FFCP PHASE1:Hg19::chr11:118958646..118958653,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=3145|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=4982|TSSclassifier=S|UniProt=F5GY90|association_with_transcript=-39bp_to_ENST00000535253_5end|coexpression_cluster_id=C33|description=CAGE_peak_4_at_HMBS_5end|id=chr11:118958646..118958653,+|ontology_enrichment_celltype=CL:0000764!4.31e-09!2;CL:0000765!4.31e-09!2;CL:0000050!4.31e-09!2;CL:0000038!4.31e-09!2;CL:0000558!4.31e-09!2;CL:0000547!4.31e-09!2;CL:0000549!4.31e-09!2;CL:0000550!4.31e-09!2;CL:0000552!4.31e-09!2|ontology_enrichment_celltype_v019=CL:0000764;1.59e-18;2!CL:0000558;1.59e-18;2|ontology_enrichment_celltype_v019_2=CL:0000764,1.59e-18,2;CL:0000765,1.59e-18,2;CL:0000050,1.59e-18,2;CL:0000038,1.59e-18,2;CL:0000558,1.59e-18,2;CL:0000547,1.59e-18,2;CL:0000549,1.59e-18,2;CL:0000550,1.59e-18,2;CL:0000552,1.59e-18,2;CL:0000763,7.05e-11,108;CL:0000049,7.05e-11,108;CL:0002032,9.60e-08,161;CL:0000837,9.60e-08,161;CL:0000037,2.54e-07,168;CL:0000988,7.94e-07,177|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:1036!4.13e-23!8;DOID:1240!2.88e-18!39;DOID:8692!3.42e-15!31;DOID:2531!4.19e-13!51;DOID:0060083!4.19e-13!51|ontology_enrichment_disease_v019=DOID:1036;7.57e-51;8!DOID:8692;6.57e-30;31!DOID:1240;7.87e-22;39!DOID:2531;7.94e-14;51!DOID:0060083;7.94e-14;51!DOID:8552;8.53e-10;1|ontology_enrichment_disease_v019_2=DOID:1036,7.86e-51,8;DOID:8692,4.53e-31,31;DOID:1240,6.43e-29,39;DOID:2531,1.20e-21,51;DOID:0060083,1.20e-21,51;DOID:8552,8.17e-10,1|ontology_enrichment_uberon=UBERON:0000178!2.62e-08!15;UBERON:0000179!2.62e-08!15;UBERON:0000463!2.62e-08!15;UBERON:0003127!1.01e-07!2|ontology_enrichment_uberon_v019=UBERON:0000178;5.86e-09;15!UBERON:0000179;5.86e-09;15!UBERON:0000463;5.86e-09;15|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.32e-09,15;UBERON:0000179,6.32e-09,15;UBERON:0000463,6.32e-09,15|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58030450865046,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.1631605266991,81.8292961707939,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,2.29391162142713,0.569647187174163,0,0.411362273086194,3.8908398671563,3.24018862342869,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0.156679895773023,2.50634477090067,0,0,0,0,0,0,0,0,0,4.73290495621912,7.38524393686274,2.70455678475983,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,5.48498550270516,6.76786981851542,9.21493911293376,6.20939871810618,11.9544851616237,4.76809736941136,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873385142327441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,6.3211240976991,0,0,0,19.8760333368332,0,0,0,0,0,2.35806457649499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.940634592723046,0,0,0,0,0,0,0,5.22108892585975,0,0,0,0.0802413666891683,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0.248298857183432,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0|short_description=p4@HMBS}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=3145 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4982 | |||
|TSSclassifier=S | |||
|UniProt=F5GY90 | |||
|association_with_transcript=-39bp_to_ENST00000535253_5end | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_4_at_HMBS_5end | |||
|id=chr11:118958646..118958653,+ | |||
|ontology_enrichment_celltype=CL:0000764!4.31e-09!2;CL:0000765!4.31e-09!2;CL:0000050!4.31e-09!2;CL:0000038!4.31e-09!2;CL:0000558!4.31e-09!2;CL:0000547!4.31e-09!2;CL:0000549!4.31e-09!2;CL:0000550!4.31e-09!2;CL:0000552!4.31e-09!2 | |||
