FFCP PHASE1:Hg19::chr11:10590173..10590191,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10894|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=14687|TSSclassifier=S|UniProt=Q9Y5Y7|association_with_transcript=46bp_to_ENST00000256178_5end|coexpression_cluster_id=C2091|description=CAGE_peak_1_at_LYVE1_5end|id=chr11:10590173..10590191,-|ontology_enrichment_celltype=CL:0000115!2.91e-20!35;CL:0002139!5.58e-17!24;CL:0002078!8.97e-16!44;CL:0000071!1.91e-12!18;CL:0002546!1.91e-12!18;CL:0000213!1.03e-09!57;CL:0000215!1.03e-09!57|ontology_enrichment_celltype_v019=CL:0000115;7.51e-16;36!CL:0002139;1.23e-14;24!CL:0000071;9.61e-11;18!CL:0002078;5.20e-10;45!CL:0002543;2.74e-07;6!CL:0000213;9.07e-07;58!CL:0000215;9.07e-07;58|ontology_enrichment_celltype_v019_2=CL:0000115,2.78e-19,36;CL:0002139,1.02e-14,24;CL:0002078,1.32e-14,45;CL:0000071,8.57e-11,18;CL:0002546,8.57e-11,18;CL:0000213,2.11e-09,58;CL:0000215,2.11e-09,58;CL:0002543,2.53e-07,6|ontology_enrichment_development_v019=CL:0002546;9.61e-11;18!UBERON:0006601;8.00e-09;82!UBERON:0004872;1.88e-07;7|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!1.46e-63!115;UBERON:0001049!7.29e-25!57;UBERON:0005068!7.29e-25!57;UBERON:0006241!7.29e-25!57;UBERON:0007135!7.29e-25!57;UBERON:0000477!9.60e-24!286;UBERON:0002616!1.08e-23!59;UBERON:0004111!6.84e-23!241;UBERON:0000025!5.28e-21!194;UBERON:0003080!8.49e-20!42;UBERON:0000955!1.83e-19!69;UBERON:0006238!1.83e-19!69;UBERON:0003075!6.36e-19!86;UBERON:0007284!6.36e-19!86;UBERON:0002780!6.78e-19!41;UBERON:0001890!6.78e-19!41;UBERON:0006240!6.78e-19!41;UBERON:0001017!1.01e-18!82;UBERON:0005743!4.77e-18!86;UBERON:0002346!5.65e-18!90;UBERON:0000073!1.95e-15!94;UBERON:0001016!1.95e-15!94;UBERON:0001893!7.88e-15!34;UBERON:0002020!8.10e-15!34;UBERON:0003528!8.10e-15!34;UBERON:0002791!2.58e-14!33;UBERON:0001869!1.36e-13!32;UBERON:0000119!2.82e-13!312;UBERON:0000483!1.77e-12!309;UBERON:0001986!1.91e-12!18;UBERON:0004638!1.91e-12!18;UBERON:0004852!1.91e-12!18;UBERON:0003056!2.88e-12!61;UBERON:0002619!5.46e-12!22;UBERON:0000153!6.47e-12!129;UBERON:0007811!6.47e-12!129;UBERON:0001950!7.55e-11!20;UBERON:0000033!1.09e-10!123;UBERON:0000956!7.30e-10!25;UBERON:0000203!7.30e-10!25;UBERON:0000468!1.88e-09!659;UBERON:0006914!2.76e-09!25;UBERON:0000487!3.60e-09!22;UBERON:0000467!7.54e-09!625;UBERON:0000480!9.36e-09!626;UBERON:0000481!5.04e-08!347;UBERON:0004121!9.67e-08!169;UBERON:0000924!1.66e-07!173;UBERON:0006601!1.66e-07!173;UBERON:0002465!3.70e-07!10;UBERON:0002298!6.69e-07!8;UBERON:0002420!7.90e-07!9;UBERON:0007245!7.90e-07!9;UBERON:0010009!7.90e-07!9;UBERON:0010011!7.90e-07!9;UBERON:0000454!7.90e-07!9|ontology_enrichment_uberon_v019=UBERON:0007023;1.01e-17;114!UBERON:0002780;1.55e-15;41!UBERON:0001890;1.55e-15;41!UBERON:0000073;1.84e-14;53!UBERON:0002616;1.84e-14;53!UBERON:0001893;2.96e-13;34!UBERON:0002