FFCP PHASE1:Hg19::chr10:90519754..90519788,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=643418|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=23452|TSSclassifier=N|UniProt=|association_with_transcript=-163bp_to_ENST00000491766_5end|coexpression_cluster_id=C0|description=CAGE_peak_1_at_LIPN_5end|id=chr10:90519754..90519788,+|ontology_enrichment_celltype=CL:0002057!5.89e-50!42;CL:0000860!2.11e-45!45;CL:0000738!4.99e-39!140;CL:0000766!2.62e-38!76;CL:0002009!7.91e-33!65;CL:0000037!9.73e-33!172;CL:0000566!9.73e-33!172;CL:0002194!4.41e-31!63;CL:0000576!4.41e-31!63;CL:0000040!4.41e-31!63;CL:0000559!4.41e-31!63;CL:0000557!5.09e-31!71;CL:0002087!7.61e-31!119;CL:0002032!8.17e-30!165;CL:0000837!8.17e-30!165;CL:0000988!2.92e-29!182;CL:0002031!3.31e-29!124;CL:0000839!1.18e-28!70;CL:0000763!2.10e-28!112;CL:0000049!2.10e-28!112;CL:0002393!2.93e-11!9;CL:0002397!2.93e-11!9;CL:0000094!1.43e-10!8;CL:0000081!4.77e-07!11|ontology_enrichment_celltype_v019=CL:0000860;1.75e-66;33!CL:0002057;1.75e-66;33!CL:0000576;1.76e-48;48!CL:0000473;1.18e-45;39!CL:0000234;1.18e-45;39!CL:0000766;3.08e-34;69!CL:0000094;2.53e-18;8!CL:0002087;3.35e-17;104!CL:0000763;7.57e-15;100!CL:0002393;1.58e-13;6!CL:0002397;1.58e-13;6!CL:0000081;7.27e-13;11!CL:0000738;3.68e-11;136!CL:0000775;3.50e-08;3!CL:0000988;7.91e-08;177!CL:0000875;8.84e-08;3!CL:0002396;8.84e-08;3!CL:0000767;2.48e-07;3!CL:0000226;3.75e-07;3!CL:0000842;3.75e-07;3|ontology_enrichment_celltype_v019_2=CL:0000860,3.41e-92,42;CL:0002057,3.41e-92,42;CL:0000473,5.47e-79,48;CL:0000234,5.47e-79,48;CL:0000766,1.55e-73,72;CL:0002009,3.78e-64,61;CL:0002194,1.70e-63,59;CL:0000576,1.70e-63,59;CL:0000040,1.70e-63,59;CL:0000559,1.70e-63,59;CL:0000557,2.83e-57,67;CL:0000839,1.88e-55,66;CL:0000738,3.16e-52,136;CL:0000763,4.26e-48,108;CL:0000049,4.26e-48,108;CL:0002087,1.14e-42,115;CL:0000037,1.89e-40,168;CL:0000988,1.63e-37,177;CL:0002031,8.66e-37,120;CL:0002032,1.13e-36,161;CL:0000837,1.13e-36,161;CL:0002393,1.29e-19,9;CL:0002397,1.29e-19,9;CL:0000094,2.48e-18,8;CL:0000081,7.16e-13,11;CL:0000134,1.95e-10,354;CL:0002320,6.23e-10,361;CL:0000775,3.50e-08,3;CL:0000219,3.53e-08,386;CL:0000875,8.84e-08,3;CL:0002396,8.84e-08,3;CL:0000767,2.42e-07,3;CL:0000226,3.75e-07,3;CL:0000842,3.75e-07,3;CL:0000034,3.91e-07,441|ontology_enrichment_development_v019=CL:0002057;1.33e-65;42!CL:0000049;1.12e-14;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!9.36e-35!102;UBERON:0003061!9.36e-35!102;UBERON:0002193!7.51e-32!112;UBERON:0002371!1.82e-25!80;UBERON:0001474!1.93e-22!86;UBERON:0004765!5.49e-19!101;UBERON:0001434!5.49e-19!101;UBERON:0002405!8.46e-18!115;UBERON:0007023!1.33e-10!115;UBERON:0003081!1.86e-10!216;UBERON:0000178!1.04e-09!15;UBERON:0000179!1.04e-09!15;UBERON:0000463!1.04e-09!15;UBERON:0002204!2.53e-07!167|ontology_enrichment_uberon_v019=UBERON:0000178;7.51e-18;15!UBERON:0000179;7.51e-18;15!UBERON:0000463;7.51e-18;15!UBERON:0002390;8.83e-08;32|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.36e-62,98;UBERON:0003061,1.36e-62,98;UBERON:0002193,1.79e-57,108;UBERON:0002371,5.55e-49,76;UBERON:0001474,1.85e-44,82;UBERON:0002405,2.13e-41,93;UBERON:0