FFCP PHASE1:Hg19::chr11:9809463..9809498,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=81846|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2135|TSSclassifier=S|UniProt=|association_with_transcript=21bp_to_ENST00000525040,uc001mic.2_5end|description=CAGE_peak_2_at_SBF2_5end|id=chr11:9809463..9809498,-|ontology_enrichment_celltype=CL:0000057!6.41e-26!75;CL:0000055!6.14e-24!180;CL:0000048!2.74e-14!430;CL:0000723!1.03e-13!436;CL:0000034!5.63e-13!444;CL:0002371!1.53e-11!591;CL:0002620!6.92e-11!23;CL:0000144!1.17e-09!625;CL:0000188!1.38e-09!9;CL:0000680!3.26e-09!57;CL:0000056!3.26e-09!57;CL:0000355!3.26e-09!57;CL:0002320!4.14e-09!365;CL:0002556!5.40e-09!6;CL:0002552!5.47e-09!5;CL:0000134!2.40e-07!358;CL:0000187!3.39e-07!54;CL:0002570!8.67e-07!8|ontology_enrichment_celltype_v019=CL:0002552;5.41e-16;5!CL:0002504;8.12e-11;3!CL:1000279;8.12e-11;3!CL:1000280;8.12e-11;3!CL:0000135;3.13e-10;3!CL:0000388;3.13e-10;3!CL:0000197;9.93e-10;6!CL:0000098;9.93e-10;6!CL:0002167;9.93e-10;6!CL:0002561;3.38e-08;2!CL:0002598;1.83e-07;2!CL:0002600;1.83e-07;2|ontology_enrichment_celltype_v019_2=CL:0002552,5.99e-16,5;CL:0000057,7.14e-16,76;CL:0002504,8.03e-11,3;CL:1000279,8.03e-11,3;CL:1000280,8.03e-11,3;CL:0000135,4.24e-10,3;CL:0000388,4.24e-10,3;CL:0000197,9.86e-10,6;CL:0000098,9.86e-10,6;CL:0002167,9.86e-10,6;CL:0000048,1.49e-08,427;CL:0000723,2.85e-08,433;CL:0002561,3.39e-08,2;CL:0000034,6.61e-08,441;CL:0002600,1.33e-07,2;CL:0002598,1.51e-07,2;CL:0000680,1.65e-07,58;CL:0000056,1.65e-07,58;CL:0000355,1.65e-07,58;CL:0000187,7.01e-07,55|ontology_enrichment_development_v019=|ontology_enrichment_disease=DOID:17!6.90e-08!5;DOID:450!6.90e-08!5;DOID:66!6.90e-08!5;DOID:423!6.90e-08!5;DOID:0080000!6.90e-08!5;DOID:11722!6.90e-08!5|ontology_enrichment_disease_v019=DOID:3307;7.29e-07;2|ontology_enrichment_disease_v019_2=DOID:3307,3.70e-07,2|ontology_enrichment_uberon=UBERON:0000914!6.43e-15!83;UBERON:0002329!6.43e-15!83;UBERON:0003077!6.43e-15!83;UBERON:0003059!6.43e-15!83;UBERON:0007282!6.43e-15!83;UBERON:0009618!6.43e-15!83;UBERON:0007285!6.43e-15!83;UBERON:0003102!1.57e-14!95;UBERON:0002384!3.60e-10!375;UBERON:0004290!1.92e-09!70;UBERON:0002199!3.01e-09!45;UBERON:0002416!3.01e-09!45;UBERON:0001758!5.40e-09!6;UBERON:0003672!5.40e-09!6;UBERON:0001134!5.52e-09!61;UBERON:0002036!5.52e-09!61;UBERON:0003082!5.52e-09!61;UBERON:0002385!1.72e-08!63;UBERON:0001015!1.72e-08!63;UBERON:0000383!1.72e-08!63;UBERON:0000486!1.74e-08!82;UBERON:0000075!2.36e-08!13;UBERON:0005944!2.36e-08!13;UBERON:0004288!2.36e-08!13;UBERON:0003089!2.36e-08!13;UBERON:0000475!2.90e-08!365;UBERON:0005256!7.40e-08!143;UBERON:0002200!3.86e-07!11;UBERON:0006876!3.86e-07!11|ontology_enrichment_uberon_v019=UBERON:0007846;3.13e-10;3!UBERON:0000043;3.13e-10;3!UBERON:0007845;3.13e-10;3!UBERON:0001828;7.24e-10;8!UBERON:0005933;3.38e-08;2!UBERON:0005942;3.38e-08;2!UBERON:0005932;3.38e-08;2!UBERON:0003688;4.48e-08;6!UBERON:0002358;4.48e-08;6!UBERON:0003684;4.48e-08;6!UBERON:0001178;4.48e-08;6!UBERON:0004457;5.03e-08;9!UBERON:0000042;5.03e-08;9|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.24e-10,3;UBERON:0000043,4.24e-10,3;UBERON:0007845,4.24e-10,3;UBERON:0003102,6.44e-10,99;UBERON:0001828,7.70e-10,8;UBERON:0005933,3.39e-08,2;UBERON:0005942,3.39e-08,2;UBERON:0005932,3.39