791;3.85e-13;32!UBERON:0003528;5.07e-13;34!UBERON:0002020;5.07e-13;34!UBERON:0001869;9.26e-13;32!UBERON:0002619;7.93e-12;22!UBERON:0004638;9.61e-11;18!UBERON:0001986;9.61e-11;18!UBERON:0004852;9.61e-11;18!UBERON:0001950;1.72e-10;20!UBERON:0000956;7.20e-10;25!UBERON:0000203;7.20e-10;25!UBERON:0000955;8.87e-09;68!UBERON:0001017;2.57e-08;75!UBERON:0000487;4.64e-08;22!UBERON:0001016;6.01e-08;83!UBERON:0002420;6.63e-08;9!UBERON:0007245;6.63e-08;9!UBERON:0010009;6.63e-08;9!UBERON:0010011;6.63e-08;9!UBERON:0000454;6.63e-08;9!UBERON:0000125;9.82e-08;9!UBERON:0002308;9.82e-08;9!UBERON:0006914;1.48e-07;25!UBERON:0000922;3.78e-07;49!UBERON:0001871;9.92e-07;6|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.18e-70,114;UBERON:0001049,6.76e-27,56;UBERON:0005068,6.76e-27,56;UBERON:0006241,6.76e-27,56;UBERON:0007135,6.76e-27,56;UBERON:0004111,1.06e-24,240;UBERON:0000073,1.33e-24,53;UBERON:0002616,1.33e-24,53;UBERON:0000025,1.94e-22,192;UBERON:0002780,1.91e-20,41;UBERON:0001890,1.91e-20,41;UBERON:0003080,1.91e-20,41;UBERON:0006240,1.91e-20,41;UBERON:0003075,3.46e-19,82;UBERON:0007284,3.46e-19,82;UBERON:0001017,4.48e-18,81;UBERON:0000955,5.19e-18,68;UBERON:0006238,5.19e-18,68;UBERON:0002346,1.28e-17,86;UBERON:0010314,1.35e-16,132;UBERON:0001016,1.12e-15,89;UBERON:0001893,1.27e-15,34;UBERON:0003528,1.31e-15,34;UBERON:0002020,1.31e-15,34;UBERON:0011216,1.78e-14,223;UBERON:0002791,2.65e-14,32;UBERON:0001869,3.63e-14,32;UBERON:0010371,4.99e-13,104;UBERON:0003056,2.10e-12,61;UBERON:0002619,9.59e-12,22;UBERON:0000119,1.31e-11,309;UBERON:0000483,1.48e-11,306;UBERON:0004638,8.57e-11,18;UBERON:0001986,8.57e-11,18;UBERON:0004852,8.57e-11,18;UBERON:0001950,2.09e-10,20;UBERON:0000956,8.47e-10,25;UBERON:0000203,8.47e-10,25;UBERON:0000487,4.25e-08,22;UBERON:0002420,5.97e-08,9;UBERON:0007245,5.97e-08,9;UBERON:0010009,5.97e-08,9;UBERON:0010011,5.97e-08,9;UBERON:0000454,5.97e-08,9;UBERON:0000125,8.94e-08,9;UBERON:0002308,8.94e-08,9;UBERON:0003076,1.26e-07,15;UBERON:0003057,1.26e-07,15;UBERON:0006914,1.46e-07,25;UBERON:0003103,1.79e-07,68;UBERON:0004121,4.63e-07,171;UBERON:0000924,4.63e-07,171;UBERON:0006601,4.63e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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10894 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14687 | |||
|TSSclassifier=S | |||
|UniProt=Q9Y5Y7 | |||
|association_with_transcript=46bp_to_ENST00000256178_5end | |||
|coexpression_cluster_id=C2091 | |||
|description=CAGE_peak_1_at_LYVE1_5end | |||
|id=chr11:10590173..10590191,- | |||
|ontology_enrichment_celltype=CL:0000115!2.91e-20!35;CL:0002139!5.58e-17!24;CL:0002078!8.97e-16!44;CL:0000071!1.91e-12!18;CL:0002546!1.91e-12!18;CL:0000213!1.03e-09!57;CL:0000215!1.03e-09!57 | |||
