FFCP PHASE1:Hg19::chr11:5710963..5710974,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=10346|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=16379|TSSclassifier=S|UniProt=Q8IYM9|association_with_transcript=44bp_to_ENST00000379965,uc001mbr.2,uc009yes.2,uc009yet.1,uc010qzm.1_5end|description=CAGE_peak_6_at_TRIM22_5end|id=chr11:5710963..5710974,+|ontology_enrichment_celltype=CL:0002139!1.61e-07!24;CL:0000048!7.39e-07!430|ontology_enrichment_celltype_v019=CL:0002139;3.53e-09;24!CL:0000136;2.09e-08;13!CL:0000071;1.06e-07;18!CL:0002544;2.59e-07;6|ontology_enrichment_celltype_v019_2=CL:0000136,1.12e-10,15;CL:0002139,1.53e-09,24;CL:0000071,8.26e-08,18;CL:0002546,8.26e-08,18;CL:0002544,2.52e-07,6;CL:0002615,6.40e-07,3|ontology_enrichment_development_v019=CL:0002546;1.06e-07;18|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000055!7.66e-10!69;UBERON:0001981!2.97e-09!60;UBERON:0007500!2.97e-09!60;UBERON:0004537!2.97e-09!60;UBERON:0006965!2.97e-09!60;UBERON:0002049!7.08e-09!79;UBERON:0007798!7.08e-09!79;UBERON:0001637!4.41e-07!42;UBERON:0003509!4.41e-07!42;UBERON:0004572!4.41e-07!42;UBERON:0004535!4.46e-07!110;UBERON:0004872!5.17e-07!84|ontology_enrichment_uberon_v019=UBERON:0000947;1.30e-13;21!UBERON:0010191;1.30e-13;21!UBERON:0004573;4.04e-11;33!UBERON:0004571;4.04e-11;33!UBERON:0001637;6.59e-11;42!UBERON:0003509;6.59e-11;42!UBERON:0004572;6.59e-11;42!UBERON:0007500;2.43e-09;56!UBERON:0001981;2.43e-09;56!UBERON:0004537;2.43e-09;56!UBERON:0000055;3.60e-09;65!UBERON:0003688;4.19e-08;6!UBERON:0002358;4.19e-08;6!UBERON:0003684;4.19e-08;6!UBERON:0001178;4.19e-08;6!UBERON:0004638;1.06e-07;18!UBERON:0001986;1.06e-07;18!UBERON:0004852;1.06e-07;18!UBERON:0004457;3.85e-07;9!UBERON:0000042;3.85e-07;9!UBERON:0002049;5.12e-07;75!UBERON:0007798;5.12e-07;75!UBERON:0001013;5.31e-07;14|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.47e-17,68;UBERON:0007500,6.06e-17,59;UBERON:0001981,6.06e-17,59;UBERON:0004537,6.06e-17,59;UBERON:0006965,6.06e-17,59;UBERON:0002049,3.91e-14,78;UBERON:0007798,3.91e-14,78;UBERON:0000947,2.52e-13,21;UBERON:0010191,2.52e-13,21;UBERON:0001637,3.28e-13,42;UBERON:0003509,3.28e-13,42;UBERON:0004572,3.28e-13,42;UBERON:0004573,3.81e-11,33;UBERON:0004571,3.81e-11,33;UBERON:0004872,1.01e-10,83;UBERON:0004535,2.61e-09,109;UBERON:0001009,7.84e-09,112;UBERON:0003688,2.12e-08,6;UBERON:0002358,2.12e-08,6;UBERON:0003684,2.12e-08,6;UBERON:0001178,2.12e-08,6;UBERON:0004638,8.26e-08,18;UBERON:0001986,8.26e-08,18;UBERON:0004852,8.26e-08,18;UBERON:0001013,8.37e-07,14|phase1_expression=2.18014055124668,2.5692062866918,3.94672331468719,2.00146596706261,1.78784437770915,0,2.53299878168311,1.26343974685366,1.82829939739887,0,0,0,0,0.247532705920093,0,2.01697543935533,1.20538905604795,2.19093027116212,1.95173119516203,0,0,0,1.43117993565528,0.273748850145768,0,0.305653622991805,0.656804715599566,0.393553906568396,0.393364276848904,1.53531759238885,0.154816123316076,0,0,0,0.92960640696362,0.142169232487422,1.46800219667424,0.553995408531877,0.200544447470142,0.434021741431704,0.895661896959697,0.971680998056939,0.257575567634187,0,0,0.485168122375632,0.697287110717054,0,0.619412741790207,1.1507695692886,1.0246428261164,1.18241114944293,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0.224723484445085,0.918251677112708,0.962787081228281,0,0.989553900560148,1.19678194572979,0.852449501065388,0.580418477257168,0,0.622822248995575,0.502497330513487,0.521482918420201,0.868755378820466,1.21079900526674,0.368277635987565,0.632924774881769,0.211255286311942,0.637812899