FFCP PHASE1:Hg19::chr11:68609416..68609427,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1374|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2328|TSSclassifier=S|UniProt=P50416,B2RAQ8,Q8WZ48|association_with_transcript=-17bp_to_ENST00000265641,ENST00000376618,NM_001031847,NM_001876,uc001oof.3,uc001oog.3_5end|description=CAGE_peak_3_at_CPT1A_5end|id=chr11:68609416..68609427,-|ontology_enrichment_celltype=CL:0002139!1.77e-09!24;CL:0000071!1.40e-07!18;CL:0002546!1.40e-07!18;CL:0000115!2.89e-07!35|ontology_enrichment_celltype_v019=CL:0002139;1.01e-10;24!CL:0000115;4.44e-09;36!CL:1000413;9.19e-09;9!CL:0002078;8.93e-08;45!CL:0000071;1.02e-07;18|ontology_enrichment_celltype_v019_2=CL:0002139,8.69e-11,24;CL:0000115,1.12e-10,36;CL:0002078,9.15e-10,45;CL:1000413,1.15e-08,9;CL:0000071,7.91e-08,18;CL:0002546,7.91e-08,18|ontology_enrichment_development_v019=CL:0002546;1.02e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!8.91e-08!194;UBERON:0000055!9.50e-08!69;UBERON:0004872!1.30e-07!84;UBERON:0001986!1.40e-07!18;UBERON:0004638!1.40e-07!18;UBERON:0004852!1.40e-07!18;UBERON:0004111!3.55e-07!241;UBERON:0001981!5.25e-07!60;UBERON:0007500!5.25e-07!60;UBERON:0004537!5.25e-07!60;UBERON:0006965!5.25e-07!60|ontology_enrichment_uberon_v019=UBERON:0003915;9.19e-09;9!UBERON:0004700;9.19e-09;9!UBERON:0001917;9.19e-09;9!UBERON:0004638;1.02e-07;18!UBERON:0001986;1.02e-07;18!UBERON:0004852;1.02e-07;18|ontology_enrichment_uberon_v019_2=UBERON:0003915,1.15e-08,9;UBERON:0004700,1.15e-08,9;UBERON:0001917,1.15e-08,9;UBERON:0004638,7.91e-08,18;UBERON:0001986,7.91e-08,18;UBERON:0004852,7.91e-08,18;UBERON:0000055,3.40e-07,68;UBERON:0001009,3.68e-07,112|phase1_expression=0.363356758541113,0.856402095563933,0.704772020479856,0,0,0,0,0.631719873426831,0.261185628199839,0.245733936501509,0.697801167972428,0.436882744260345,0,0.37129905888014,0.994192127183747,0.672325146451775,0,0.730310090387373,0,0.61560529038394,0.612002073732759,0.940364164434263,2.0036519099174,0.547497700291537,1.25542639594803,0.229240217243854,0.164201178899891,0.393553906568396,0.393364276848904,0.383829398097213,0.464448369948228,0.919421224478927,0.6024118375565,0.739508020333575,0,0,0.880801318004542,0,0,0.217010870715852,0,0.647787332037959,0,0.581592955118259,0.377875943688809,0,0.232429036905685,0.411167888021826,0,1.1507695692886,0.512321413058201,0,0.344745680736619,0.645484683583826,0,0.564727018627814,0.272906150057846,0.898893937780338,0.306083892370903,0,0,0.659702600373432,0.598390972864896,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.217188844705117,0,0,0,0.422510572623884,0.425208599930087,0.209658645508376,0.44931452458598,0.600707571366025,0,0,0.19891667719909,0.182664153764634,1.75996244461323,0.546138611262131,0,0,0,0.574752439954483,0,0.954053754535364,0.569212969109448,0,0,2.64342657158052,0,0.263384084775077,0,0,0.411202997999018,0,0,0,0,0.222820913770347,0.294605907474837,0.443067789167242,0,1.5370958367081,0.780356085359269,0.986627427622057,0.552700035571697,0.579606171470105,0,0,0,0.226618685395132,0,0,0.506039384039006,0.318565414324097,0,0,0.451725357233318,0.127986611154418,0,0.236777252044017,0,0,1.06976078313403,0,0,0,0.383587685530591,0,2.50668955317945,1.01392563272577,0,0,0.189069634328136,0,0.087834785693126,0.982343066232845,0,1.11235332835329,0.324547393654683,1.39303789839414,0.26591592103773,0.476981248610684,0,0.371457501329565,0.79504962946682,2.58070378531837,0.694281003215189,2.82653970962005,1.25849830862972,1.37559020970034,1.25396979922086,2.06733407335463,1.77883131343355,0.66944122552934,1.61131726843659,1.52054421143703,3.41686880567437,1.10298924103761,4.0507097394088,0.714397826272638,0.898117490504679,0.900891843866578,0,0.949265659568129,0.732806975721629,0,0,0,0.496971951695318,0.759783069987479,1.58891016975863,2.29469296599051,1.41867352879343,0.560677600142307,1.06748995729705,0.49333509683432,1.55605517699883,0