FFCP PHASE1:Hg19::chr10:91461133..91461151,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding|HGNC=|TSSclassifier=S|UniProt=|association_with_transcript=25bp_to_ENST00000449882_5end|description=CAGE_peak_2_at_ENST00000449882_5end|id=chr10:91461133..91461151,-|ontology_enrichment_celltype=CL:0000542!8.64e-07!53;CL:0000051!8.64e-07!53|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.06e-13!94;UBERON:0001016!2.06e-13!94;UBERON:0001017!3.72e-13!82;UBERON:0005743!3.50e-12!86;UBERON:0001049!7.71e-12!57;UBERON:0005068!7.71e-12!57;UBERON:0006241!7.71e-12!57;UBERON:0007135!7.71e-12!57;UBERON:0000955!4.60e-10!69;UBERON:0006238!4.60e-10!69;UBERON:0002616!2.51e-09!59;UBERON:0002780!6.73e-09!41;UBERON:0001890!6.73e-09!41;UBERON:0006240!6.73e-09!41;UBERON:0002346!1.34e-08!90;UBERON:0003075!1.89e-08!86;UBERON:0007284!1.89e-08!86;UBERON:0003080!2.47e-08!42;UBERON:0002020!2.22e-07!34;UBERON:0003528!2.22e-07!34;UBERON:0000924!2.27e-07!173;UBERON:0006601!2.27e-07!173;UBERON:0001893!2.89e-07!34;UBERON:0004121!3.53e-07!169;UBERON:0002791!4.19e-07!33;UBERON:0001869!5.69e-07!32|ontology_enrichment_uberon_v019=UBERON:0003296;1.12e-10;4!UBERON:0010133;1.12e-10;4|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.24e-11,89;UBERON:0003296,5.64e-10,4;UBERON:0010133,5.64e-10,4;UBERON:0001017,2.12e-09,81;UBERON:0003075,2.43e-08,82;UBERON:0007284,2.43e-08,82;UBERON:0001049,4.86e-08,56;UBERON:0005068,4.86e-08,56;UBERON:0006241,4.86e-08,56;UBERON:0007135,4.86e-08,56;UBERON:0010371,7.25e-08,104;UBERON:0002346,1.02e-07,86;UBERON:0000073,1.52e-07,53;UBERON:0002616,1.52e-07,53;UBERON:0004121,3.86e-07,171;UBERON:0000924,3.86e-07,171;UBERON:0006601,3.86e-07,171;UBERON:0000955,8.43e-07,68;UBERON:0006238,8.43e-07,68|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0.872338524100369,0,0,0.261185628199839,0.491467873003018,0,0.218441372130172,0,0,0,0,0,0.730310090387373,0,0.861847406537515,0.408001382488506,0,0.572471974262113,0.958120975510189,0.376627918784408,0.687720651731561,0.410502947249729,0.708397031823113,0,0,0,0.919421224478927,0.30120591877825,0,2.16908161624845,0.853015394924529,0,0,0.802177789880567,0.651032612147555,0,0,0.257575567634187,0,0,0.242584061187816,0,0,0.309706370895104,0,0,0.236482229888585,0.689491361473237,0,0,0.188242339542605,0,0,0,0.641858054152187,0.639337125799041,0,0,0,0.290209238628584,0,0,0,0,0.868755378820466,0,0.368277635987565,0,0.211255286311942,0,0,0,0.150176892841506,0.32145117339416,0,0.19891667719909,0.547992461293902,0,0,0,0.426730222566507,0,0.574752439954483,0,0.954053754535364,0.569212969109448,0,0,0,0,0,1.96709770113833,1.17903228824749,2.46721798799411,0.501559486172034,0.651844533267181,0,0,1.00269411196656,0.294605907474837,0.443067789167242,1.35401931882508,0.640456598628376,0.130059347559878,0.164437904603676,0,0.289803085735052,0.593146252648242,0,1.04535523804977,0.339928028092699,0.383220493601921,0.34362744548263,0.506039384039006,0.95569624297229,0,0,0.602300476311091,0.127986611154418,1.24930726552346,0,0,1.00803371612366,1.06976078313403,0.868946423296794,0,0,0,0,0,0,0,0,1.13441780596881,1.55210578223795,0.175669571386252,0.261958150995425,0,1.11235332835329,0,0,0,0,0,0.371457501329565,0,0,0,0.56530794192401,0.838998872419812,0.550236083880135,0,0.258416759169329,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0.22452937262617,0.225222960966644,0,0,0,0,0,0,0,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0,0.933633106199299,0.269421344139376,0,0.151357427644931,0,0,0,0,0.149448680551801,0.822041490506354,0.323745888736263,0.421352420106746,0,0.122834317311768,0,0,0,0,0,0.841680569770331,0.625592599359821,0,0,0,0.150238058906597,0.226864366320042,0.179389635688862,0.213557388818567,0.423863802319124,1.20036438433761,0.206105058476878,0,0,0.843881661206331,