FFCP PHASE1:Hg19::chr11:68780667..68780695,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=116535|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24828|TSSclassifier=S|UniProt=F5H5R4,E9PDW9|association_with_transcript=18bp_to_ENST00000320913,ENST00000421543_5end|description=CAGE_peak_2_at_MRGPRF_5end|id=chr11:68780667..68780695,-|ontology_enrichment_celltype=CL:0000055!3.35e-29!180;CL:0000057!2.02e-19!75;CL:0000183!4.37e-13!59;CL:0000680!4.85e-13!57;CL:0000056!4.85e-13!57;CL:0000355!4.85e-13!57;CL:0000187!1.02e-12!54;CL:0000393!2.23e-12!60;CL:0000211!2.23e-12!60;CL:0000192!7.00e-12!42;CL:0000514!7.00e-12!42;CL:0002620!5.84e-10!23;CL:0000136!6.76e-07!15;CL:0000359!7.29e-07!32|ontology_enrichment_celltype_v019=CL:0002620;1.83e-11;23!CL:0000057;3.46e-08;73!CL:0000192;1.34e-07;43|ontology_enrichment_celltype_v019_2=CL:0000057,1.19e-19,76;CL:0002620,1.73e-11,23;CL:0000680,1.09e-10,58;CL:0000056,1.09e-10,58;CL:0000355,1.09e-10,58;CL:0000187,2.86e-10,55;CL:0000192,3.49e-10,43;CL:0000514,3.49e-10,43;CL:0000393,1.52e-08,61;CL:0000211,1.52e-08,61;CL:0000136,4.46e-07,15|ontology_enrichment_development_v019=CL:0000514;1.34e-07;43|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000914!7.16e-19!83;UBERON:0002329!7.16e-19!83;UBERON:0003077!7.16e-19!83;UBERON:0003059!7.16e-19!83;UBERON:0007282!7.16e-19!83;UBERON:0009618!7.16e-19!83;UBERON:0007285!7.16e-19!83;UBERON:0004290!2.18e-16!70;UBERON:0002385!4.06e-14!63;UBERON:0001015!4.06e-14!63;UBERON:0000383!4.06e-14!63;UBERON:0001134!4.52e-13!61;UBERON:0002036!4.52e-13!61;UBERON:0003082!4.52e-13!61;UBERON:0000486!5.42e-13!82;UBERON:0005256!1.25e-12!143;UBERON:0000475!1.56e-11!365;UBERON:0000481!1.67e-10!347;UBERON:0003102!2.59e-09!95;UBERON:0002100!9.36e-09!216;UBERON:0007023!3.21e-08!115;UBERON:0000468!1.61e-07!659;UBERON:0003104!2.94e-07!238;UBERON:0009142!2.94e-07!238;UBERON:0002199!3.15e-07!45;UBERON:0002416!3.15e-07!45|ontology_enrichment_uberon_v019=UBERON:0002385;1.48e-07;31!UBERON:0001015;1.48e-07;31!UBERON:0000383;1.48e-07;31!UBERON:0002384;2.25e-07;198!UBERON:0001013;8.61e-07;14|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.26e-15,73;UBERON:0003077,1.20e-14,72;UBERON:0007285,1.20e-14,72;UBERON:0002329,1.64e-14,71;UBERON:0003059,1.64e-14,71;UBERON:0007282,1.64e-14,71;UBERON:0004290,1.64e-14,71;UBERON:0009618,1.64e-14,71;UBERON:0003104,8.72e-13,160;UBERON:0009142,8.72e-13,160;UBERON:0002385,4.96e-12,64;UBERON:0001015,4.96e-12,64;UBERON:0000383,4.96e-12,64;UBERON:0003102,5.12e-12,99;UBERON:0000486,8.99e-12,83;UBERON:0007503,1.10e-11,78;UBERON:0005256,3.36e-11,122;UBERON:0001134,6.10e-11,62;UBERON:0002036,6.10e-11,62;UBERON:0003082,6.10e-11,62;UBERON:0002199,7.94e-10,46;UBERON:0002416,7.94e-10,46;UBERON:0002097,2.73e-08,41;UBERON:0002100,7.86e-07,199;UBERON:0001013,9.12e-07,14|phase1_expression=0.908391896352783,1.92690471501885,3.38290569830331,5.00366491765652,3.5756887554183,11.3404008133048,2.53299878168311,1.26343974685366,8.09675447419499,0.245733936501509,0,0,0,9.53000917792359,15.2442792834841,1.34465029290355,3.01347264011988,2.19093027116212,2.43966399395253,4.43235809076436,2.85600967741954,10.9