.538842688278752,0.653847612453835,1.21085942115945,0.576175924479999,0.234321431833797,0.312160076830321,0,0.597794722207204,0.117434498643765,0.323745888736263,0.140450806702248,0.408308342509787,0.122834317311768,1.03325781175765,1.18800285728205,0.494533858557114,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0.877955241761676,1.22595118319608,1.20190447125277,0.794025282120147,1.61450672119976,0.213557388818567,0.847727604638247,1.20036438433761,0.309157587715317,0.515281080091258,0,1.35021065793013,0.974370051611986,1.00973509697646,0.368199594569197,0.484938170456436,0.710019185033229,0.604512589365842,0.508681776931463,0,0.272746120590835,0,0.975789649036763,0,0.232387885739037,0.518305275076852,0,0,0,0,0,0.464367928031979,0.721879481669586,0.473227200159376,0.168584690078102,0.241011029883482,0.330881918197182,0,0.474541238222193,0.134831308160164,0.196221465125346,0.38474715694639,1.4763109092493,1.40241773803446,0,1.47008711385542,0,0.982827216677626,1.77236972004421,0.441463099414651,0,0,0.10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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1374 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2328 | |||
|TSSclassifier=S | |||
|UniProt=P50416,B2RAQ8,Q8WZ48 | |||
|association_with_transcript=-17bp_to_ENST00000265641,ENST00000376618,NM_001031847,NM_001876,uc001oof.3,uc001oog.3_5end | |||
|description=CAGE_peak_3_at_CPT1A_5end | |||
|id=chr11:68609416..68609427,- | |||
|ontology_enrichment_celltype=CL:0002139!1.77e-09!24;CL:0000071!1.40e-07!18;CL:0002546!1.40e-07!18;CL:0000115!2.89e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0002139;1.01e-10;24!CL:0000115;4.44e-09;36!CL:1000413;9.19e-09;9!CL:0002078;8.93e-08;45!CL:0000071;1.02e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,8.69e-11,24;CL:0000115,1.12e-10,36;CL:0002078,9.15e-10,45;CL:1000413,1.15e-08,9;CL:0000071,7.91e-08,18;CL:0002546,7.91e-08,18 | |||
|ontology_enrichment_development_v019=CL:0002546;1.02e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!8.91e-08!194;UBERON:0000055!9.50e-08!69;UBERON:0004872!1.30e-07!84;UBERON:0001986!1.40e-07!18;UBERON:0004638!1.40e-07!18;UBERON:0004852!1.40e-07!18;UBERON:0004111!3.55e-07!241;UBERON:0001981!5.25e-07!60;UBERON:0007500!5.25e-07!60;UBERON:0004537!5.25e-07!60;UBERON:0006965!5.25e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;9.19e-09;9!UBERON:0004700;9.19e-09;9!UBERON:0001917;9.19e-09;9!UBERON:0004638;1.02e-07;18!UBERON:0001986;1.02e-07;18!UBERON:0004852;1.02e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,1.15e-08,9;UBERON:0004700,1.15e-08,9;UBERON:0001917,1.15e-08,9;UBERON:0004638,7.91e-08,18;UBERON:0001986,7.91e-08,18;UBERON:0004852,7.91e-08,18;UBERON:0000055,3.40e-07,68;UBERON:0001009,3.68e-07,112 | |||
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| |||
|short_description=p3@CPT1A | |||
}} |
Revision as of 19:21, 10 September 2013
Short description: | p3@CPT1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_CPT1A_5end |
Coexpression cluster: | NA |
Association with transcript: | -17bp_to_ENST00000265641, ENST00000376618, NM_001031847, NM_001876, uc001oof.3, uc001oog.3_5end |
EntrezGene: | CPT1A |
HGNC: | 2328 |
UniProt: | P50416B2RAQ8Q8WZ48 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 8.69e-11 | 24 |
endothelial cell | 1.12e-10 | 36 |
meso-epithelial cell | 9.15e-10 | 45 |
endothelial cell of artery | 1.15e-08 | 9 |
blood vessel endothelial cell | 7.91e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.91e-08 | 18 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 1.15e-08 | 9 |
arterial system endothelium | 1.15e-08 | 9 |
endothelium of artery | 1.15e-08 | 9 |
blood vessel endothelium | 7.91e-08 | 18 |
endothelium | 7.91e-08 | 18 |
cardiovascular system endothelium | 7.91e-08 | 18 |
vessel | 3.40e-07 | 68 |
circulatory system | 3.68e-07 | 112 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.