FFCP PHASE1:Hg19::chr11:62623497..62623508,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=6520|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=11026|TSSclassifier=S|UniProt=P08195|association_with_transcript=-9bp_to_ENST00000377892,uc001nwb.2,uc001nwc.2,uc001nwd.2,uc001nwe.2,uc001nwf.2_5end|description=CAGE_peak_13_at_SLC3A2_5end|id=chr11:62623497..62623508,+|ontology_enrichment_celltype=CL:0000066!1.58e-24!254|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=CL:0000066,1.81e-15,253|ontology_enrichment_development_v019=UBERON:0008947;1.93e-13;29|ontology_enrichment_disease=DOID:305!1.94e-28!106;DOID:0050687!4.09e-23!143;DOID:162!1.61e-22!235;DOID:14566!1.08e-21!239;DOID:7!7.03e-07!39|ontology_enrichment_disease_v019=DOID:305;1.84e-08;106!DOID:5093;4.27e-08;4!DOID:1612;4.27e-08;4|ontology_enrichment_disease_v019_2=DOID:305,3.63e-19,106;DOID:0050687,2.30e-14,143;DOID:162,1.55e-10,235;DOID:14566,3.95e-10,239;DOID:5093,3.74e-08,4;DOID:1612,3.74e-08,4|ontology_enrichment_uberon=UBERON:0001737!3.68e-08!9;UBERON:0004921!7.18e-08!129;UBERON:0004185!7.18e-08!129;UBERON:0001041!8.89e-08!98;UBERON:0000072!4.91e-07!46;UBERON:0001007!9.59e-07!155;UBERON:0001555!9.59e-07!155;UBERON:0007026!9.59e-07!155|ontology_enrichment_uberon_v019=UBERON:0001737;6.05e-28;9!UBERON:0001557;6.05e-28;9!UBERON:0000072;6.84e-09;37!UBERON:0000065;4.62e-07;44|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.35e-29,9;UBERON:0001557,1.69e-15,19;UBERON:0008947,8.15e-10,38;UBERON:0003258,8.15e-10,38;UBERON:0000072,9.99e-09,47;UBERON:0000065,3.14e-07,54|phase1_expression=0,0,0.422863212287913,0,0,0,0,1.26343974685366,0.261185628199839,0.245733936501509,2.09340350391728,0,0.527533956456907,0,0.331397375727916,0,0,0,0.487932798790507,0.246242116153576,0.612002073732759,0.313454721478088,0,0.547497700291537,0.125542639594803,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.422510572623884,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0.294605907474837,0,0.270803863765016,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0.728590576585084,2.22470665670658,0,0.522389211897802,0.26591592103773,0,0,0,0.39752481473341,1.72046919021225,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0.516833518338658,0,0,0.402829317109147,0,0,0,0,0.535798369704479,0,0.225222960966644,0,0,0.549605231791222,0,0,1.3082821564276,0,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,1.12135520028461,1.06748995729705,0.74000264525148,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,1.71141546463335,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0.625592599359821,0,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0.506328996723799,0,0,0,0.323292113637624,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0,0.731842236777572,0.132529768321485,0.580969714347592,0.518305275076852,0.504641701751257,0,0,0,0,0,0.721879481669586,2.72105640091641,3.70886318171824,1.44606617930089,1.43382164552112,1.96091499683166,1.89816495288877,1.8876383142423,2.35465758150415,3.07797725557112,0,0,0,0,0,0.982827216677626,1.18157981336281,0.441463099414651,0.491953754172454,0.171567810298526,0.219500570817251,0,0.402115889646523,0.370353780634118,0.651616610620649,2.07986957055916,2.88662684050547,0,0.352226082707465,0,0,0.380508304469197,1.58040879591855,2.57545848628462,0.492434012174795,0.468008530278475,0.148631162288728,0,0,0,0.268675568108545,1.74380363108377,0,0,0.088048434013226,0,0,0,1.0159663086747,1.52795370223311,2.34434894420094,0,1.7480673759565,0.300343057843917,0.571652865261156,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0.35142424497814,0.300946099727719,2.27407504055985,0,0.664225598535437,0.368738337083406,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0.519254429183621,0.232420756919918,0.604297247958111,0.40101294060657,0.644566922551274,0.229628896329213,0.364182336013434,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0.769350375349168,0.656029291399411,0.325378394664303,0.206082023295445,0.183138929636687,0.330037999682352,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.307007349452259,0.137836572484531,0,0,0.170453254832202,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0.616067160352178,0.5323060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00981,0,0.0645889098360061,0.186224142887574,0.224263725161227,0,0,0.653150243690884,0.684466602170562,0.0673520530145875,0.286888821570705,0,0.244209805832924,0.640364075266293,0,0.269475606319761,0,0,0,0,0.603821380773079,0|short_description=p13@SLC3A2}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=6520 