FFCP PHASE1:Hg19::chr11:102043225..102043229,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:102043225..102043229,+|id=chr11:102043225..102043229,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=CL:0000511;1.04e-13;1!CL:0002625;1.04e-13;1!CL:0000216;1.04e-13;1!CL:0002535;1.02e-07;2|ontology_enrichment_celltype_v019_2=CL:0000511,5.85e-14,1;CL:0002625,5.85e-14,1;CL:0000216,5.85e-14,1;CL:0002535,9.25e-08,2|ontology_enrichment_development_v019=UBERON:0007297;1.27e-25;2!UBERON:0005754;1.04e-13;1|ontology_enrichment_disease=DOID:0050687!1.15e-18!143;DOID:305!1.05e-13!106;DOID:7!1.48e-08!39;DOID:14566!3.50e-08!239;DOID:162!3.76e-08!235;DOID:1749!1.07e-07!14|ontology_enrichment_disease_v019=DOID:1749;1.26e-08;14!DOID:3307;1.02e-07;2!DOID:3910;1.70e-07;2|ontology_enrichment_disease_v019_2=DOID:1749,1.24e-08,14;DOID:3307,1.05e-07,2;DOID:3910,1.75e-07,2|ontology_enrichment_uberon=UBERON:0001007!1.45e-13!155;UBERON:0001555!1.45e-13!155;UBERON:0007026!1.45e-13!155;UBERON:0004119!4.75e-13!169;UBERON:0000925!4.75e-13!169;UBERON:0006595!4.75e-13!169;UBERON:0004921!5.05e-11!129;UBERON:0004185!5.05e-11!129;UBERON:0000062!5.29e-10!511;UBERON:0000077!1.34e-08!130;UBERON:0000481!3.88e-08!347;UBERON:0000161!1.76e-07!35;UBERON:0005156!2.20e-07!59;UBERON:0000990!2.20e-07!59;UBERON:0000468!7.24e-07!659|ontology_enrichment_uberon_v019=UBERON:0005904;2.51e-28;4!UBERON:0000058;5.09e-20;10!UBERON:0006947;1.94e-17;3!UBERON:0004054;1.94e-17;3!UBERON:0000998;1.04e-13;1!UBERON:0001136;1.04e-13;1!UBERON:0001301;1.04e-13;1!UBERON:0001343;1.04e-13;1!UBERON:0006868;1.04e-13;1!UBERON:0004910;1.04e-13;1!UBERON:0004813;1.04e-13;1!UBERON:0003135;1.03e-10;11!UBERON:0003101;2.97e-09;22!UBERON:0000079;2.97e-09;22!UBERON:0006562;1.02e-07;2!UBERON:0006955;1.02e-07;2!UBERON:0004801;1.02e-07;2!UBERON:0004903;1.70e-07;2!UBERON:0004909;1.70e-07;2!UBERON:0002173;1.70e-07;2!UBERON:0002186;1.70e-07;2!UBERON:0000473;4.15e-07;8|ontology_enrichment_uberon_v019_2=UBERON:0005904,1.36e-28,4;UBERON:0006947,1.64e-17,3;UBERON:0004054,1.64e-17,3;UBERON:0000998,5.15e-14,1;UBERON:0006868,5.15e-14,1;UBERON:0001136,5.85e-14,1;UBERON:0001343,5.85e-14,1;UBERON:0004910,5.85e-14,1;UBERON:0005154,5.85e-14,1;UBERON:0005295,5.85e-14,1;UBERON:0004813,5.85e-14,1;UBERON:0005297,5.85e-14,1;UBERON:0005294,5.85e-14,1;UBERON:0010141,5.85e-14,1;UBERON:0005891,5.85e-14,1;UBERON:0001301,1.61e-13,1;UBERON:0003135,8.26e-11,11;UBERON:0004876,8.26e-11,11;UBERON:0000058,9.61e-11,19;UBERON:0003101,2.55e-09,22;UBERON:0000079,2.55e-09,22;UBERON:0006955,9.25e-08,2;UBERON:0004801,9.25e-08,2;UBERON:0004909,1.28e-07,2;UBERON:0004903,1.75e-07,2;UBERON:0002173,1.75e-07,2;UBERON:0002186,1.75e-07,2;UBERON:0003064,2.30e-07,28;UBERON:0000473,3.05e-07,8|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0.313454721478088,0.85870796139317,0.136874425072884,0.376627918784408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.144846518960824,0,0,0.472674085820339,0.665188192387692,0.43917392846563,