FFCP PHASE1:Hg19::chr11:121971257..121971264,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=399959|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA|HGNC=39522|TSSclassifier=S|UniProt=|association_with_transcript=-98bp_to_uc001pxz.1,uc001pya.3,uc001pyc.1_5end|coexpression_cluster_id=C3101|description=CAGE_peak_4_at_MIR100HG_5end|id=chr11:121971257..121971264,-|ontology_enrichment_celltype=CL:0000055!1.11e-33!180;CL:0000057!2.96e-24!75;CL:0000680!2.13e-13!57;CL:0000056!2.13e-13!57;CL:0000355!2.13e-13!57;CL:0002620!1.16e-12!23;CL:0000187!1.52e-12!54;CL:0000393!2.52e-12!60;CL:0000211!2.52e-12!60;CL:0000183!8.58e-12!59;CL:0000192!4.03e-10!42;CL:0000514!4.03e-10!42;CL:0002334!1.88e-08!12;CL:0000359!1.32e-07!32;CL:0000499!9.03e-07!27|ontology_enrichment_celltype_v019=CL:0002620;2.28e-13;23!CL:0002334;1.36e-10;12!CL:0000057;2.43e-09;73!CL:0000192;7.54e-08;43!CL:0000134;9.67e-08;55!CL:0000359;2.58e-07;32!CL:0000499;2.78e-07;28!CL:0000048;5.55e-07;58!CL:0002320;7.39e-07;188|ontology_enrichment_celltype_v019_2=CL:0000057,8.62e-26,76;CL:0002620,3.01e-13,23;CL:0000048,1.66e-12,427;CL:0000680,2.12e-12,58;CL:0000056,2.12e-12,58;CL:0000355,2.12e-12,58;CL:0000393,9.08e-12,61;CL:0000211,9.08e-12,61;CL:0000723,9.48e-12,433;CL:0000187,2.34e-11,55;CL:0000034,8.71e-11,441;CL:0002334,1.12e-10,12;CL:0000192,1.51e-09,43;CL:0000514,1.51e-09,43;CL:0000359,1.33e-07,32;CL:0000499,2.89e-07,28|ontology_enrichment_development_v019=CL:0000514;7.54e-08;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!4.78e-18!365;UBERON:0000914!9.04e-18!83;UBERON:0002329!9.04e-18!83;UBERON:0003077!9.04e-18!83;UBERON:0003059!9.04e-18!83;UBERON:0007282!9.04e-18!83;UBERON:0009618!9.04e-18!83;UBERON:0007285!9.04e-18!83;UBERON:0004290!4.65e-14!70;UBERON:0002385!6.47e-13!63;UBERON:0001015!6.47e-13!63;UBERON:0000383!6.47e-13!63;UBERON:0001134!1.11e-12!61;UBERON:0002036!1.11e-12!61;UBERON:0003082!1.11e-12!61;UBERON:0000486!7.34e-12!82;UBERON:0000481!9.13e-12!347;UBERON:0005256!8.28e-10!143;UBERON:0003102!1.98e-08!95;UBERON:0000468!4.26e-08!659;UBERON:0000119!4.48e-08!312;UBERON:0000483!7.57e-08!309;UBERON:0000033!1.07e-07!123;UBERON:0000153!1.44e-07!129;UBERON:0007811!1.44e-07!129;UBERON:0003075!1.52e-07!86;UBERON:0007284!1.52e-07!86;UBERON:0002199!6.06e-07!45;UBERON:0002416!6.06e-07!45;UBERON:0002100!6.88e-07!216;UBERON:0002346!7.85e-07!90|ontology_enrichment_uberon_v019=UBERON:0002384;4.31e-07;198|ontology_enrichment_uberon_v019_2=UBERON:0007524,5.43e-12,73;UBERON:0002329,7.27e-12,71;UBERON:0003059,7.27e-12,71;UBERON:0007282,7.27e-12,71;UBERON:0004290,7.27e-12,71;UBERON:0009618,7.27e-12,71;UBERON:0002385,1.56e-11,64;UBERON:0001015,1.56e-11,64;UBERON:0000383,1.56e-11,64;UBERON:0001134,1.57e-11,62;UBERON:0002036,1.57e-11,62;UBERON:0003082,1.57e-11,62;UBERON:0003077,1.63e-11,72;UBERON:0007285,1.63e-11,72;UBERON:0000486,7.70e-10,83;UBERON:0007503,1.26e-09,78;UBERON:0002199,3.01e-08,46;UBERON:0002416,3.01e-08,46;UBERON:0003104,3.58e-08,160;UBERON:0009142,3.58e-08,160;UBERON:0005256,1.53e-07,122;UBERON:0002097,1.84e-07,41|phase1_expression=5.81370813665781,0.856402095563933,3.38290569830331,7.00513088471913,0.893922188854576,3.48935409640147,0,2.52687949370732,0,0,0,0,0,3.46545788288131,1.98838425436749,0,3.01347264011988,1.46062018077475,0.975