0.194874010322397,1.7670364197088,0.184099797284599,0.646584227275248,0.355009592516614,0.302256294682921,0.508681776931463,0.386521706326594,0.818238361772504,0.286804595389004,0.853815942907168,0.132529768321485,0.348581828608555,0.518305275076852,0.756962552626885,0.36497735907583,1.56449532329816,0,1.38134921352481,0,0.721879481669586,0.118306800039844,0.337169380156203,0.241011029883482,0.110293972732394,0.217879444092406,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0.882926198829301,1.22988438543114,0.343135620597051,0.109750285408626,0,0.201057944823262,0,0,0,0,0.231860809950154,0,0,0,0.190254152234598,0,0,0.246217006087397,0.234004265139238,0,0,0.335964256397719,0.425325291727159,0.268675568108545,0.871901815541886,0,0.985326475791887,0.264145302039678,1.03664057770386,0.144119953416961,0.75745460055828,0.253991577168676,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0,0,0.87192013766656,0.22001485746285,0,0,0,0.26593811658487,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=S | |||
|UniProt= | |||
|association_with_transcript=25bp_to_ENST00000449882_5end | |||
|description=CAGE_peak_2_at_ENST00000449882_5end | |||
|id=chr10:91461133..91461151,- | |||
|ontology_enrichment_celltype=CL:0000542!8.64e-07!53;CL:0000051!8.64e-07!53 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.06e-13!94;UBERON:0001016!2.06e-13!94;UBERON:0001017!3.72e-13!82;UBERON:0005743!3.50e-12!86;UBERON:0001049!7.71e-12!57;UBERON:0005068!7.71e-12!57;UBERON:0006241!7.71e-12!57;UBERON:0007135!7.71e-12!57;UBERON:0000955!4.60e-10!69;UBERON:0006238!4.60e-10!69;UBERON:0002616!2.51e-09!59;UBERON:0002780!6.73e-09!41;UBERON:0001890!6.73e-09!41;UBERON:0006240!6.73e-09!41;UBERON:0002346!1.34e-08!90;UBERON:0003075!1.89e-08!86;UBERON:0007284!1.89e-08!86;UBERON:0003080!2.47e-08!42;UBERON:0002020!2.22e-07!34;UBERON:0003528!2.22e-07!34;UBERON:0000924!2.27e-07!173;UBERON:0006601!2.27e-07!173;UBERON:0001893!2.89e-07!34;UBERON:0004121!3.53e-07!169;UBERON:0002791!4.19e-07!33;UBERON:0001869!5.69e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;1.12e-10;4!UBERON:0010133;1.12e-10;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,6.24e-11,89;UBERON:0003296,5.64e-10,4;UBERON:0010133,5.64e-10,4;UBERON:0001017,2.12e-09,81;UBERON:0003075,2.43e-08,82;UBERON:0007284,2.43e-08,82;UBERON:0001049,4.86e-08,56;UBERON:0005068,4.86e-08,56;UBERON:0006241,4.86e-08,56;UBERON:0007135,4.86e-08,56;UBERON:0010371,7.25e-08,104;UBERON:0002346,1.02e-07,86;UBERON:0000073,1.52e-07,53;UBERON:0002616,1.52e-07,53;UBERON:0004121,3.86e-07,171;UBERON:0000924,3.86e-07,171;UBERON:0006601,3.86e-07,171;UBERON:0000955,8.43e-07,68;UBERON:0006238,8.43e-07,68 | |||
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| |||
|short_description=p2@ENST00000449882 | |||
}} |
Revision as of 14:57, 10 September 2013
Short description: | p2@ENST00000449882 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENST00000449882_5end |
Coexpression cluster: | NA |
Association with transcript: | 25bp_to_ENST00000449882_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 6.24e-11 | 89 |
gland of diencephalon | 5.64e-10 | 4 |
neuroendocrine gland | 5.64e-10 | 4 |
central nervous system | 2.12e-09 | 81 |
neural plate | 2.43e-08 | 82 |
presumptive neural plate | 2.43e-08 | 82 |
neural tube | 4.86e-08 | 56 |
neural rod | 4.86e-08 | 56 |
future spinal cord | 4.86e-08 | 56 |
neural keel | 4.86e-08 | 56 |
ecto-epithelium | 7.25e-08 | 104 |
neurectoderm | 1.02e-07 | 86 |
regional part of nervous system | 1.52e-07 | 53 |
regional part of brain | 1.52e-07 | 53 |
ectoderm-derived structure | 3.86e-07 | 171 |
ectoderm | 3.86e-07 | 171 |
presumptive ectoderm | 3.86e-07 | 171 |
brain | 8.43e-07 | 68 |
future brain | 8.43e-07 | 68 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.