e-08,2;UBERON:0003688,3.92e-08,6;UBERON:0002358,3.92e-08,6;UBERON:0003684,3.92e-08,6;UBERON:0001178,3.92e-08,6;UBERON:0011137,1.42e-07,14;UBERON:0007524,2.41e-07,73;UBERON:0000165,2.45e-07,29;UBERON:0000930,2.45e-07,29;UBERON:0001134,7.85e-07,62;UBERON:0002036,7.85e-07,62;UBERON:0003082,7.85e-07,62|phase1_expression=0.726713517082227,0.642301571672949,1.83240725324762,0,1.34088328328186,0,0,0.631719873426831,1.04474251279935,0,0,0,0,0.866364470720326,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.794455084879313,0.573673241497627,0,0,0,0,0,0,0,1.36221684880438,0.576175924479999,0.234321431833797,0.624320153660641,0,0.448346041655403,0,0,0,2.24569588380383,1.47401180774122,1.44656093646072,7.12801714369232,3.21447008062124,0,4.31170885089743,0.505008341862199,0.125118519871964,3.04770527032601,0.877955241761676,2.14541457059314,1.50238058906597,0,0.538168907066586,0.85422955527427,3.81477422087211,0.600182192168805,1.54578793857658,0.257640540045629,1.48893485065272,0,0,0.252433774244115,2.48534726334208,5.81925804547723,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,22.289660545535,14.4375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0.845302752556,0.797814349754612,0,0.514414748524284,0,0.266422179016099,0.42893398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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=81846 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2135 | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=21bp_to_ENST00000525040,uc001mic.2_5end | |||
|description=CAGE_peak_2_at_SBF2_5end | |||
|id=chr11:9809463..9809498,- | |||
|ontology_enrichment_celltype=CL:0000057!6.41e-26!75;CL:0000055!6.14e-24!180;CL:0000048!2.74e-14!430;CL:0000723!1.03e-13!436;CL:0000034!5.63e-13!444;CL:0002371!1.53e-11!591;CL:0002620!6.92e-11!23;CL:0000144!1.17e-09!625;CL:0000188!1.38e-09!9;CL:0000680!3.26e-09!57;CL:0000056!3.26e-09!57;CL:0000355!3.26e-09!57;CL:0002320!4.14e-09!365;CL:0002556!5.40e-09!6;CL:0002552!5.47e-09!5;CL:0000134!2.40e-07!358;CL:0000187!3.39e-07!54;CL:0002570!8.67e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002552;5.41e-16;5!CL:0002504;8.12e-11;3!CL:1000279;8.12e-11;3!CL:1000280;8.12e-11;3!CL:0000135;3.13e-10;3!CL:0000388;3.13e-10;3!CL:0000197;9.93e-10;6!CL:0000098;9.93e-10;6!CL:0002167;9.93e-10;6!CL:0002561;3.38e-08;2!CL:0002598;1.83e-07;2!CL:0002600;1.83e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002552,5.99e-16,5;CL:0000057,7.14e-16,76;CL:0002504,8.03e-11,3;CL:1000279,8.03e-11,3;CL:1000280,8.03e-11,3;CL:0000135,4.24e-10,3;CL:0000388,4.24e-10,3;CL:0000197,9.86e-10,6;CL:0000098,9.86e-10,6;CL:0002167,9.86e-10,6;CL:0000048,1.49e-08,427;CL:0000723,2.85e-08,433;CL:0002561,3.39e-08,2;CL:0000034,6.61e-08,441;CL:0002600,1.33e-07,2;CL:0002598,1.51e-07,2;CL:0000680,1.65e-07,58;CL:0000056,1.65e-07,58;CL:0000355,1.65e-07,58;CL:0000187,7.01e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!6.90e-08!5;DOID:450!6.90e-08!5;DOID:66!6.90e-08!5;DOID:423!6.90e-08!5;DOID:0080000!6.90e-08!5;DOID:11722!6.90e-08!5 | |||