004765,2.30e-39,90;UBERON:0001434,3.82e-34,100;UBERON:0003081,3.90e-24,203;UBERON:0000178,7.52e-18,15;UBERON:0000179,7.52e-18,15;UBERON:0000463,7.52e-18,15;UBERON:0002204,2.44e-16,167;UBERON:0000926,1.03e-10,315;UBERON:0004120,1.03e-10,315;UBERON:0006603,1.03e-10,315;UBERON:0002384,3.00e-09,371|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.71559220997,21.8782756915411,18.1134864279809,0,0,0,0.92960640696362,0,0,45.9816189081458,21.8593447742454,27.9944023223449,0,0,0,58.3046937506054,39.676974087325,25.2287423635329,121.327957264767,82.644745492387,154.233772705762,104.144646020618,78.6413369044339,101.92384108198,464.027686271489,338.233974197925,338.566216485854,145.134843787348,96.3358709704196,137.755495964837,435.863462736165,330.556897888376,391.274320989013,22.7597397128834,34.9061400837856,20.885012776102,231.58697242561,101.561955219714,117.713405060164,138.689263221722,133.499627115572,143.344637505377,148.322878145175,186.348483809708,175.32016264225,62.5315647483348,42.5208599930087,40.2544599376082,34.709547024267,28.0830789613617,33.4309220329927,59.8526761856622,57.0890863561389,61.7404839724463,0,0,0,0.426730222566507,0.400395987036012,0.574752439954483,0.661044872784862,0,0,2.93618594685469,0.382273228125229,2.64342657158052,12.3311883855938,0.526768169550154,0.196709770113833,0.393010762749165,0.411202997999018,2.84217042164153,2.28145586643513,0.473447805734733,0,0.445641827540694,0.883817722424512,0.221533894583621,1.35401931882508,1.28091319725675,1.56071217071854,0.164437904603676,0,0,0,0,0,0.339928028092699,0,0,0.253019692019503,0.637130828648193,0,0,1.50575119077773,0.511946444617674,2.49861453104692,1.18388626022008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0,0,2.8618874916641,2.28797964312051,0.742915002659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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=643418 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=23452 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-163bp_to_ENST00000491766_5end | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_LIPN_5end | |||
|id=chr10:90519754..90519788,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.89e-50!42;CL:0000860!2.11e-45!45;CL:0000738!4.99e-39!140;CL:0000766!2.62e-38!76;CL:0002009!7.91e-33!65;CL:0000037!9.73e-33!172;CL:0000566!9.73e-33!172;CL:0002194!4.41e-31!63;CL:0000576!4.41e-31!63;CL:0000040!4.41e-31!63;CL:0000559!4.41e-31!63;CL:0000557!5.09e-31!71;CL:0002087!7.61e-31!119;CL:0002032!8.17e-30!165;CL:0000837!8.17e-30!165;CL:0000988!2.92e-29!182;CL:0002031!3.31e-29!124;CL:0000839!1.18e-28!70;CL:0000763!2.10e-28!112;CL:0000049!2.10e-28!112;CL:0002393!2.93e-11!9;CL:0002397!2.93e-11!9;CL:0000094!1.43e-10!8;CL:0000081!4.77e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.75e-66;33!CL:0002057;1.75e-66;33!CL:0000576;1.76e-48;48!CL:0000473;1.18e-45;39!CL:0000234;1.18e-45;39!CL:0000766;3.08e-34;69!CL:0000094;2.53e-18;8!CL:0002087;3.35e-17;104!CL:0000763;7.57e-15;100!CL:0002393;1.58e-13;6!CL:0002397;1.58e-13;6!CL:0000081;7.27e-13;11!CL:0000738;3.68e-11;136!CL:0000775;3.50e-08;3!CL:0000988;7.91e-08;177!CL:0000875;8.84e-08;3!CL:0002396;8.84e-08;3!CL:0000767;2.48e-07;3!CL:0000226;3.75e-07;3!CL:0000842;3.75e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.41e-92,42;CL:0002057,3.41e-92,42;CL:0000473,5.47e-79,48;CL:0000234,5.47e-79,48;CL:0000766,1.55e-73,72;CL:0002009,3.78e-64,61;CL:0002194,1.70e-63,59;CL:0000576,1.70e-63,59;CL:0000040,1.70e-63,59;CL:0000559,1.70e-63,59;CL:0000557,2.83e-57,67;CL:0000839,1.88e-55,66;CL:0000738,3.16e-52,136;CL:0000763,4.26e-48,108;CL:0000049,4.26e-48,108;CL:0002087,1.14e-42,115;CL:0000037,1.89e-40,168;CL:0000988,1.63e-37,177;CL:0002031,8.66e-37,120;CL:0002032,1.13e-36,161;CL:0000837,1.13e-36,161;CL:0002393,1.29e-19,9;CL:0002397,1.29e-19,9;CL:0000094,2.48e-18,8;CL:0000081,7.16e-13,11;CL:0000134,1.95e-10,354;CL:0002320,6.23e-10,361;CL:0000775,3.50e-08,3;CL:0000219,3.53e-08,386;CL:0000875,8.84e-08,3;CL:0002396,8.84e-08,3;CL:0000767,2.42e-07,3;CL:0000226,3.75e-07,3;CL:0000842,3.75e-07,3;CL:0000034,3.91e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.33e-65;42!CL:0000049;1.12e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!9.36e-35!102;UBERON:0003061!9.36e-35!102;UBERON:0002193!7.51e-32!112;UBERON:0002371!1.82e-25!80;UBERON:0001474!1.93e-22!86;UBERON:0004765!5.49e-19!101;UBERON:0001434!5.49e-19!101;UBERON:0002405!8.46e-18!115;UBERON:0007023!1.33e-10!115;UBERON:0003081!1.86e-10!216;UBERON:0000178!1.04e-09!15;UBERON:0000179!1.04e-09!15;UBERON:0000463!1.04e-09!15;UBERON:0002204!2.53e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;7.51e-18;15!UBERON:0000179;7.51e-18;15!UBERON:0000463;7.51e-18;15!UBERON:0002390;8.83e-08;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.36e-62,98;UBERON:0003061,1.36e-62,98;UBERON:0002193,1.79e-57,108;UBERON:0002371,5.55e-49,76;UBERON:0001474,1.85e-44,82;UBERON:0002405,2.13e-41,93;UBERON:0004765,2.30e-39,90;UBERON:0001434,3.82e-34,100;UBERON:0003081,3.90e-24,203;UBERON:0000178,7.52e-18,15;UBERON:0000179,7.52e-18,15;UBERON:0000463,7.52e-18,15;UBERON:0002204,2.44e-16,167;UBERON:0000926,1.03e-10,315;UBERON:0004120,1.03e-10,315;UBERON:0006603,1.03e-10,315;UBERON:0002384,3.00e-09,371 | |||
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|short_description=p1@LIPN | |||
}} |
Revision as of 14:50, 10 September 2013
Short description: | p1@LIPN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_LIPN_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -163bp_to_ENST00000491766_5end |
EntrezGene: | LIPN |
HGNC: | 23452 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.36e-62 | 98 |
blood island | 1.36e-62 | 98 |
hemolymphoid system | 1.79e-57 | 108 |
bone marrow | 5.55e-49 | 76 |
bone element | 1.85e-44 | 82 |
immune system | 2.13e-41 | 93 |
skeletal element | 2.30e-39 | 90 |
skeletal system | 3.82e-34 | 100 |
lateral plate mesoderm | 3.90e-24 | 203 |
blood | 7.52e-18 | 15 |
haemolymphatic fluid | 7.52e-18 | 15 |
organism substance | 7.52e-18 | 15 |
musculoskeletal system | 2.44e-16 | 167 |
mesoderm | 1.03e-10 | 315 |
mesoderm-derived structure | 1.03e-10 | 315 |
presumptive mesoderm | 1.03e-10 | 315 |
connective tissue | 3.00e-09 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.