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11026 | |||
|TSSclassifier=S | |||
|UniProt=P08195 | |||
|association_with_transcript=-9bp_to_ENST00000377892,uc001nwb.2,uc001nwc.2,uc001nwd.2,uc001nwe.2,uc001nwf.2_5end | |||
|description=CAGE_peak_13_at_SLC3A2_5end | |||
|id=chr11:62623497..62623508,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.58e-24!254 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.81e-15,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.93e-13;29 | |||
|ontology_enrichment_disease=DOID:305!1.94e-28!106;DOID:0050687!4.09e-23!143;DOID:162!1.61e-22!235;DOID:14566!1.08e-21!239;DOID:7!7.03e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:305;1.84e-08;106!DOID:5093;4.27e-08;4!DOID:1612;4.27e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.63e-19,106;DOID:0050687,2.30e-14,143;DOID:162,1.55e-10,235;DOID:14566,3.95e-10,239;DOID:5093,3.74e-08,4;DOID:1612,3.74e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001737!3.68e-08!9;UBERON:0004921!7.18e-08!129;UBERON:0004185!7.18e-08!129;UBERON:0001041!8.89e-08!98;UBERON:0000072!4.91e-07!46;UBERON:0001007!9.59e-07!155;UBERON:0001555!9.59e-07!155;UBERON:0007026!9.59e-07!155 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.05e-28;9!UBERON:0001557;6.05e-28;9!UBERON:0000072;6.84e-09;37!UBERON:0000065;4.62e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.35e-29,9;UBERON:0001557,1.69e-15,19;UBERON:0008947,8.15e-10,38;UBERON:0003258,8.15e-10,38;UBERON:0000072,9.99e-09,47;UBERON:0000065,3.14e-07,54 | |||
|phase1_expression=0,0,0.422863212287913,0,0,0,0,1.26343974685366,0.261185628199839,0.245733936501509,2.09340350391728,0,0.527533956456907,0,0.331397375727916,0,0,0,0.487932798790507,0.246242116153576,0.612002073732759,0.313454721478088,0,0.547497700291537,0.125542639594803,0.0764134057479513,0.164201178899891,0.0787107813136792,0,0,0,0,0.30120591877825,0,0,0.142169232487422,0.293600439334847,0,0,0,0.223915474239924,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368277635987565,0,0.422510572623884,0,0,0,0,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0.294605907474837,0,0.270803863765016,0,0,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0,0,0,0,0.318565414324097,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0,0,0.144846518960824,0,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0.728590576585084,2.22470665670658,0,0.522389211897802,0.26591592103773,0,0,0,0.39752481473341,1.72046919021225,0,0,0.419499436209906,0.275118041940067,0.417989933073621,0.516833518338658,0,0,0.402829317109147,0,0,0,0,0.535798369704479,0,0.225222960966644,0,0,0.549605231791222,0,0,1.3082821564276,0,0.25326102332916,0.132409180813219,0.286836620748814,0.354668382198357,1.12135520028461,1.06748995729705,0.74000264525148,0,0,0.163461903113459,0.151357427644931,0,0,0.312160076830321,1.71141546463335,0,0,0.161872944368132,0.140450806702248,0.204154171254893,0,0,0,0,0,0,0,0.625592599359821,0,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0,0,0,0,0,0,0.506328996723799,0,0,0,0.323292113637624,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0,0.731842236777572,0.132529768321485,0.580969714347592,0.518305275076852,0.504641701751257,0,0,0,0,0,0.721879481669586,2.72105640091641,3.70886318171824,1.44606617930089,1.43382164552112,1.96091499683166,1.89816495288877,1.8876383142423,2.35465758150415,3.07797725557112,0,0,0,0,0,0.982827216677626,1.18157981336281,0.441463099414651,0