FFCP PHASE1:Hg19::chr11:57194218..57194247,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=29015|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=17466|TSSclassifier=S|UniProt=|association_with_transcript=0bp_to_ENST00000529554_5end|coexpression_cluster_id=C0|description=CAGE_peak_4_at_SLC43A3_5end|id=chr11:57194218..57194247,-|ontology_enrichment_celltype=CL:0002009!9.94e-41!65;CL:0000766!2.09e-40!76;CL:0000557!1.06e-39!71;CL:0002194!5.22e-39!63;CL:0000576!5.22e-39!63;CL:0000040!5.22e-39!63;CL:0000559!5.22e-39!63;CL:0002057!1.53e-38!42;CL:0000839!4.31e-37!70;CL:0000860!1.29e-34!45;CL:0000763!1.83e-27!112;CL:0000049!1.83e-27!112;CL:0000738!3.32e-21!140;CL:0002087!9.32e-18!119;CL:0000219!3.12e-17!390;CL:0002031!3.19e-17!124;CL:0000134!9.06e-17!358;CL:0002320!2.20e-16!365;CL:0000037!2.53e-16!172;CL:0000566!2.53e-16!172;CL:0000988!6.84e-16!182;CL:0000048!1.25e-15!430;CL:0000723!1.49e-15!436;CL:0000034!6.13e-15!444;CL:0002032!1.12e-14!165;CL:0000837!1.12e-14!165;CL:0002371!2.18e-09!591;CL:0002393!1.88e-08!9;CL:0002397!1.88e-08!9;CL:0000063!4.80e-08!578;CL:0000144!5.94e-08!625;CL:0000012!8.36e-07!682|ontology_enrichment_celltype_v019=CL:0000860;2.21e-58;33!CL:0002057;2.21e-58;33!CL:0000473;6.55e-56;39!CL:0000234;6.55e-56;39!CL:0000576;3.21e-41;48!CL:0000766;3.26e-30;69!CL:0000763;4.29e-15;100!CL:0002393;2.62e-14;6!CL:0002397;2.62e-14;6!CL:0000840;1.53e-12;5!CL:0000451;2.92e-11;10!CL:0000738;5.72e-11;136!CL:0002087;9.05e-10;104!CL:0000235;1.27e-09;6!CL:0000767;3.84e-08;3!CL:0000990;3.89e-08;8!CL:0000148;2.35e-07;10!CL:0002567;4.23e-07;3!CL:0000219;4.45e-07;193!CL:0000784;7.57e-07;3|ontology_enrichment_celltype_v019_2=CL:0002009,5.21e-81,61;CL:0000473,1.45e-79,48;CL:0000234,1.45e-79,48;CL:0000766,2.61e-79,72;CL:0000557,7.78e-79,67;CL:0002194,6.82e-77,59;CL:0000576,6.82e-77,59;CL:0000040,6.82e-77,59;CL:0000559,6.82e-77,59;CL:0000839,1.83e-73,66;CL:0000860,5.32e-71,42;CL:0002057,5.32e-71,42;CL:0000763,8.89e-55,108;CL:0000049,8.89e-55,108;CL:0000738,1.20e-45,136;CL:0002031,5.73e-38,120;CL:0002087,1.09e-36,115;CL:0000037,1.74e-35,168;CL:0000988,6.95e-33,177;CL:0002032,7.76e-32,161;CL:0000837,7.76e-32,161;CL:0000219,8.84e-20,386;CL:0000134,4.24e-18,354;CL:0002320,2.09e-17,361;CL:0000048,2.62e-13,427;CL:0000034,5.11e-13,441;CL:0000723,7.06e-13,433;CL:0000840,1.26e-12,5;CL:0001029,1.26e-12,5;CL:0000451,2.84e-11,10;CL:0000235,1.20e-09,6;CL:0002393,2.77e-09,9;CL:0002397,2.77e-09,9;CL:0000990,3.44e-08,8;CL:0000767,3.67e-08,3;CL:0000148,1.89e-07,10;CL:0000541,1.89e-07,10;CL:0002567,3.42e-07,3;CL:0000784,8.45e-07,3|ontology_enrichment_development_v019=CL:0002057;2.31e-52;42!CL:0000049;3.68e-16;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002371!1.22e-36!80;UBERON:0002390!8.69e-34!102;UBERON:0003061!8.69e-34!102;UBERON:0002405!6.72e-33!115;UBERON:0001474!3.49e-32!86;UBERON:0002193!4.01e-32!112;UBERON:0004765!2.13e-25!101;UBERON:0001434!2.13e-25!101;UBERON:0003081!1.57e-19!216;UBERON:0002204!2.81e-17!167;UBERON:0002384!1.14e-15!375;UBERON:0000926!2.39e-10!448;UBERON:0004120!2.39e-10!448;UBERON:0006603!2.39e-10!448|ontology_enrichment_uberon_v019=|