895131,0.419317291016752,0.561643155732475,0.600707571366025,0.16072558669708,1.14005097496499,0.59675003159727,0.365328307529268,0,1.09227722252426,0,2.13365111283254,3.2031678962881,0.574752439954483,1.32208974556972,0,0.569212969109448,0,1.91136614062614,1.32171328579026,0.560508562981536,0.790152254325231,0.393419540227666,0,0.411202997999018,0.167186495390678,1.30368906653436,0.946895611469467,1.94826728407911,0.668462741311041,2.3568472597987,1.55073726208535,1.08321545506006,0.768547918354051,0.520237390239513,1.15106533222573,0.276350017785848,0.869409257205157,0.741432815810302,0.267540828089713,2.09071047609954,0.566546713487831,0.766440987203842,1.37450978193052,0.253019692019503,0.318565414324097,0.651083453856419,0.950452044448374,0.752875595388864,1.4078527226986,0,3.07810427657222,0,0.201606743224732,0,1.15859523106239,0,0.670700859703636,0.12786256184353,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.196468613246569,0.364295288292542,0,0,0,0.132957960518865,0.715471872916026,0.571994910780128,0.371457501329565,1.19257444420023,1.72046919021225,2.77712401286075,0,0.838998872419812,1.6507082516404,0.417989933073621,1.55050055501597,1.77883131343355,1.67360306382335,0.805658634218294,1.52054421143703,0.976248230192678,1.10298924103761,1.62028389576352,1.16089646769304,1.34717623575702,0.225222960966644,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=10346 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16379 | |||
|TSSclassifier=S | |||
|UniProt=Q8IYM9 | |||
|association_with_transcript=44bp_to_ENST00000379965,uc001mbr.2,uc009yes.2,uc009yet.1,uc010qzm.1_5end | |||
|description=CAGE_peak_6_at_TRIM22_5end | |||
|id=chr11:5710963..5710974,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.61e-07!24;CL:0000048!7.39e-07!430 | |||
|ontology_enrichment_celltype_v019=CL:0002139;3.53e-09;24!CL:0000136;2.09e-08;13!CL:0000071;1.06e-07;18!CL:0002544;2.59e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.12e-10,15;CL:0002139,1.53e-09,24;CL:0000071,8.26e-08,18;CL:0002546,8.26e-08,18;CL:0002544,2.52e-07,6;CL:0002615,6.40e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.06e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!7.66e-10!69;UBERON:0001981!2.97e-09!60;UBERON:0007500!2.97e-09!60;UBERON:0004537!2.97e-09!60;UBERON:0006965!2.97e-09!60;UBERON:0002049!7.08e-09!79;UBERON:0007798!7.08e-09!79;UBERON:0001637!4.41e-07!42;UBERON:0003509!4.41e-07!42;UBERON:0004572!4.41e-07!42;UBERON:0004535!4.46e-07!110;UBERON:0004872!5.17e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0000947;1.30e-13;21!UBERON:0010191;1.30e-13;21!UBERON:0004573;4.04e-11;33!UBERON:0004571;4.04e-11;33!UBERON:0001637;6.59e-11;42!UBERON:0003509;6.59e-11;42!UBERON:0004572;6.59e-11;42!UBERON:0007500;2.43e-09;56!UBERON:0001981;2.43e-09;56!UBERON:0004537;2.43e-09;56!UBERON:0000055;3.60e-09;65!UBERON:0003688;4.19e-08;6!UBERON:0002358;4.19e-08;6!UBERON:0003684;4.19e-08;6!UBERON:0001178;4.19e-08;6!UBERON:0004638;1.06e-07;18!UBERON:0001986;1.06e-07;18!UBERON:0004852;1.06e-07;18!UBERON:0004457;3.85e-07;9!UBERON:0000042;3.85e-07;9!UBERON:0002049;5.12e-07;75!UBERON:0007798;5.12e-07;75!UBERON:0001013;5.31e-07;14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,1.47e-17,68;UBERON:0007500,6.06e-17,59;UBERON:0001981,6.06e-17,59;UBERON:0004537,6.06e-17,59;UBERON:0006965,6.06e-17,59;UBERON:0002049,3.91e-14,78;UBERON:0007798,3.91e-14,78;UBERON:0000947,2.52e-13,21;UBERON:0010191,2.52e-13,21;UBERON:0001637,3.28e-13,42;UBERON:0003509,3.28e-13,42;UBERON:0004572,3.28e-13,42;UBERON:0004573,3.81e-11,33;UBERON:0004571,3.81e-11,33;UBERON:0004872,1.01e-10,83;UBERON:0004535,2.61e-09,109;UBERON:0001009,7.84e-09,112;UBERON:0003688,2.12e-08,6;UBERON:0002358,2.12e-08,6;UBERON:0003684,2.12e-08,6;UBERON:0001178,2.12e-08,6;UBERON:0004638,8.26e-08,18;UBERON:0001986,8.26e-08,18;UBERON:0004852,8.26e-08,18;UBERON:0001013,8.37e-07,14 | |||
