FFCP PHASE1:Hg19::chr10:100150986..100150988,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C289|description=CAGE_peak_at_chr10:100150986..100150988,+|id=chr10:100150986..100150988,+|ontology_enrichment_celltype=CL:0002541!5.50e-25!3|ontology_enrichment_celltype_v019=CL:0002541;1.22e-14;3!CL:0000349;2.21e-09;19!CL:0002537;3.35e-09;5|ontology_enrichment_celltype_v019_2=CL:0002541,1.22e-14,3;CL:0000349,2.17e-09,19;CL:0002537,3.22e-09,5|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000476!5.50e-25!3;UBERON:0000920!5.50e-25!3;UBERON:0002702!1.30e-19!1;UBERON:0002780!2.13e-15!41;UBERON:0001890!2.13e-15!41;UBERON:0006240!2.13e-15!41;UBERON:0003080!4.89e-15!42;UBERON:0001869!7.67e-14!32;UBERON:0002791!1.94e-13!33;UBERON:0002020!4.67e-13!34;UBERON:0003528!4.67e-13!34;UBERON:0001893!4.67e-13!34;UBERON:0000200!4.81e-13!6;UBERON:0002619!5.40e-13!22;UBERON:0005631!2.74e-12!14;UBERON:0000158!2.74e-12!14;UBERON:0000956!1.55e-11!25;UBERON:0000203!1.55e-11!25;UBERON:0003124!2.69e-11!7;UBERON:0001049!4.06e-11!57;UBERON:0005068!4.06e-11!57;UBERON:0006241!4.06e-11!57;UBERON:0007135!4.06e-11!57;UBERON:0002616!9.65e-11!59;UBERON:0001870!1.72e-10!2;UBERON:0001954!2.07e-10!2;UBERON:0003022!2.07e-10!2;UBERON:0002421!2.07e-10!2;UBERON:0002600!2.07e-10!2;UBERON:0003056!2.17e-10!61;UBERON:0001873!2.27e-10!2;UBERON:0010122!2.27e-10!2;UBERON:0001897!2.49e-10!2;UBERON:0000955!4.74e-09!69;UBERON:0006238!4.74e-09!69;UBERON:0001950!2.00e-08!20;UBERON:0001017!1.28e-07!82;UBERON:0000478!2.06e-07!24;UBERON:0003075!2.39e-07!86;UBERON:0007284!2.39e-07!86;UBERON:0005383!2.47e-07!3;UBERON:0005382!2.47e-07!3;UBERON:0002771!2.79e-07!3;UBERON:0005743!2.92e-07!86;UBERON:0002346!5.16e-07!90|ontology_enrichment_uberon_v019=UBERON:0002702;4.66e-21;2!UBERON:0001954;6.30e-21;2!UBERON:0003022;6.30e-21;2!UBERON:0002421;6.30e-21;2!UBERON:0002600;6.30e-21;2!UBERON:0005631;7.21e-17;10!UBERON:0000158;7.21e-17;10!UBERON:0002619;2.78e-16;22!UBERON:0003124;1.22e-14;3!UBERON:0000920;1.22e-14;3!UBERON:0001870;1.60e-14;3!UBERON:0000956;1.66e-14;25!UBERON:0000203;1.66e-14;25!UBERON:0002791;4.76e-12;32!UBERON:0001869;4.76e-12;32!UBERON:0003528;9.16e-11;34!UBERON:0002020;9.16e-11;34!UBERON:0001893;3.97e-10;34!UBERON:0002021;2.74e-09;5!UBERON:0000349;3.35e-09;5!UBERON:0002780;7.63e-09;41!UBERON:0001890;7.63e-09;41!UBERON:0001950;1.37e-08;20!UBERON:0000200;6.34e-08;6!UBERON:0000478;1.25e-07;24!UBERON:0000305;6.21e-07;7|ontology_enrichment_uberon_v019_2=UBERON:0002702,4.66e-21,2;UBERON:0001954,6.96e-21,2;UBERON:0003022,6.96e-21,2;UBERON:0002421,6.96e-21,2;UBERON:0002600,6.96e-21,2;UBERON:0002619,2.85e-16,22;UBERON:0000920,1.22e-14,3;UBERON:0001870,1.60e-14,3;UBERON:0000956,1.70e-14,25;UBERON:0000203,1.70e-14,25;UBERON:0005631,2.24e-12,14;UBERON:0000158,2.24e-12,14;UBERON:0002791,1.33e-11,32;UBERON:0001869,1.33e-11,32;UBERON:0003528,5.49e-11,34;UBERON:0002020,5.49e-11,34;UBERON:0001893,5.49e-11,34;UBERON:0002780,2.74e-09,41;UBERON:0001890,2.74e-09,41;UBERON:0003080,2.74e-09,41;UBERON:0006240,2.74e-09,41;UBERON:0002