865597581014,0.61560529038394,0.612002073732759,1.25381888591235,1.43117993565528,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,2.30152611318355,4.3372698286148,4.51204119572301,4.05570253090306,2.3858578411533,2.91980922181582,1.22895262313288,1.77383517970051,1.66886092816939,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0.366403487860815,0,0,0.436094052142534,5.4666914686485,2.5326102332916,5.69359477496841,5.16305917347865,1.41867352879343,2.80338800071154,0,1.2333377420858,4.66816553099649,0.269421344139376,0.163461903113459,1.81628913173918,0,2.10889288650417,1.5608003841516,0.570471821544449,2.24173020827702,0.704606991862589,1.13311061057692,0.98315564691574,0.408308342509787,2.08818339430006,0.413303124703062,20.1960485737949,17.5559519787775,0,0.718618141816238,2.69337782326506,1.50142223846357,1.93944880838928,6.58466431321257,10.7270728529657,14.2726155961267,0.567160915800105,3.04962380671065,6.40672166455702,12.2920502672546,7.20218630602566,9.48083268993638,4.89517026086695,3.16398655763703,8.94514560878711,7.4052123922511,12.1168211637175,13.531335100418,8.72888706821584,2.84007674013291,5.33986120606493,6.95198428472999,0,0,0.573609190778008,0,0,0,0,0,0,1.56449532329816,3.21620469096443,0,1.85747171212792,0.721879481669586,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.6462960453256,5.88034845542168,0,0,0,0,0,0.686271241194102,0,0,0,0.925884451585296,0.32580830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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=399959 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=39522 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=-98bp_to_uc001pxz.1,uc001pya.3,uc001pyc.1_5end | |||
|coexpression_cluster_id=C3101 | |||
|description=CAGE_peak_4_at_MIR100HG_5end | |||
|id=chr11:121971257..121971264,- | |||
|ontology_enrichment_celltype=CL:0000055!1.11e-33!180;CL:0000057!2.96e-24!75;CL:0000680!2.13e-13!57;CL:0000056!2.13e-13!57;CL:0000355!2.13e-13!57;CL:0002620!1.16e-12!23;CL:0000187!1.52e-12!54;CL:0000393!2.52e-12!60;CL:0000211!2.52e-12!60;CL:0000183!8.58e-12!59;CL:0000192!4.03e-10!42;CL:0000514!4.03e-10!42;CL:0002334!1.88e-08!12;CL:0000359!1.32e-07!32;CL:0000499!9.03e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002620;2.28e-13;23!CL:0002334;1.36e-10;12!CL:0000057;2.43e-09;73!CL:0000192;7.54e-08;43!CL:0000134;9.67e-08;55!CL:0000359;2.58e-07;32!CL:0000499;2.78e-07;28!CL:0000048;5.55e-07;58!CL:0002320;7.39e-07;188 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,8.62e-26,76;CL:0002620,3.01e-13,23;CL:0000048,1.66e-12,427;CL:0000680,2.12e-12,58;CL:0000056,2.12e-12,58;CL:0000355,2.12e-12,58;CL:0000393,9.08e-12,61;CL:0000211,9.08e-12,61;CL:0000723,9.48e-12,433;CL:0000187,2.34e-11,55;CL:0000034,8.71e-11,441;CL:0002334,1.12e-10,12;CL:0000192,1.51e-09,43;CL:0000514,1.51e-09,43;CL:0000359,1.33e-07,32;CL:0000499,2.89e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;7.54e-08;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.78e-18!365;UBERON:0000914!9.04e-18!83;UBERON:0002329!9.04e-18!83;UBERON:0003077!9.04e-18!83;UBERON:0003059!9.04e-18!83;UBERON:0007282!9.04e-18!83;UBERON:0009618!9.04e-18!83;UBERON:0007285!9.04e-18!83;UBERON:0004290!4.65e-14!70;UBERON:0002385!6.47e-13!63;UBERON:0001015!6.47e-13!63