|ontology_enrichment_disease_v019=DOID:3307;7.29e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3307,3.70e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000914!6.43e-15!83;UBERON:0002329!6.43e-15!83;UBERON:0003077!6.43e-15!83;UBERON:0003059!6.43e-15!83;UBERON:0007282!6.43e-15!83;UBERON:0009618!6.43e-15!83;UBERON:0007285!6.43e-15!83;UBERON:0003102!1.57e-14!95;UBERON:0002384!3.60e-10!375;UBERON:0004290!1.92e-09!70;UBERON:0002199!3.01e-09!45;UBERON:0002416!3.01e-09!45;UBERON:0001758!5.40e-09!6;UBERON:0003672!5.40e-09!6;UBERON:0001134!5.52e-09!61;UBERON:0002036!5.52e-09!61;UBERON:0003082!5.52e-09!61;UBERON:0002385!1.72e-08!63;UBERON:0001015!1.72e-08!63;UBERON:0000383!1.72e-08!63;UBERON:0000486!1.74e-08!82;UBERON:0000075!2.36e-08!13;UBERON:0005944!2.36e-08!13;UBERON:0004288!2.36e-08!13;UBERON:0003089!2.36e-08!13;UBERON:0000475!2.90e-08!365;UBERON:0005256!7.40e-08!143;UBERON:0002200!3.86e-07!11;UBERON:0006876!3.86e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0007846;3.13e-10;3!UBERON:0000043;3.13e-10;3!UBERON:0007845;3.13e-10;3!UBERON:0001828;7.24e-10;8!UBERON:0005933;3.38e-08;2!UBERON:0005942;3.38e-08;2!UBERON:0005932;3.38e-08;2!UBERON:0003688;4.48e-08;6!UBERON:0002358;4.48e-08;6!UBERON:0003684;4.48e-08;6!UBERON:0001178;4.48e-08;6!UBERON:0004457;5.03e-08;9!UBERON:0000042;5.03e-08;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,4.24e-10,3;UBERON:0000043,4.24e-10,3;UBERON:0007845,4.24e-10,3;UBERON:0003102,6.44e-10,99;UBERON:0001828,7.70e-10,8;UBERON:0005933,3.39e-08,2;UBERON:0005942,3.39e-08,2;UBERON:0005932,3.39e-08,2;UBERON:0003688,3.92e-08,6;UBERON:0002358,3.92e-08,6;UBERON:0003684,3.92e-08,6;UBERON:0001178,3.92e-08,6;UBERON:0011137,1.42e-07,14;UBERON:0007524,2.41e-07,73;UBERON:0000165,2.45e-07,29;UBERON:0000930,2.45e-07,29;UBERON:0001134,7.85e-07,62;UBERON:0002036,7.85e-07,62;UBERON:0003082,7.85e-07,62 | |||
|phase1_expression=0.726713517082227,0.642301571672949,1.83240725324762,0,1.34088328328186,0,0,0.631719873426831,1.04474251279935,0,0,0,0,0.866364470720326,0.994192127183747,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.25326102332916,0.794455084879313,0.573673241497627,0,0,0,0,0,0,0,1.36221684880438,0.576175924479999,0.234321431833797,0.624320153660641,0,0.448346041655403,0,0,0,2.24569588380383,1.47401180774122,1.44656093646072,7.12801714369232,3.21447008062124,0,4.31170885089743,0.505008341862199,0.125118519871964,3.04770527032601,0.877955241761676,2.14541457059314,1.50238058906597,0,0.538168907066586,0.85422955527427,3.81477422087211,0.600182192168805,1.54578793857658,0.257640540045629,1.48893485065272,0,0,0.252433774244115,2.48534726334208,5.81925804547723,0.355009592516614,0,0.339121184620975,0,0,0,0,0,0,0,0,0,0,1.92972281457866,0,22.289660545535,14.4375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,3.57656445851882,0.845302752556,0.797814349754612,0,0.514414748524284,0,0.266422179016099,0.428933980974443,0,0.823240336780769,0,0,0,0,0,0,0,0,0,0,0,0,1.73737568001095,0.821905290201534,0.716243852959582,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.613457458595699,1.50051156317903,1.62759014219841,6.65506756898583,14.6311770813673,30.2788636865155,14.4083940441037,3.61135319673263,0,0,0,0.184369168541703,2.25897397617015,0,0,0,0,0,0,0,0,3.2254015016441,0.460385919864187,0,1.40953064181271,1.53512174720011,0,0,0.771048469013278,1.42049380250502,1.23190734020714,0,0,0,0,0,0.574072240823034,2.1850940160806,2.09799063935079,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0.462145851343933,0.921022