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.82e-71,76;UBERON:0001474,1.21e-64,82;UBERON:0002390,3.78e-61,98;UBERON:0003061,3.78e-61,98;UBERON:0002405,4.33e-60,93;UBERON:0004765,1.16e-57,90;UBERON:0002193,4.06e-54,108;UBERON:0001434,1.68e-50,100;UBERON:0002204,4.55e-27,167;UBERON:0003081,2.55e-26,203;UBERON:0002384,3.09e-17,371;UBERON:0000926,1.70e-14,315;UBERON:0004120,1.70e-14,315;UBERON:0006603,1.70e-14,315|phase1_expression=0.726713517082227,0.214100523890983,0.140954404095971,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,1.34465029290355,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,10.2274711980715,8.82807615623589,10.3726802621771,0,0,0,0,0,0,25.4837887924664,36.2985449920956,24.5222283908913,0.671746422719773,0.647787332037959,1.03030227053675,9.59628375945127,7.935394817465,7.27752183563449,21.1510423584173,22.2030659531786,23.2279778171328,23.8784685627385,23.8229457072064,21.9928473796384,30.6823655855591,34.2106882299428,29.7938270507552,12.9887214284397,11.4620583024295,8.53949240891322,18.3650335422542,19.5766706516417,12.7867425159808,10.2253903057882,16.1565562673522,9.37694451171927,33.9544809195443,28.369261234557,22.4216009638407,26.6323585172148,23.4667313289091,25.1939059857935,18.7673845816344,29.4622108790052,28.4816148696796,1.05627643155971,3.4016687994407,1.88692780957538,0.786300418025466,0.450530678524519,0.48217676009124,0.570025487482497,0.99458338599545,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,4.48406850385229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62273696827342,1.0447784237956,1.86141144726411,1.43094374583205,1.14398982156026,1.11437250398869,0.79504962946682,0,0,0,0.419499436209906,0.550236083880135,0,0.775250277507987,0,0,0,0,0,0.735326160691737,0.81014194788176,0.267899184852239,0,0,0,0.949265659568129,0.183201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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=29015 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17466 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000529554_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_4_at_SLC43A3_5end | |||
|id=chr11:57194218..57194247,- | |||
|ontology_enrichment_celltype=CL:0002009!9.94e-41!65;CL:0000766!2.09e-40!76;CL:0000557!1.06e-39!71;CL:0002194!5.22e-39!63;CL:0000576!5.22e-39!63;CL:0000040!5.22e-39!63;CL:0000559!5.22e-39!63;CL:0002057!1.53e-38!42;CL:0000839!4.31e-37!70;CL:0000860!1.29e-34!45;CL:0000763!1.83e-27!112;CL:0000049!1.83e-27!112;CL:0000738!3.32e-21!140;CL:0002087!9.32e-18!119;CL:0000219!3.12e-17!390;CL:0002031!3.19e-17!124;CL:0000134!9.06e-17!358;CL:0002320!2.20e-16!365;CL:0000037!2.53e-16!172;CL:0000566!2.53e-16!172;CL:0000988!6.84e-16!182;CL:0000048!1.25e-15!430;CL:0000723!1.49e-15!436;CL:0000034!6.13e-15!444;CL:0002032!1.12e-14!165;CL:0000837!1.12e-14!165;CL:0002371!2.18e-09!591;CL:0002393!1.88e-08!9;CL:0002397!1.88e-08!9;CL:0000063!4.80e-08!578;CL:0000144!5.94e-08!625;CL:0000012!8.36e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.21e-58;33!CL:0002057;2.21e-58;33!CL:0000473;6.55e-56;39!CL:0000234;6.55e-56;39!CL:0000576;3.21e-41;48!CL:0000766;3.26e-30;69!CL:0000763;4.