|phase1_expression=2.18014055124668,2.5692062866918,3.94672331468719,2.00146596706261,1.78784437770915,0,2.53299878168311,1.26343974685366,1.82829939739887,0,0,0,0,0.247532705920093,0,2.01697543935533,1.20538905604795,2.19093027116212,1.95173119516203,0,0,0,1.43117993565528,0.273748850145768,0,0.305653622991805,0.656804715599566,0.393553906568396,0.393364276848904,1.53531759238885,0.154816123316076,0,0,0,0.92960640696362,0.142169232487422,1.46800219667424,0.553995408531877,0.200544447470142,0.434021741431704,0.895661896959697,0.971680998056939,0.257575567634187,0,0,0.485168122375632,0.697287110717054,0,0.619412741790207,1.1507695692886,1.0246428261164,1.18241114944293,0.344745680736619,0.645484683583826,0,0.376484679085209,0.272906150057846,0.224723484445085,0.918251677112708,0.962787081228281,0,0.989553900560148,1.19678194572979,0.852449501065388,0.580418477257168,0,0.622822248995575,0.502497330513487,0.521482918420201,0.868755378820466,1.21079900526674,0.368277635987565,0.632924774881769,0.211255286311942,0.637812899895131,0.419317291016752,0.561643155732475,0.600707571366025,0.16072558669708,1.14005097496499,0.59675003159727,0.365328307529268,0,1.09227722252426,0,2.13365111283254,3.2031678962881,0.574752439954483,1.32208974556972,0,0.569212969109448,0,1.91136614062614,1.32171328579026,0.560508562981536,0.790152254325231,0.393419540227666,0,0.411202997999018,0.167186495390678,1.30368906653436,0.946895611469467,1.94826728407911,0.668462741311041,2.3568472597987,1.55073726208535,1.08321545506006,0.768547918354051,0.520237390239513,1.15106533222573,0.276350017785848,0.869409257205157,0.741432815810302,0.267540828089713,2.09071047609954,0.566546713487831,0.766440987203842,1.37450978193052,0.253019692019503,0.318565414324097,0.651083453856419,0.950452044448374,0.752875595388864,1.4078527226986,0,3.07810427657222,0,0.201606743224732,0,1.15859523106239,0,0.670700859703636,0.12786256184353,0.722878304769133,0.50133791063589,0.144846518960824,0,0,0.189069634328136,0.221729397462564,0.175669571386252,0.196468613246569,0.364295288292542,0,0,0,0.132957960518865,0.715471872916026,0.571994910780128,0.371457501329565,1.19257444420023,1.72046919021225,2.77712401286075,0,0.838998872419812,1.6507082516404,0.417989933073621,1.55050055501597,1.77883131343355,1.67360306382335,0.805658634218294,1.52054421143703,0.976248230192678,1.10298924103761,1.62028389576352,1.16089646769304,1.34717623575702,0.225222960966644,0,0,1.64881569537367,2.63560834872127,0,0,0,1.01304409331664,2.78059279707759,1.14734648299525,0,0,0,0.24666754841716,0.622422070799533,0.269421344139376,0,0.302714855289863,0,0,0.624320153660641,0.570471821544449,0.149448680551801,0,0.161872944368132,0,0.408308342509787,0,0.413303124703062,2.37600571456411,0.247266929278557,0,0,0.168336113954066,0,0.554128230968366,0,0.919463387397059,0.150238058906597,0.340296549480063,0.538168907066586,0.85422955527427,0.211931901159562,0.600182192168805,1.03052529238439,0.772921620136887,0.930584281657949,0.168776332241266,0.292311015483596,0.252433774244115,1.10459878370759,1.93975268182574,0,0.201504196455281,0,0.966304265816484,1.36373060295417,0.860413786167011,0,0,0,0,0.504641701751257,0,1.56449532329