.491953754172454,0.171567810298526,0.219500570817251,0,0.402115889646523,0.370353780634118,0.651616610620649,2.07986957055916,2.88662684050547,0,0.352226082707465,0,0,0.380508304469197,1.58040879591855,2.57545848628462,0.492434012174795,0.468008530278475,0.148631162288728,0,0,0,0.268675568108545,1.74380363108377,0,0,0.088048434013226,0,0,0,1.0159663086747,1.52795370223311,2.34434894420094,0,1.7480673759565,0.300343057843917,0.571652865261156,0.224262168690721,0,0.07333828582095,0.129271715757778,0,0.845302752556,0,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,0,0,0.289562613335158,0,0,0.112085143993527,0,0,0,0,0,0,0.335032530668698,0,0,0,0,0.12269149171914,0,0,0,0,0.157702415033935,0.35142424497814,0.300946099727719,2.27407504055985,0,0.664225598535437,0.368738337083406,0.173767228936166,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0.177561725313127,0,0.519254429183621,0.232420756919918,0.604297247958111,0.40101294060657,0.644566922551274,0.229628896329213,0.364182336013434,0,0,0,0,0,0,0,0,0.431831832204279,0,0,0,0.254876273045038,0,0,0.219259876645935,0,0.769350375349168,0.656029291399411,0.325378394664303,0.206082023295445,0.183138929636687,0.330037999682352,0,0,1.6068392984416,0.096670718292122,0.308097234229289,0.307007349452259,0.137836572484531,0,0,0.170453254832202,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0,0,0.616067160352178,0.532306030317022,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0,0,0,0.202182481573316,0,0,0.975267478179181,0,0,0.136499911407986,0.141405431953713,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0.281695602532241,0.143411352204052,0.294747123039363,0,0,0,0,0,0,0.288666338176536,0,0,0.282431402330337,0.43050537267123,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0.320472213382419,2.88743956579008,0.980160863924127,0.185803175125719,0.28853842595289,0.142283686696828,0,0.199579371432817,0,0,0.324621940274555,0,0.456469358066384,0.156679895773023,0,0.169291777801603,0,0.403599414382095,1.27753871307098,0,0.614481528616916,0.447352215784832,0.333698283423817,0.390776190804081,0,0,1.35227839237992,0,0,0.18714054040822,0,0.485442086998054,0.111443384277478,0,0,0,0,0,0.422008249231538,0.111308705022906,0,0.211125408127993,0.19924798825107,0,0,0.306806047506464,0,0.622079175323615,0.359473404589307,1.07412704805365,0,0.0986434056369336,0,0,0,0.278304294485554,0,2.08342208868187,0.437299999980979,0.724999575434793,4.43794448313449,1.01701460117107,2.12748913591143,0,0,0.520874984799877,0,0.120596438625408,0,0.442317039724898,0.591095237907095,0,1.74301541630384,0.697118721393016,0.0769502585037971,0.113942055847001,0.69169171316418,0.538545866458633,1.08647371922008,0,0.183195186803725,0.533034776018635,0,0,0.332423363800313,0.225595660617181,0.784250137270958,0.167821586975843,0.189753732724185,0.635746315921515,1.47698645169619,0.326465616318295,0.706765357169704,0,0.995261931078505,0.0884575645033392,0,0,0.123563938946503,0.104421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| |||
|short_description=p13@SLC3A2 | |||
}} |
Revision as of 18:36, 10 September 2013
Short description: | p13@SLC3A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_13_at_SLC3A2_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000377892, uc001nwb.2, uc001nwc.2, uc001nwd.2, uc001nwe.2, uc001nwf.2_5end |
EntrezGene: | SLC3A2 |
HGNC: | 11026 |
UniProt: | P08195 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.81e-15 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.35e-29 | 9 |
upper respiratory tract | 1.69e-15 | 19 |
respiratory primordium | 8.15e-10 | 38 |
endoderm of foregut | 8.15e-10 | 38 |
segment of respiratory tract | 9.99e-09 | 47 |
respiratory tract | 3.14e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.63e-19 | 106 |
cell type cancer | 2.30e-14 | 143 |
cancer | 1.55e-10 | 235 |
disease of cellular proliferation | 3.95e-10 | 239 |
thoracic cancer | 3.74e-08 | 4 |
breast cancer | 3.74e-08 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.