FFCP PHASE1:Hg19::chr11:8739727..8739732,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:8739727..8739732,+|id=chr11:8739727..8739732,+|ontology_enrichment_celltype=CL:0000055!1.20e-23!180;CL:0000057!1.08e-17!75;CL:0002620!1.08e-09!23;CL:0000128!5.64e-08!7;CL:0000126!5.64e-08!7;CL:0000127!5.64e-08!7;CL:0002453!5.64e-08!7;CL:0000243!4.65e-07!15;CL:0000125!4.65e-07!15;CL:0000030!4.65e-07!15;CL:0000339!4.65e-07!15;CL:0000680!5.20e-07!57;CL:0000056!5.20e-07!57;CL:0000355!5.20e-07!57;CL:0000220!5.48e-07!246;CL:0000183!5.70e-07!59;CL:0000548!9.49e-07!679;CL:0000004!9.49e-07!679;CL:0000255!9.49e-07!679;CL:0002321!9.53e-07!248|ontology_enrichment_celltype_v019=CL:0000128;4.27e-19;7!CL:0000126;4.27e-19;7!CL:0000127;4.27e-19;7!CL:0002605;1.24e-09;3!CL:0002620;1.43e-09;23!CL:0000243;3.67e-09;15!CL:0000125;3.67e-09;15!CL:0000064;7.74e-09;3!CL:0000067;7.74e-09;3!CL:0005012;7.74e-09;3!CL:0002304;7.74e-09;3!CL:0002603;1.12e-08;3!CL:0000095;4.86e-08;17!CL:0002363;8.15e-07;2|ontology_enrichment_celltype_v019_2=CL:0000128,4.65e-19,7;CL:0000126,4.65e-19,7;CL:0000127,4.65e-19,7;CL:0002453,4.65e-19,7;CL:0002605,1.21e-09,3;CL:0002620,1.29e-09,23;CL:0000243,3.12e-09,15;CL:0000125,3.12e-09,15;CL:0000030,3.12e-09,15;CL:0000339,3.12e-09,15;CL:0000064,6.25e-09,3;CL:0000067,6.25e-09,3;CL:0005012,6.25e-09,3;CL:0002304,6.25e-09,3;CL:0000057,1.18e-08,76;CL:0002603,1.28e-08,3;CL:0000095,4.21e-08,17;CL:0000123,4.21e-08,17;CL:0002363,8.12e-07,2;CL:0000008,8.12e-07,2|ontology_enrichment_development_v019=CL:0000339;3.67e-09;15!CL:0000008;8.15e-07;2|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000475!9.44e-14!365;UBERON:0005256!4.28e-10!143;UBERON:0000481!1.44e-09!347;UBERON:0002200!3.13e-09!11;UBERON:0006876!3.13e-09!11;UBERON:0000970!5.12e-09!20;UBERON:0000019!1.82e-08!19;UBERON:0000047!1.82e-08!19;UBERON:0004088!1.82e-08!19;UBERON:0003072!1.82e-08!19;UBERON:0003071!1.82e-08!19;UBERON:0004128!1.82e-08!19;UBERON:0001456!2.48e-08!21;UBERON:0002104!2.57e-08!21;UBERON:0001444!3.41e-08!48;UBERON:0000119!3.48e-08!312;UBERON:0000914!3.59e-08!83;UBERON:0002329!3.59e-08!83;UBERON:0003077!3.59e-08!83;UBERON:0003059!3.59e-08!83;UBERON:0007282!3.59e-08!83;UBERON:0009618!3.59e-08!83;UBERON:0007285!3.59e-08!83;UBERON:0000020!5.90e-08!23;UBERON:0007625!1.05e-07!11;UBERON:0000483!1.10e-07!309;UBERON:0001032!2.19e-07!24;UBERON:0004456!2.19e-07!24;UBERON:0003102!3.05e-07!95;UBERON:0001801!3.11e-07!14;UBERON:0000468!3.64e-07!659|ontology_enrichment_uberon_v019=UBERON:0001801;1.86e-11;14!UBERON:0000019;4.63e-10;19!UBERON:0000047;4.63e-10;19!UBERON:0004088;4.63e-10;19!UBERON:0010230;4.63e-10;19!UBERON:0000970;1.82e-09;20!UBERON:0002104;6.29e-09;21!UBERON:0001456;6.29e-09;21!UBERON:0001778;7.74e-09;3!UBERON:0001775;7.74e-09;3!UBERON:0007625;3.15e-08;11!UBERON:0000020;5.38e-08;23!UBERON:0001032;1.37e-07;24!UBERON:0004456;1.37e-07;24!UBERON:0002203;1.51e-07;6!UBERON:0001768;1.51e-07;6!UBERON:0002200;1.51e-07;6!UBERON:0003566;8.15e-07;2!UBERON:0001777;8.15e-07;2|ontology_enrichment_uberon_v019_2=UBERON:0001801,1.95e-11,14;UBERON:0000019,1.94e-09,20;UBERON:0000047,1.94e-09,20;UBERON:0010312,1.94e-09,20;UBERON:0004088,1.94e-09,20;UBERON:0010230,1.94e-09,20;UBERON:0003072,1.94e-09,20;UBERON:0004128,1.94e-09,20;UBERON:0003071,1.94e-09,20;UBERON:0001778,6.25e-09,3;UBERON:0001775,6.25e-09,3;UBERON:0000970,6.67e-09,21;UBERON:0002104,6.67e-09,21;UBERON:0001456,2.05e-08,22;UBERON:0007625,3.32e-08,11;UBERON:0002203,1.37e-07,6;UBERON:0001768,1.37e-07,6;UBERON:0002200,1.37e-07,6;UBERON:0000020,1.45e-07,24;UBERON:0001032,1.45e-07,24;UBERON:0004456,1.45e-07,24;UBERON:0003566,8.12e-07,2;UBERON:0001777,8.12e-07,2;UBERON:0000488,8.91e-07,4|phase1_expression=0.181678379270557,0.642301571672949,0,2.00146596706261,0,0,0,0,0,1.22866968250754,2.79120467188971,0.873765488520689,1.05506791291381,0.74259811776028,0,1.34465029290355,0.602694528023977,0,0,5.54044761345546,1.02000345622126,1.88072832886853,2.28988789704845,5.61185142798825,4.5195350254129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0,0,0,2.45790524626576,2.21729397462564,1.40535657109002,0,0,0,0,0,0,0,0,0,0,0,0,0.56530794192401,0,0,0,0.258416759169329,0,0,0,0,0.24406205754817,0,0,0.357198913136319,0.22452937262617,0.225222960966644,0,0,0.366403487860815,0,0,1.3082821564276,0,0.379891534993739,0.132409180813219,0.286836620748814,0,1.12135520028461,1.06748995729705,0.24666754841716,0,0.269421344139376,0.490385709340376,0.756787138224657,0.576175924479999,0.70296429550139,0,0,0,0.822041490506354,1.45685649931318,0.702254033511242,1.22492502752936,1.35117749042945,0.206651562351531,0,0.494533858557114,0.910161361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7,0,0,0|short_description=p@chr11:8739727..8739732,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr11:8739727..8739732,+ | |||
|id=chr11:8739727..8739732,+ | |||
|ontology_enrichment_celltype=CL:0000055!1.20e-23!180;CL:0000057!1.08e-17!75;CL:0002620!1.08e-09!23;CL:0000128!5.64e-08!7;CL:0000126!5.64e-08!7;CL:0000127!5.64e-08!7;CL:0002453!5.64e-08!7;CL:0000243!4.65e-07!15;CL:0000125!4.65e-07!15;CL:0000030!4.65e-07!15;CL:0000339!4.65e-07!15;CL:0000680!5.20e-07!57;CL:0000056!5.20e-07!57;CL:0000355!5.20e-07!57;CL:0000220!5.48e-07!246;CL:0000183!5.70e-07!59;CL:0000548!9.49e-07!679;CL:0000004!9.49e-07!679;CL:0000255!9.49e-07!679;CL:0002321!9.53e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0000128;4.27e-19;7!CL:0000126;4.27e-19;7!CL:0000127;4.27e-19;7!CL:0002605;1.24e-09;3!CL:0002620;1.43e-09;23!CL:0000243;3.67e-09;15!CL:0000125;3.67e-09;15!CL:0000064;7.74e-09;3!CL:0000067;7.74e-09;3!CL:0005012;7.74e-09;3!CL:0002304;7.74e-09;3!CL:0002603;1.12e-08;3!CL:0000095;4.86e-08;17!CL:0002363;8.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000128,4.65e-19,7;CL:0000126,4.65e-19,7;CL:0000127,4.65e-19,7;CL:0002453,4.65e-19,7;CL:0002605,1.21e-09,3;CL:0002620,1.29e-09,23;CL:0000243,3.12e-09,15;CL:0000125,3.12e-09,15;CL:0000030,3.12e-09,15;CL:0000339,3.12e-09,15;CL:0000064,6.25e-09,3;CL:0000067,6.25e-09,3;CL:0005012,6.25e-09,3;CL:0002304,6.25e-09,3;CL:0000057,1.18e-08,76;CL:0002603,1.28e-08,3;CL:0000095,4.21e-08,17;CL:0000123,4.21e-08,17;CL:0002363,8.12e-07,2;CL:0000008,8.12e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000339;3.67e-09;15!CL:0000008;8.15e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!9.44e-14!365;UBERON:0005256!4.28e-10!143;UBERON:0000481!1.44e-09!347;UBERON:0002200!3.13e-09!11;UBERON:0006876!3.13e-09!11;UBERON:0000970!5.12e-09!20;UBERON:0000019!1.82e-08!19;UBERON:0000047!1.82e-08!19;UBERON:0004088!1.82e-08!19;UBERON:0003072!1.82e-08!19;UBERON:0003071!1.82e-08!19;UBERON:0004128!1.82e-08!19;UBERON:0001456!2.48e-08!21;UBERON:0002104!2.57e-08!21;UBERON:0001444!3.41e-08!48;UBERON:0000119!3.48e-08!312;UBERON:0000914!3.59e-08!83;UBERON:0002329!3.59e-08!83;UBERON:0003077!3.59e-08!83;UBERON:0003059!3.59e-08!83;UBERON:0007282!3.59e-08!83;UBERON:0009618!3.59e-08!83;UBERON:0007285!3.59e-08!83;UBERON:0000020!5.90e-08!