|ontology_enrichment_celltype_v019=CL:0000764;1.59e-18;2!CL:0000558;1.59e-18;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.59e-18,2;CL:0000765,1.59e-18,2;CL:0000050,1.59e-18,2;CL:0000038,1.59e-18,2;CL:0000558,1.59e-18,2;CL:0000547,1.59e-18,2;CL:0000549,1.59e-18,2;CL:0000550,1.59e-18,2;CL:0000552,1.59e-18,2;CL:0000763,7.05e-11,108;CL:0000049,7.05e-11,108;CL:0002032,9.60e-08,161;CL:0000837,9.60e-08,161;CL:0000037,2.54e-07,168;CL:0000988,7.94e-07,177 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1036!4.13e-23!8;DOID:1240!2.88e-18!39;DOID:8692!3.42e-15!31;DOID:2531!4.19e-13!51;DOID:0060083!4.19e-13!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;7.57e-51;8!DOID:8692;6.57e-30;31!DOID:1240;7.87e-22;39!DOID:2531;7.94e-14;51!DOID:0060083;7.94e-14;51!DOID:8552;8.53e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,7.86e-51,8;DOID:8692,4.53e-31,31;DOID:1240,6.43e-29,39;DOID:2531,1.20e-21,51;DOID:0060083,1.20e-21,51;DOID:8552,8.17e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000178!2.62e-08!15;UBERON:0000179!2.62e-08!15;UBERON:0000463!2.62e-08!15;UBERON:0003127!1.01e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.86e-09;15!UBERON:0000179;5.86e-09;15!UBERON:0000463;5.86e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.32e-09,15;UBERON:0000179,6.32e-09,15;UBERON:0000463,6.32e-09,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.58030450865046,0,0,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.1631605266991,81.8292961707939,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,2.29391162142713,0.569647187174163,0,0.411362273086194,3.8908398671563,3.24018862342869,0,0,0,0,0,0,0,0.318852545457645,0,0,0,0,0,0,0.156679895773023,2.50634477090067,0,0,0,0,0,0,0,0,0,4.73290495621912,7.38524393686274,2.70455678475983,0,0,0,0,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02193298195737,0,5.48498550270516,6.76786981851542,9.21493911293376,6.20939871810618,11.9544851616237,4.76809736941136,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.873385142327441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209818352539992,0,0,0,0,0,0,0,0,0,0,6.3211240976991,0,0,0,19.8760333368332,0,0,0,0,0,2.35806457649499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0.940634592723046,0,0,0,0,0,0,0,5.22108892585975,0,0,0,0.0802413666891683,0,0,0,0,0,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27940389140589,0,0,0.248298857183432,0,0,0,0,0,0,0.0717222053926763,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p4@HMBS | |||
}} |
Revision as of 16:06, 10 September 2013
Short description: | p4@HMBS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_HMBS_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -39bp_to_ENST00000535253_5end |
EntrezGene: | HMBS |
HGNC: | 4982 |
UniProt: | F5GY90 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.59e-18 | 2 |
erythroblast | 1.59e-18 | 2 |
megakaryocyte-erythroid progenitor cell | 1.59e-18 | 2 |
erythroid progenitor cell | 1.59e-18 | 2 |
reticulocyte | 1.59e-18 | 2 |
proerythroblast | 1.59e-18 | 2 |
basophilic erythroblast | 1.59e-18 | 2 |
polychromatophilic erythroblast | 1.59e-18 | 2 |
orthochromatic erythroblast | 1.59e-18 | 2 |
myeloid cell | 7.05e-11 | 108 |
common myeloid progenitor | 7.05e-11 | 108 |
hematopoietic oligopotent progenitor cell | 9.60e-08 | 161 |
hematopoietic multipotent progenitor cell | 9.60e-08 | 161 |
hematopoietic stem cell | 2.54e-07 | 168 |
hematopoietic cell | 7.94e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
blood | 6.32e-09 | 15 |
haemolymphatic fluid | 6.32e-09 | 15 |
organism substance | 6.32e-09 | 15 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 7.86e-51 | 8 |
myeloid leukemia | 4.53e-31 | 31 |
leukemia | 6.43e-29 | 39 |
hematologic cancer | 1.20e-21 | 51 |
immune system cancer | 1.20e-21 | 51 |
chronic myeloid leukemia | 8.17e-10 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.