709152517331,1.14494394852423,1.50561867580173,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,8.31310050484502,16.5441510509844,13.6155727823174,0.795285947051099,6.32625331393427,1.41802225746102,0.443458794925128,0.263504357079378,8.90657713384446,0,0,0,0,0.132957960518865,0,0,0,0,1.72046919021225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.77282716330412,0.794455084879313,6.02356903572509,5.67469411517371,2.24271040056923,0,0,0.622422070799533,0,0.163461903113459,3.78393569112329,2.88087962239999,1.40592859100278,7.80400192075801,1.1409436430889,4.93180645820944,1.17434498643765,2.91371299862637,2.10676210053373,5.30800845262722,4.54486974053541,8.47271405641277,19.0080457165129,18.7922866251703,0.910161361938026,2.87447256726495,2.86171393721913,1.7516592782075,3.04770527032601,8.77955241761676,8.27517048657353,13.8219014194069,0.113432183160021,3.22901344239952,6.62027905337559,4.87443372666992,6.00182192168805,5.15262646192194,3.09168648054755,4.46680455195816,4.05063197379039,2.92311015483596,1.7670364197088,9.38908966151453,6.30419621593366,7.10019185033229,3.32481924151213,8.98671139245584,0,0,0,1.09776335516636,0.927708378250397,0.813357600086629,1.24393266018445,0.756962552626885,0.36497735907583,12.5159625863853,59.1781663137454,8.28809528114883,2.3218396401599,7.94067429836544,0,0,0,0,0,0,0,0,0,0,0,1.6462960453256,4.41026134156626,1.26755034821831,0,0.590789906681404,0,0,0.171567810298526,0,0,0,0,0.651616610620649,1.03993478527958,0,1.507095264676,0.234817388471643,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0.432359860250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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=116535 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24828 | |||
|TSSclassifier=S | |||
|UniProt=F5H5R4,E9PDW9 | |||
|association_with_transcript=18bp_to_ENST00000320913,ENST00000421543_5end | |||
|description=CAGE_peak_2_at_MRGPRF_5end | |||
|id=chr11:68780667..68780695,- | |||
|ontology_enrichment_celltype=CL:0000055!3.35e-29!180;CL:0000057!2.02e-19!75;CL:0000183!4.37e-13!59;CL:0000680!4.85e-13!57;CL:0000056!4.85e-13!57;CL:0000355!4.85e-13!57;CL:0000187!1.02e-12!54;CL:0000393!2.23e-12!60;CL:0000211!2.23e-12!60;CL:0000192!7.00e-12!42;CL:0000514!7.00e-12!42;CL:0002620!5.84e-10!23;CL:0000136!6.76e-07!15;CL:0000359!7.29e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.83e-11;23!CL:0000057;3.46e-08;73!CL:0000192;1.34e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.19e-19,76;CL:0002620,1.73e-11,23;CL:0000680,1.09e-10,58;CL:0000056,1.09e-10,58;CL:0000355,1.09e-10,58;CL:0000187,2.86e-10,55;CL:0000192,3.49e-10,43;CL:0000514,3.49e-10,43;CL:0000393,1.52e-08,61;CL:0000211,1.52e-08,61;CL:0000136,4.46e-07,15 | |||