816,0.643240938192885,0,1.39310378409594,2.88751792667834,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.768251997860379,0,0.201057944823262,0.370353780634118,0,0,1.44331342025273,0.115930404975077,0.821860859650752,0.721832238805369,0.462985512576611,0.761016608938393,0,0,0,0,0.445893486866185,0,0.335964256397719,0.850650583454319,0.0895585227028483,0.290633938513962,0.383382679165211,1.97065295158377,0.528290604079356,0,0.432359860250884,0,0,0.763976851116555,0,0,0,0,0.285826432630578,0,0,0,0.775630294546667,3.57656445851882,0,0.26593811658487,0,0,0,0,0,0,0,0.325736184293735,0,1.58390374586686,1.20575750823834,1.74306691720059,0.699810938274399,0,0,0,0,0,1.42636905040718,0.579125226670317,0.205476322550383,0.358121926479791,0.112085143993527,0.591092280605782,0.862510299438069,0.256686072559497,0,0,0,0.335032530668698,0,0.749007023947182,0,0,0,0,0.813795071099207,2.49565033836969,1.60586089917446,0.788512075169673,0.702848489956279,0.902838299183157,0,0,0,0,0.695068915744663,0,0,0.206768026122887,0.862856803274467,0.640365346820666,0,0,0,1.48864684691266,3.52962538562544,1.68396056659844,1.66580894032411,2.04682899626681,0.804269605718038,0,0.308419387605311,0.710246901252508,0.657017248110473,0,0.464841513839837,0,1.20303882181971,0.184161977871793,0.34444334449382,0.364182336013434,0.393373244878272,0,0,0,0,0.527758144464379,0,0,0.215915916102139,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0.325378394664303,0.721287081534056,0,0,0,0,0,0.193341436584244,0.154048617114644,0.307007349452259,0,0.966782203814463,0.435050081742686,0.170453254832202,0.356128142586949,0.495854746082934,0.384380134730212,1.02090169995667,0.30347334256665,0,0.31481234683064,1.3940745403212,1.23213432070436,0,0,1.29726953372744,0.143124886741991,0.744316738719335,0.316379424718726,0.5718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| |||
|short_description=p6@TRIM22 | |||
}} |
Revision as of 18:08, 10 September 2013
Short description: | p6@TRIM22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_TRIM22_5end |
Coexpression cluster: | NA |
Association with transcript: | 44bp_to_ENST00000379965, uc001mbr.2, uc009yes.2, uc009yet.1, uc010qzm.1_5end |
EntrezGene: | TRIM22 |
HGNC: | 16379 |
UniProt: | Q8IYM9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.12e-10 | 15 |
endothelial cell of vascular tree | 1.53e-09 | 24 |
blood vessel endothelial cell | 8.26e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 8.26e-08 | 18 |
aortic endothelial cell | 2.52e-07 | 6 |
adipocyte of omentum tissue | 6.40e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 1.47e-17 | 68 |
epithelial tube open at both ends | 6.06e-17 | 59 |
blood vessel | 6.06e-17 | 59 |
blood vasculature | 6.06e-17 | 59 |
vascular cord | 6.06e-17 | 59 |
vasculature | 3.91e-14 | 78 |
vascular system | 3.91e-14 | 78 |
aorta | 2.52e-13 | 21 |
aortic system | 2.52e-13 | 21 |
artery | 3.28e-13 | 42 |
arterial blood vessel | 3.28e-13 | 42 |
arterial system | 3.28e-13 | 42 |
systemic artery | 3.81e-11 | 33 |
systemic arterial system | 3.81e-11 | 33 |
splanchnic layer of lateral plate mesoderm | 1.01e-10 | 83 |
cardiovascular system | 2.61e-09 | 109 |
circulatory system | 7.84e-09 | 112 |
omentum | 2.12e-08 | 6 |
peritoneum | 2.12e-08 | 6 |
abdominal cavity | 2.12e-08 | 6 |
visceral peritoneum | 2.12e-08 | 6 |
blood vessel endothelium | 8.26e-08 | 18 |
endothelium | 8.26e-08 | 18 |
cardiovascular system endothelium | 8.26e-08 | 18 |
adipose tissue | 8.37e-07 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.