048356777,1.10269257987624,3.00776685631166,2.0302337147992,0.511359764496605,0.623224249527161,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2655176988749,0.571890581771475,2.55897791311334,2.56763392820352,0,0,6.29553601541602,3.56898138656871,2.35624804691373,0,0,0,2.92580243453754,0,0,1.36499911407986,0.565621727814851,0,0,0,0,2.89387767133344,2.62357900818653,0,0,0,0.143411352204052,0.294747123039363,0,0,0.422215270595328,1.64647446479951,0.75894634753143,1.04980416073495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593929361665277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.457987967009312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02232813071253,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.895528817321244,1.8697064787778,0,0.378806010550178,1.25783950876288,8.00830099436882,0,0.907385542579434,0,0.295710299979268,0.159296767163702,0,0,0,1.59505028734797,0,0,0,0,0.545545977607678,0,0,0,0,0.686791410365586,1.01024846629776,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,3.87943538059752,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0.521574816907738,1.60342272946051,0,0,0,0,0,0.0852134047591577,0,0,0.31020638566432,0,0,0,0,0,0.205325613712494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,2.23197010900051,1.38652688589425,3.02838593486652,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | |||
|short_description=p2@SBF2 | |||
}} |
Revision as of 20:19, 10 September 2013
Short description: | p2@SBF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_SBF2_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000525040, uc001mic.2_5end |
EntrezGene: | SBF2 |
HGNC: | 2135 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of gingiva | 5.99e-16 | 5 |
fibroblast | 7.14e-16 | 76 |
enteric smooth muscle cell | 8.03e-11 | 3 |
smooth muscle cell of large intestine | 8.03e-11 | 3 |
smooth muscle cell of colon | 8.03e-11 | 3 |
fibrocyte | 4.24e-10 | 3 |
tendon cell | 4.24e-10 | 3 |
receptor cell | 9.86e-10 | 6 |
sensory epithelial cell | 9.86e-10 | 6 |
olfactory epithelial cell | 9.86e-10 | 6 |
multi fate stem cell | 1.49e-08 | 427 |
somatic stem cell | 2.85e-08 | 433 |
outer root sheath cell | 3.39e-08 | 2 |
stem cell | 6.61e-08 | 441 |
smooth muscle cell of trachea | 1.33e-07 | 2 |
bronchial smooth muscle cell | 1.51e-07 | 2 |
muscle precursor cell | 1.65e-07 | 58 |
myoblast | 1.65e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.65e-07 | 58 |
muscle cell | 7.01e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 4.24e-10 | 3 |
tendon | 4.24e-10 | 3 |
regular connective tissue | 4.24e-10 | 3 |
surface structure | 6.44e-10 | 99 |
gingiva | 7.70e-10 | 8 |
hair root sheath | 3.39e-08 | 2 |
hair outer root sheath | 3.39e-08 | 2 |
bulb of hair follicle | 3.39e-08 | 2 |
omentum | 3.92e-08 | 6 |
peritoneum | 3.92e-08 | 6 |
abdominal cavity | 3.92e-08 | 6 |
visceral peritoneum | 3.92e-08 | 6 |
axial skeletal system | 1.42e-07 | 14 |
dense mesenchyme tissue | 2.41e-07 | 73 |
mouth | 2.45e-07 | 29 |
stomodeum | 2.45e-07 | 29 |
skeletal muscle tissue | 7.85e-07 | 62 |
striated muscle tissue | 7.85e-07 | 62 |
myotome | 7.85e-07 | 62 |
Ontology term | p-value | n |
---|---|---|
teratoma | 3.70e-07 | 2 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.