
Revision as of 16:23, 10 September 2013
Short description: | p5@SCN3B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_SCN3B_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -20bp_to_HQ258123_5end |
EntrezGene: | SCN3B |
HGNC: | 20665 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.