|ontology_enrichment_development_v019=CL:0000514;1.34e-07;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!7.16e-19!83;UBERON:0002329!7.16e-19!83;UBERON:0003077!7.16e-19!83;UBERON:0003059!7.16e-19!83;UBERON:0007282!7.16e-19!83;UBERON:0009618!7.16e-19!83;UBERON:0007285!7.16e-19!83;UBERON:0004290!2.18e-16!70;UBERON:0002385!4.06e-14!63;UBERON:0001015!4.06e-14!63;UBERON:0000383!4.06e-14!63;UBERON:0001134!4.52e-13!61;UBERON:0002036!4.52e-13!61;UBERON:0003082!4.52e-13!61;UBERON:0000486!5.42e-13!82;UBERON:0005256!1.25e-12!143;UBERON:0000475!1.56e-11!365;UBERON:0000481!1.67e-10!347;UBERON:0003102!2.59e-09!95;UBERON:0002100!9.36e-09!216;UBERON:0007023!3.21e-08!115;UBERON:0000468!1.61e-07!659;UBERON:0003104!2.94e-07!238;UBERON:0009142!2.94e-07!238;UBERON:0002199!3.15e-07!45;UBERON:0002416!3.15e-07!45 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.48e-07;31!UBERON:0001015;1.48e-07;31!UBERON:0000383;1.48e-07;31!UBERON:0002384;2.25e-07;198!UBERON:0001013;8.61e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,3.26e-15,73;UBERON:0003077,1.20e-14,72;UBERON:0007285,1.20e-14,72;UBERON:0002329,1.64e-14,71;UBERON:0003059,1.64e-14,71;UBERON:0007282,1.64e-14,71;UBERON:0004290,1.64e-14,71;UBERON:0009618,1.64e-14,71;UBERON:0003104,8.72e-13,160;UBERON:0009142,8.72e-13,160;UBERON:0002385,4.96e-12,64;UBERON:0001015,4.96e-12,64;UBERON:0000383,4.96e-12,64;UBERON:0003102,5.12e-12,99;UBERON:0000486,8.99e-12,83;UBERON:0007503,1.10e-11,78;UBERON:0005256,3.36e-11,122;UBERON:0001134,6.10e-11,62;UBERON:0002036,6.10e-11,62;UBERON:0003082,6.10e-11,62;UBERON:0002199,7.94e-10,46;UBERON:0002416,7.94e-10,46;UBERON:0002097,2.73e-08,41;UBERON:0002100,7.86e-07,199;UBERON:0001013,9.12e-07,14 | |||
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| |||
|short_description=p2@MRGPRF | |||
}} |
Revision as of 19:21, 10 September 2013
Short description: | p2@MRGPRF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_MRGPRF_5end |
Coexpression cluster: | NA |
Association with transcript: | 18bp_to_ENST00000320913, ENST00000421543_5end |
EntrezGene: | MRGPRF |
HGNC: | 24828 |
UniProt: | F5H5R4E9PDW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.19e-19 | 76 |
skin fibroblast | 1.73e-11 | 23 |
muscle precursor cell | 1.09e-10 | 58 |
myoblast | 1.09e-10 | 58 |
multi-potent skeletal muscle stem cell | 1.09e-10 | 58 |
muscle cell | 2.86e-10 | 55 |
smooth muscle cell | 3.49e-10 | 43 |
smooth muscle myoblast | 3.49e-10 | 43 |
electrically responsive cell | 1.52e-08 | 61 |
electrically active cell | 1.52e-08 | 61 |
fat cell | 4.46e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 3.26e-15 | 73 |
paraxial mesoderm | 1.20e-14 | 72 |
presumptive paraxial mesoderm | 1.20e-14 | 72 |
somite | 1.64e-14 | 71 |
presomitic mesoderm | 1.64e-14 | 71 |
presumptive segmental plate | 1.64e-14 | 71 |
dermomyotome | 1.64e-14 | 71 |
trunk paraxial mesoderm | 1.64e-14 | 71 |
mesenchyme | 8.72e-13 | 160 |
entire embryonic mesenchyme | 8.72e-13 | 160 |
muscle tissue | 4.96e-12 | 64 |
musculature | 4.96e-12 | 64 |
musculature of body | 4.96e-12 | 64 |
surface structure | 5.12e-12 | 99 |
multilaminar epithelium | 8.99e-12 | 83 |
epithelial vesicle | 1.10e-11 | 78 |
trunk mesenchyme | 3.36e-11 | 122 |
skeletal muscle tissue | 6.10e-11 | 62 |
striated muscle tissue | 6.10e-11 | 62 |
myotome | 6.10e-11 | 62 |
integument | 7.94e-10 | 46 |
integumental system | 7.94e-10 | 46 |
skin of body | 2.73e-08 | 41 |
trunk | 7.86e-07 | 199 |
adipose tissue | 9.12e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.