;UBERON:0000383!6.47e-13!63;UBERON:0001134!1.11e-12!61;UBERON:0002036!1.11e-12!61;UBERON:0003082!1.11e-12!61;UBERON:0000486!7.34e-12!82;UBERON:0000481!9.13e-12!347;UBERON:0005256!8.28e-10!143;UBERON:0003102!1.98e-08!95;UBERON:0000468!4.26e-08!659;UBERON:0000119!4.48e-08!312;UBERON:0000483!7.57e-08!309;UBERON:0000033!1.07e-07!123;UBERON:0000153!1.44e-07!129;UBERON:0007811!1.44e-07!129;UBERON:0003075!1.52e-07!86;UBERON:0007284!1.52e-07!86;UBERON:0002199!6.06e-07!45;UBERON:0002416!6.06e-07!45;UBERON:0002100!6.88e-07!216;UBERON:0002346!7.85e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;4.31e-07;198 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,5.43e-12,73;UBERON:0002329,7.27e-12,71;UBERON:0003059,7.27e-12,71;UBERON:0007282,7.27e-12,71;UBERON:0004290,7.27e-12,71;UBERON:0009618,7.27e-12,71;UBERON:0002385,1.56e-11,64;UBERON:0001015,1.56e-11,64;UBERON:0000383,1.56e-11,64;UBERON:0001134,1.57e-11,62;UBERON:0002036,1.57e-11,62;UBERON:0003082,1.57e-11,62;UBERON:0003077,1.63e-11,72;UBERON:0007285,1.63e-11,72;UBERON:0000486,7.70e-10,83;UBERON:0007503,1.26e-09,78;UBERON:0002199,3.01e-08,46;UBERON:0002416,3.01e-08,46;UBERON:0003104,3.58e-08,160;UBERON:0009142,3.58e-08,160;UBERON:0005256,1.53e-07,122;UBERON:0002097,1.84e-07,41 | |||
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| |||
|short_description=p4@MIR100HG | |||
}} |
Revision as of 16:16, 10 September 2013
Short description: | p4@MIR100HG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_MIR100HG_5end |
Coexpression cluster: | C3101_Fibroblast_Adipocyte_tenocyte_Pancreatic_Smooth_extraskeletal_mesenchymal |
Association with transcript: | -98bp_to_uc001pxz.1, uc001pya.3, uc001pyc.1_5end |
EntrezGene: | MIR100HG |
HGNC: | 39522 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 8.62e-26 | 76 |
skin fibroblast | 3.01e-13 | 23 |
multi fate stem cell | 1.66e-12 | 427 |
muscle precursor cell | 2.12e-12 | 58 |
myoblast | 2.12e-12 | 58 |
multi-potent skeletal muscle stem cell | 2.12e-12 | 58 |
electrically responsive cell | 9.08e-12 | 61 |
electrically active cell | 9.08e-12 | 61 |
somatic stem cell | 9.48e-12 | 433 |
muscle cell | 2.34e-11 | 55 |
stem cell | 8.71e-11 | 441 |
preadipocyte | 1.12e-10 | 12 |
smooth muscle cell | 1.51e-09 | 43 |
smooth muscle myoblast | 1.51e-09 | 43 |
vascular associated smooth muscle cell | 1.33e-07 | 32 |
stromal cell | 2.89e-07 | 28 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 5.43e-12 | 73 |
somite | 7.27e-12 | 71 |
presomitic mesoderm | 7.27e-12 | 71 |
presumptive segmental plate | 7.27e-12 | 71 |
dermomyotome | 7.27e-12 | 71 |
trunk paraxial mesoderm | 7.27e-12 | 71 |
muscle tissue | 1.56e-11 | 64 |
musculature | 1.56e-11 | 64 |
musculature of body | 1.56e-11 | 64 |
skeletal muscle tissue | 1.57e-11 | 62 |
striated muscle tissue | 1.57e-11 | 62 |
myotome | 1.57e-11 | 62 |
paraxial mesoderm | 1.63e-11 | 72 |
presumptive paraxial mesoderm | 1.63e-11 | 72 |
multilaminar epithelium | 7.70e-10 | 83 |
epithelial vesicle | 1.26e-09 | 78 |
integument | 3.01e-08 | 46 |
integumental system | 3.01e-08 | 46 |
mesenchyme | 3.58e-08 | 160 |
entire embryonic mesenchyme | 3.58e-08 | 160 |
trunk mesenchyme | 1.53e-07 | 122 |
skin of body | 1.84e-07 | 41 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.