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0,0.622422070799533,0,0,0.151357427644931,0,0.234321431833797,0,0,0,0,0,0.561803226808994,0.204154171254893,0.491337269247072,0.103325781175765,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0.612975591598039,0.300476117813194,0,0.89694817844431,0.213557388818567,0.211931901159562,0.300091096084402,0.206105058476878,0.257640540045629,0.18611685633159,1.0126579934476,0.0974370051611986,0.252433774244115,0.276149695926898,0.161646056818812,0,0.201504196455281,0,0,0.272746120590835,0,0,0.132529768321485,0,0,0,0.36497735907583,0,0,0,0,0,0.473227200159376,0.168584690078102,0.482022059766964,0.110293972732394,0,0.474541238222193,0.269662616320329,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.368965315629341,0,0.109750285408626,0,0.100528972411631,0.185176890317059,0,0,0,0.231860809950154,0.117408694235822,0.288732895522148,0,0.190254152234598,0,0,0,0,0,0,0.16798212819886,0,0.268675568108545,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0.285826432630578,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0.823240336780769,0,0,0,0.602878754119172,0,0.199945982364114,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0,1.03985430765404,0.356857977594324,0,0,0,0,0,0,0.184369168541703,0.260650843404249,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0.128139149255701,0,0,0,0.154209693802656,0,0.164254312027618,0,0,1.20859449591622,0.200506470303285,0.368323955743585,0.1148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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:102043225..102043229,+ | |||
|id=chr11:102043225..102043229,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000511;1.04e-13;1!CL:0002625;1.04e-13;1!CL:0000216;1.04e-13;1!CL:0002535;1.02e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,5.85e-14,1;CL:0002625,5.85e-14,1;CL:0000216,5.85e-14,1;CL:0002535,9.25e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.27e-25;2!UBERON:0005754;1.04e-13;1 | |||
|ontology_enrichment_disease=DOID:0050687!1.15e-18!143;DOID:305!1.05e-13!106;DOID:7!1.48e-08!39;DOID:14566!3.50e-08!239;DOID:162!3.76e-08!235;DOID:1749!1.07e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.26e-08;14!DOID:3307;1.02e-07;2!DOID:3910;1.70e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.24e-08,14;DOID:3307,1.05e-07,2;DOID:3910,1.75e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001007!1.45e-13!155;UBERON:0001555!1.45e-13!155;UBERON:0007026!1.45e-13!155;UBERON:0004119!4.75e-13!169;UBERON:0000925!4.75e-13!169;UBERON:0006595!4.75e-13!169;UBERON:0004921!5.05e-11!129;UBERON:0004185!5.05e-11!129;UBERON:0000062!5.29e-10!511;UBERON:0000077!1.34e-08!130;UBERON:0000481!3.88e-08!347;UBERON:0000161!1.76e-07!35;UBERON:0005156!2.20e-07!59;UBERON:0000990!2.20e-07!59;UBERON:0000468!7.24e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0005904;2.51e-28;4!UBERON:0000058;5.09e-20;10!UBERON:0006947;1.94e-17;3!UBERON:0004054;1.94e-17;3!UBERON:0000998;1.04e-13;1!UBERON:0001136;1.04e-13;1!UBERON:0001301;1.04e-13;1!UBERON:0001343;1.04e-13;1!UBERON:0006868;1.04e-13;1!UBERON:0004910;1.04e-13;1!UBERON:0004813;1.04e-13;1!UBERON:0003135;1.03e-10;11!UBERON:0003101;2.97e-09;22!UBERON:0000079;2.97e-09;22!UBERON:0006562;1.02e-07;2!UBERON:0006955;1.02e-07;2!UBERON:0004801;1.02e-07;2!UBERON:0004903;1.70e-07;2!UBERON:0004909;1.70e-07;2!UBERON:0002173;1.70e-07;2!UBERON:0002186;1.70e-07;2!UBERON:0000473;4.15e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005904,1.36e-28,4;UBERON:0006947,1.64e-17,3;UBERON:0004054,1.64e-17,3;UBERON:0000998,5.15e-14,1;UBERON:0006868,5.15e-14,1;UBERON:0001136,5.85e-14,1;UBERON:0001343,5.85e-14,1;UBERON:0004910,5.85e-14,1;UBERON:0005154,5.85e-14,1;UBERON:0005295,5.85e-14,1;UBERON:0004813,5.85e-14,1;UBERON:0005297,5.85e-14,1;UBERON:0005294,5.85e-14,1;UBERON:0010141,5.85e-14,1;UBERON:0005891,5.85e-14,1;UBERON:0001301,1.61e-13,1;UBERON:0003135,8.26e-11,11;UBERON:0004876,8.26e-11,11;UBERON:0000058,9.61e-11,19;UBERON:0003101,2.55e-09,22;UBERON:0000079,2.55e-09,22;UBERON:0006955,9.25e-08,2;UBERON:0004801,9.25e-08,2;UBERON:0004909,1.28e-07,2;UBERON:0004903,1.75e-07,2;UBERON:0002173,1.75e-07,2;UBERON:0002186,1.75e-07,2;UBERON:0003064,2.30e-07,28;UBERON:0000473,3.05e-07,8 | |||
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| |||
|short_description=p@chr11:102043225..102043229,+ | |||
}} |
Revision as of 15:19, 10 September 2013
Short description: | p@chr11:102043225..102043229, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:102043225..102043229, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 5.85e-14 | 1 |
seminiferous tubule epithelial cell | 5.85e-14 | 1 |
Sertoli cell | 5.85e-14 | 1 |
epithelial cell of cervix | 9.25e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
duct of male reproductive system | 1.36e-28 | 4 |
male genital duct | 1.64e-17 | 3 |
internal male genitalia | 1.64e-17 | 3 |
seminal vesicle | 5.15e-14 | 1 |
seminal fluid secreting gland | 5.15e-14 | 1 |
mesothelium | 5.85e-14 | 1 |
seminiferous tubule of testis | 5.85e-14 | 1 |
epithelium of male gonad | 5.85e-14 | 1 |
epithelial cord | 5.85e-14 | 1 |
sex cord | 5.85e-14 | 1 |
seminiferous tubule epithelium | 5.85e-14 | 1 |
testis sex cord | 5.85e-14 | 1 |
genital ridge | 5.85e-14 | 1 |
primitive sex cord of indifferent gonad | 5.85e-14 | 1 |
coelomic epithelium | 5.85e-14 | 1 |
epididymis | 1.61e-13 | 1 |
male reproductive organ | 8.26e-11 | 11 |
urogenital ridge | 8.26e-11 | 11 |
duct | 9.61e-11 | 19 |
male organism | 2.55e-09 | 22 |
male reproductive system | 2.55e-09 | 22 |
uterine epithelium | 9.25e-08 | 2 |
cervix epithelium | 9.25e-08 | 2 |
epithelium of gonad | 1.28e-07 | 2 |
bronchoalveolar duct junction | 1.75e-07 | 2 |
alveolar duct | 1.75e-07 | 2 |
bronchiole | 1.75e-07 | 2 |
intermediate mesoderm | 2.30e-07 | 28 |
testis | 3.05e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.24e-08 | 14 |
teratoma | 1.05e-07 | 2 |
lung adenocarcinoma | 1.75e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.