021,2.74e-09,5;UBERON:0000349,3.49e-09,5;UBERON:0001950,1.37e-08,20;UBERON:0000200,6.34e-08,6;UBERON:0000478,1.23e-07,24;UBERON:0000073,2.17e-07,53;UBERON:0002616,2.17e-07,53;UBERON:0001049,4.88e-07,56;UBERON:0005068,4.88e-07,56;UBERON:0006241,4.88e-07,56;UBERON:0007135,4.88e-07,56;UBERON:0003124,5.08e-07,7;UBERON:0000305,6.04e-07,7|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,9.8890359516895,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,0.610131324509816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08482881627925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:100150986..100150988,+}} | ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C289 | |||
|description=CAGE_peak_at_chr10:100150986..100150988,+ | |||
|id=chr10:100150986..100150988,+ | |||
|ontology_enrichment_celltype=CL:0002541!5.50e-25!3 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.22e-14;3!CL:0000349;2.21e-09;19!CL:0002537;3.35e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.22e-14,3;CL:0000349,2.17e-09,19;CL:0002537,3.22e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!5.50e-25!3;UBERON:0000920!5.50e-25!3;UBERON:0002702!1.30e-19!1;UBERON:0002780!2.13e-15!41;UBERON:0001890!2.13e-15!41;UBERON:0006240!2.13e-15!41;UBERON:0003080!4.89e-15!42;UBERON:0001869!7.67e-14!32;UBERON:0002791!1.94e-13!33;UBERON:0002020!4.67e-13!34;UBERON:0003528!4.67e-13!34;UBERON:0001893!4.67e-13!34;UBERON:0000200!4.81e-13!6;UBERON:0002619!5.40e-13!22;UBERON:0005631!2.74e-12!14;UBERON:0000158!2.74e-12!14;UBERON:0000956!1.55e-11!25;UBERON:0000203!1.55e-11!25;UBERON:0003124!2.69e-11!7;UBERON:0001049!4.06e-11!57;UBERON:0005068!4.06e-11!57;UBERON:0006241!4.06e-11!57;UBERON:0007135!4.06e-11!57;UBERON:0002616!9.65e-11!59;UBERON:0001870!1.72e-10!2;UBERON:0001954!2.07e-10!2;UBERON:0003022!2.07e-10!2;UBERON:0002421!2.07e-10!2;UBERON:0002600!2.07e-10!2;UBERON:0003056!2.17e-10!61;UBERON:0001873!2.27e-10!2;UBERON:0010122!2.27e-10!2;UBERON:0001897!2.49e-10!2;UBERON:0000955!4.74e-09!69;UBERON:0006238!4.74e-09!69;UBERON:0001950!2.00e-08!20;UBERON:0001017!1.28e-07!82;UBERON:0000478!2.06e-07!24;UBERON:0003075!2.39e-07!86;UBERON:0007284!2.39e-07!86;UBERON:0005383!2.47e-07!3;UBERON:0005382!2.47e-07!3;UBERON:0002771!2.79e-07!3;UBERON:0005743!2.92e-07!86;UBERON:0002346!5.16e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0002702;4.66e-21;2!UBERON:0001954;6.30e-21;2!UBERON:0003022;6.30e-21;2!UBERON:0002421;6.30e-21;2!UBERON:0002600;6.30e-21;2!UBERON:0005631;7.21e-17;10!UBERON:0000158;7.21e-17;10!UBERON:0002619;2.78e-16;22!UBERON:0003124;1.22e-14;3!UBERON:0000920;1.22e-14;3!UBERON:0001870;1.60e-14;3!UBERON:0000956;1.66e-14;25!UBERON:0000203;1.66e-14;25!UBERON:0002791;4.76e-12;32!UBERON:0001869;4.76e-12;32!UBERON:0003528;9.16e-11;34!UBERON:0002020;9.16e-11;34!UBERON:0001893;3.97e-10;34!UBERON:0002021;2.74e-09;5!UBERON:0000349;3.35e-09;5!UBERON:0002780;7.63e-09;41!UBERON:0001890;7.63e-09;41!UBERON:0001950;1.37e-08;20!UBERON:0000200;6.34e-08;6!UBERON:0000478;1.25e-07;24!UBERON:0000305;6.21e