|ontology_enrichment_celltype_v019=CL:0000115;7.51e-16;36!CL:0002139;1.23e-14;24!CL:0000071;9.61e-11;18!CL:0002078;5.20e-10;45!CL:0002543;2.74e-07;6!CL:0000213;9.07e-07;58!CL:0000215;9.07e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.78e-19,36;CL:0002139,1.02e-14,24;CL:0002078,1.32e-14,45;CL:0000071,8.57e-11,18;CL:0002546,8.57e-11,18;CL:0000213,2.11e-09,58;CL:0000215,2.11e-09,58;CL:0002543,2.53e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;9.61e-11;18!UBERON:0006601;8.00e-09;82!UBERON:0004872;1.88e-07;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.46e-63!115;UBERON:0001049!7.29e-25!57;UBERON:0005068!7.29e-25!57;UBERON:0006241!7.29e-25!57;UBERON:0007135!7.29e-25!57;UBERON:0000477!9.60e-24!286;UBERON:0002616!1.08e-23!59;UBERON:0004111!6.84e-23!241;UBERON:0000025!5.28e-21!194;UBERON:0003080!8.49e-20!42;UBERON:0000955!1.83e-19!69;UBERON:0006238!1.83e-19!69;UBERON:0003075!6.36e-19!86;UBERON:0007284!6.36e-19!86;UBERON:0002780!6.78e-19!41;UBERON:0001890!6.78e-19!41;UBERON:0006240!6.78e-19!41;UBERON:0001017!1.01e-18!82;UBERON:0005743!4.77e-18!86;UBERON:0002346!5.65e-18!90;UBERON:0000073!1.95e-15!94;UBERON:0001016!1.95e-15!94;UBERON:0001893!7.88e-15!34;UBERON:0002020!8.10e-15!34;UBERON:0003528!8.10e-15!34;UBERON:0002791!2.58e-14!33;UBERON:0001869!1.36e-13!32;UBERON:0000119!2.82e-13!312;UBERON:0000483!1.77e-12!309;UBERON:0001986!1.91e-12!18;UBERON:0004638!1.91e-12!18;UBERON:0004852!1.91e-12!18;UBERON:0003056!2.88e-12!61;UBERON:0002619!5.46e-12!22;UBERON:0000153!6.47e-12!129;UBERON:0007811!6.47e-12!129;UBERON:0001950!7.55e-11!20;UBERON:0000033!1.09e-10!123;UBERON:0000956!7.30e-10!25;UBERON:0000203!7.30e-10!25;UBERON:0000468!1.88e-09!659;UBERON:0006914!2.76e-09!25;UBERON:0000487!3.60e-09!22;UBERON:0000467!7.54e-09!625;UBERON:0000480!9.36e-09!626;UBERON:0000481!5.04e-08!347;UBERON:0004121!9.67e-08!169;UBERON:0000924!1.66e-07!173;UBERON:0006601!1.66e-07!173;UBERON:0002465!3.70e-07!10;UBERON:0002298!6.69e-07!8;UBERON:0002420!7.90e-07!9;UBERON:0007245!7.90e-07!9;UBERON:0010009!7.90e-07!9;UBERON:0010011!7.90e-07!9;UBERON:0000454!7.90e-07!9 | |||
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| |||
|short_description=p1@LYVE1 | |||
}} |
Revision as of 15:30, 10 September 2013
Short description: | p1@LYVE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LYVE1_5end |
Coexpression cluster: | C2091_Hepatic_spleen_Endothelial_lung_lymph_adipose_acute |
Association with transcript: | 46bp_to_ENST00000256178_5end |
EntrezGene: | LYVE1 |
HGNC: | 14687 |
UniProt: | Q9Y5Y7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.78e-19 | 36 |
endothelial cell of vascular tree | 1.02e-14 | 24 |
meso-epithelial cell | 1.32e-14 | 45 |
blood vessel endothelial cell | 8.57e-11 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.57e-11 | 18 |
lining cell | 2.11e-09 | 58 |
barrier cell | 2.11e-09 | 58 |
vein endothelial cell | 2.53e-07 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.