29e-15;100!CL:0002393;2.62e-14;6!CL:0002397;2.62e-14;6!CL:0000840;1.53e-12;5!CL:0000451;2.92e-11;10!CL:0000738;5.72e-11;136!CL:0002087;9.05e-10;104!CL:0000235;1.27e-09;6!CL:0000767;3.84e-08;3!CL:0000990;3.89e-08;8!CL:0000148;2.35e-07;10!CL:0002567;4.23e-07;3!CL:0000219;4.45e-07;193!CL:0000784;7.57e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,5.21e-81,61;CL:0000473,1.45e-79,48;CL:0000234,1.45e-79,48;CL:0000766,2.61e-79,72;CL:0000557,7.78e-79,67;CL:0002194,6.82e-77,59;CL:0000576,6.82e-77,59;CL:0000040,6.82e-77,59;CL:0000559,6.82e-77,59;CL:0000839,1.83e-73,66;CL:0000860,5.32e-71,42;CL:0002057,5.32e-71,42;CL:0000763,8.89e-55,108;CL:0000049,8.89e-55,108;CL:0000738,1.20e-45,136;CL:0002031,5.73e-38,120;CL:0002087,1.09e-36,115;CL:0000037,1.74e-35,168;CL:0000988,6.95e-33,177;CL:0002032,7.76e-32,161;CL:0000837,7.76e-32,161;CL:0000219,8.84e-20,386;CL:0000134,4.24e-18,354;CL:0002320,2.09e-17,361;CL:0000048,2.62e-13,427;CL:0000034,5.11e-13,441;CL:0000723,7.06e-13,433;CL:0000840,1.26e-12,5;CL:0001029,1.26e-12,5;CL:0000451,2.84e-11,10;CL:0000235,1.20e-09,6;CL:0002393,2.77e-09,9;CL:0002397,2.77e-09,9;CL:0000990,3.44e-08,8;CL:0000767,3.67e-08,3;CL:0000148,1.89e-07,10;CL:0000541,1.89e-07,10;CL:0002567,3.42e-07,3;CL:0000784,8.45e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.31e-52;42!CL:0000049;3.68e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.22e-36!80;UBERON:0002390!8.69e-34!102;UBERON:0003061!8.69e-34!102;UBERON:0002405!6.72e-33!115;UBERON:0001474!3.49e-32!86;UBERON:0002193!4.01e-32!112;UBERON:0004765!2.13e-25!101;UBERON:0001434!2.13e-25!101;UBERON:0003081!1.57e-19!216;UBERON:0002204!2.81e-17!167;UBERON:0002384!1.14e-15!375;UBERON:0000926!2.39e-10!448;UBERON:0004120!2.39e-10!448;UBERON:0006603!2.39e-10!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.82e-71,76;UBERON:0001474,1.21e-64,82;UBERON:0002390,3.78e-61,98;UBERON:0003061,3.78e-61,98;UBERON:0002405,4.33e-60,93;UBERON:0004765,1.16e-57,90;UBERON:0002193,4.06e-54,108;UBERON:0001434,1.68e-50,100;UBERON:0002204,4.55e-27,167;UBERON:0003081,2.55e-26,203;UBERON:0002384,3.09e-17,371;UBERON:0000926,1.70e-14,315;UBERON:0004120,1.70e-14,315;UBERON:0006603,1.70e-14,315 | |||
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| |||
|short_description=p4@SLC43A3 | |||
}} |
Revision as of 18:09, 10 September 2013
Short description: | p4@SLC43A3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_SLC43A3_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 0bp_to_ENST00000529554_5end |
EntrezGene: | SLC43A3 |
HGNC: | 17466 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.82e-71 | 76 |
bone element | 1.21e-64 | 82 |
hematopoietic system | 3.78e-61 | 98 |
blood island | 3.78e-61 | 98 |
immune system | 4.33e-60 | 93 |
skeletal element | 1.16e-57 | 90 |
hemolymphoid system | 4.06e-54 | 108 |
skeletal system | 1.68e-50 | 100 |
musculoskeletal system | 4.55e-27 | 167 |
lateral plate mesoderm | 2.55e-26 | 203 |
connective tissue | 3.09e-17 | 371 |
mesoderm | 1.70e-14 | 315 |
mesoderm-derived structure | 1.70e-14 | 315 |
presumptive mesoderm | 1.70e-14 | 315 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.