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002702,4.66e-21,2;UBERON:0001954,6.96e-21,2;UBERON:0003022,6.96e-21,2;UBERON:0002421,6.96e-21,2;UBERON:0002600,6.96e-21,2;UBERON:0002619,2.85e-16,22;UBERON:0000920,1.22e-14,3;UBERON:0001870,1.60e-14,3;UBERON:0000956,1.70e-14,25;UBERON:0000203,1.70e-14,25;UBERON:0005631,2.24e-12,14;UBERON:0000158,2.24e-12,14;UBERON:0002791,1.33e-11,32;UBERON:0001869,1.33e-11,32;UBERON:0003528,5.49e-11,34;UBERON:0002020,5.49e-11,34;UBERON:0001893,5.49e-11,34;UBERON:0002780,2.74e-09,41;UBERON:0001890,2.74e-09,41;UBERON:0003080,2.74e-09,41;UBERON:0006240,2.74e-09,41;UBERON:0002021,2.74e-09,5;UBERON:0000349,3.49e-09,5;UBERON:0001950,1.37e-08,20;UBERON:0000200,6.34e-08,6;UBERON:0000478,1.23e-07,24;UBERON:0000073,2.17e-07,53;UBERON:0002616,2.17e-07,53;UBERON:0001049,4.88e-07,56;UBERON:0005068,4.88e-07,56;UBERON:0006241,4.88e-07,56;UBERON:0007135,4.88e-07,56;UBERON:0003124,5.08e-07,7;UBERON:0000305,6.04e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90995587790152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0,0,0,0,0,0,0,0,0,0,0,0,9.8890359516895,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.65820453990096,0.610131324509816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.08482881627925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:100150986..100150988,+ | |||
}} |
Revision as of 11:14, 10 September 2013
Short description: | p@chr10:100150986..100150988, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:100150986..100150988, + |
Coexpression cluster: | C289_chorionic_skeletal_heart_Mast_amniotic_granulosa_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.22e-14 | 3 |
extraembryonic cell | 2.17e-09 | 19 |
amnion mesenchymal stem cell | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
middle frontal gyrus | 4.66e-21 | 2 |
Ammon's horn | 6.96e-21 | 2 |
lobe parts of cerebral cortex | 6.96e-21 | 2 |
hippocampal formation | 6.96e-21 | 2 |
limbic lobe | 6.96e-21 | 2 |
regional part of cerebral cortex | 2.85e-16 | 22 |
egg chorion | 1.22e-14 | 3 |
frontal cortex | 1.60e-14 | 3 |
cerebral cortex | 1.70e-14 | 25 |
pallium | 1.70e-14 | 25 |
extraembryonic membrane | 2.24e-12 | 14 |
membranous layer | 2.24e-12 | 14 |
regional part of telencephalon | 1.33e-11 | 32 |
cerebral hemisphere | 1.33e-11 | 32 |
brain grey matter | 5.49e-11 | 34 |
gray matter | 5.49e-11 | 34 |
telencephalon | 5.49e-11 | 34 |
regional part of forebrain | 2.74e-09 | 41 |
forebrain | 2.74e-09 | 41 |
anterior neural tube | 2.74e-09 | 41 |
future forebrain | 2.74e-09 | 41 |
occipital lobe | 2.74e-09 | 5 |
limbic system | 3.49e-09 | 5 |
neocortex | 1.37e-08 | 20 |
gyrus | 6.34e-08 | 6 |
extraembryonic structure | 1.23e-07 | 24 |
regional part of nervous system | 2.17e-07 | 53 |
regional part of brain | 2.17e-07 | 53 |
neural tube | 4.88e-07 | 56 |
neural rod | 4.88e-07 | 56 |
future spinal cord | 4.88e-07 | 56 |
neural keel | 4.88e-07 | 56 |
chorion | 5.08e-07 | 7 |
amnion | 6.04e-07 | 7 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.