23;UBERON:0007625!1.05e-07!11;UBERON:0000483!1.10e-07!309;UBERON:0001032!2.19e-07!24;UBERON:0004456!2.19e-07!24;UBERON:0003102!3.05e-07!95;UBERON:0001801!3.11e-07!14;UBERON:0000468!3.64e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001801;1.86e-11;14!UBERON:0000019;4.63e-10;19!UBERON:0000047;4.63e-10;19!UBERON:0004088;4.63e-10;19!UBERON:0010230;4.63e-10;19!UBERON:0000970;1.82e-09;20!UBERON:0002104;6.29e-09;21!UBERON:0001456;6.29e-09;21!UBERON:0001778;7.74e-09;3!UBERON:0001775;7.74e-09;3!UBERON:0007625;3.15e-08;11!UBERON:0000020;5.38e-08;23!UBERON:0001032;1.37e-07;24!UBERON:0004456;1.37e-07;24!UBERON:0002203;1.51e-07;6!UBERON:0001768;1.51e-07;6!UBERON:0002200;1.51e-07;6!UBERON:0003566;8.15e-07;2!UBERON:0001777;8.15e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001801,1.95e-11,14;UBERON:0000019,1.94e-09,20;UBERON:0000047,1.94e-09,20;UBERON:0010312,1.94e-09,20;UBERON:0004088,1.94e-09,20;UBERON:0010230,1.94e-09,20;UBERON:0003072,1.94e-09,20;UBERON:0004128,1.94e-09,20;UBERON:0003071,1.94e-09,20;UBERON:0001778,6.25e-09,3;UBERON:0001775,6.25e-09,3;UBERON:0000970,6.67e-09,21;UBERON:0002104,6.67e-09,21;UBERON:0001456,2.05e-08,22;UBERON:0007625,3.32e-08,11;UBERON:0002203,1.37e-07,6;UBERON:0001768,1.37e-07,6;UBERON:0002200,1.37e-07,6;UBERON:0000020,1.45e-07,24;UBERON:0001032,1.45e-07,24;UBERON:0004456,1.45e-07,24;UBERON:0003566,8.12e-07,2;UBERON:0001777,8.12e-07,2;UBERON:0000488,8.91e-07,4 | |||
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| |||
|short_description=p@chr11:8739727..8739732,+ | |||
}} |
Revision as of 20:05, 10 September 2013
Short description: | p@chr11:8739727..8739732, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:8739727..8739732, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte | 4.65e-19 | 7 |
macroglial cell | 4.65e-19 | 7 |
astrocyte | 4.65e-19 | 7 |
oligodendrocyte precursor cell | 4.65e-19 | 7 |
astrocyte of the cerebral cortex | 1.21e-09 | 3 |
skin fibroblast | 1.29e-09 | 23 |
glial cell (sensu Vertebrata) | 3.12e-09 | 15 |
glial cell | 3.12e-09 | 15 |
glioblast | 3.12e-09 | 15 |
glioblast (sensu Vertebrata) | 3.12e-09 | 15 |
ciliated cell | 6.25e-09 | 3 |
ciliated epithelial cell | 6.25e-09 | 3 |
multi-ciliated epithelial cell | 6.25e-09 | 3 |
non-pigmented ciliary epithelial cell | 6.25e-09 | 3 |
fibroblast | 1.18e-08 | 76 |
astrocyte of the cerebellum | 1.28e-08 | 3 |
neuron associated cell | 4.21e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 4.21e-08 | 17 |
keratocyte | 8.12e-07 | 2 |
migratory cranial neural crest cell | 8.12e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
anterior segment of eyeball | 1.95e-11 | 14 |
camera-type eye | 1.94e-09 | 20 |
simple eye | 1.94e-09 | 20 |
immature eye | 1.94e-09 | 20 |
ocular region | 1.94e-09 | 20 |
eyeball of camera-type eye | 1.94e-09 | 20 |
optic cup | 1.94e-09 | 20 |
optic vesicle | 1.94e-09 | 20 |
eye primordium | 1.94e-09 | 20 |
ciliary epithelium | 6.25e-09 | 3 |
ciliary body | 6.25e-09 | 3 |
eye | 6.67e-09 | 21 |
visual system | 6.67e-09 | 21 |
face | 2.05e-08 | 22 |
pigment epithelium of eye | 3.32e-08 | 11 |
vasculature of eye | 1.37e-07 | 6 |
uvea | 1.37e-07 | 6 |
vasculature of head | 1.37e-07 | 6 |
sense organ | 1.45e-07 | 24 |
sensory system | 1.45e-07 | 24 |
entire sense organ system | 1.45e-07 | 24 |
head connective tissue | 8.12e-07 | 2 |
substantia propria of cornea | 8.12e-07 | 2 |
atypical epithelium | 8.91e-07 | 4 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.