FFCP PHASE1:Hg19::chr10:54532550..54532579,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C5|description=CAGE_peak_at_chr10:54532550..54532579,-|id=chr10:54532550..54532579,-|ontology_enrichment_celltype=CL:0000181!1.39e-16!12;CL:0000417!1.39e-16!12;CL:0000668!1.39e-16!12;CL:0000414!1.39e-16!12;CL:0000412!1.39e-16!12;CL:0000182!1.39e-16!12;CL:0000453!1.10e-10!5|ontology_enrichment_celltype_v019=CL:0000182;1.32e-15;12|ontology_enrichment_celltype_v019_2=CL:0000182,1.29e-15,12|ontology_enrichment_development_v019=UBERON:0004161;3.20e-08;11!UBERON:0009497;4.32e-07;13|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005057!4.09e-28!26;UBERON:0002107!4.36e-18!19;UBERON:0006925!4.36e-18!19;UBERON:0008836!4.36e-18!19;UBERON:0008835!1.90e-15!22;UBERON:0003894!1.90e-15!22;UBERON:0009854!1.01e-14!23;UBERON:0002368!3.87e-14!35;UBERON:0007499!1.92e-13!25;UBERON:0009497!1.92e-13!25;UBERON:0000015!1.92e-13!25;UBERON:0002423!1.92e-13!25;UBERON:0006235!1.92e-13!25;UBERON:0004161!1.92e-13!25;UBERON:0009856!7.08e-13!26;UBERON:0003929!2.27e-12!54;UBERON:0005172!3.34e-12!55;UBERON:0005173!3.34e-12!55;UBERON:0004177!5.93e-12!7;UBERON:0002417!9.10e-11!61;UBERON:0000916!9.10e-11!61;UBERON:0002365!1.35e-10!31;UBERON:0002330!1.35e-10!31;UBERON:0000949!1.37e-10!45;UBERON:0002530!2.82e-09!59;UBERON:0001041!5.14e-08!98;UBERON:0002106!7.76e-08!3;UBERON:0004854!7.76e-08!3;UBERON:0009034!7.76e-08!3;UBERON:0002095!7.76e-08!3;UBERON:0004782!7.76e-08!3;UBERON:0003281!7.76e-08!3;UBERON:0009664!7.76e-08!3;UBERON:0002296!7.76e-08!3;UBERON:0005602!7.76e-08!3;UBERON:0001179!7.76e-08!3;UBERON:0006293!7.76e-08!3;UBERON:0005911!2.38e-07!82;UBERON:0004921!2.53e-07!129;UBERON:0004185!2.53e-07!129|ontology_enrichment_uberon_v019=UBERON:0002107;2.72e-26;19!UBERON:0006925;2.72e-26;19!UBERON:0002423;4.78e-20;25!UBERON:0002365;3.57e-16;31!UBERON:0002330;3.57e-16;31!UBERON:0002368;5.36e-14;33!UBERON:0000949;3.21e-10;43!UBERON:0005172;6.93e-10;52!UBERON:0005173;6.93e-10;52!UBERON:0002417;7.17e-08;58!UBERON:0000916;7.17e-08;58|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.58e-26,19;UBERON:0006925,2.58e-26,19;UBERON:0008836,2.58e-26,19;UBERON:0008835,9.15e-23,22;UBERON:0003894,9.15e-23,22;UBERON:0009854,8.70e-22,23;UBERON:0007499,4.60e-20,25;UBERON:0009497,4.60e-20,25;UBERON:0000015,4.60e-20,25;UBERON:0002423,4.60e-20,25;UBERON:0006235,4.60e-20,25;UBERON:0004161,4.60e-20,25;UBERON:0009856,2.66e-19,26;UBERON:0002365,3.19e-16,31;UBERON:0002330,3.19e-16,31;UBERON:0002368,2.17e-14,35;UBERON:0005172,3.33e-13,54;UBERON:0005173,3.33e-13,54;UBERON:0002417,7.07e-12,60;UBERON:0000916,7.07e-12,60;UBERON:0000949,3.18e-11,45;UBERON:0003929,2.27e-09,54;UBERON:0002530,1.40e-08,59;UBERON:0005177,5.32e-07,101|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.89694817844431,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,70.9828195002253,67.8150779507562,37.2197641209285,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,74.7047334445986,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,67.5952489577274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0,0.522109747527277,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.787831823072237,0.576911008668165,0.674035438541849,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,79.4313106535207,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33832370607266,0.797189041880179,0.490696182767533,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0,0,0,3.45484145949794,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr10:54532550..54532579,- | |||
|id=chr10:54532550..54532579,- | |||
|ontology_enrichment_celltype=CL:0000181!1.39e-16!12;CL:0000417!1.39e-16!12;CL:0000668!1.39e-16!12;CL:0000414!1.39e-16!12;CL:0000412!1.39e-16!12;CL:0000182!1.39e-16!12;CL:0000453!1.10e-10!5 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.32e-15;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.29e-15,12 | |||
|ontology_enrichment_development_v019=UBERON:0004161;3.20e-08;11!UBERON:0009497;4.32e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!4.09e-28!26;UBERON:0002107!4.36e-18!19;UBERON:0006925!4.36e-18!19;UBERON:0008836!4.36e-18!19;UBERON:0008835!1.90e-15!22;UBERON:0003894!1.90e-15!22;UBERON:0009854!1.01e-14!23;UBERON:0002368!3.87e-14!35;UBERON:0007499!1.92e-13!25;UBERON:0009497!1.92e-13!25;UBERON:0000015!1.92e-13!25;UBERON:0002423!1.92e-13!25;UBERON:0006235!1.92e-13!25;UBERON:0004161!1.92e-13!25;UBERON:0009856!7.08e-13!26;UBERON:0003929!2.27e-12!54;UBERON:0005172!3.34e-12!55;UBERON:0005173!3.34e-12!55;UBERON:0004177!5.93e-12!7;UBERON:0002417!9.10e-11!61;UBERON:0000916!9.10e-11!61;UBERON:0002365!1.35e-10!31;UBERON:0002330!1.35e-10!31;UBERON:0000949!1.37e-10!45;UBERON:0002530!2.82e-09!59;UBERON:0001041!5.14e-08!98;UBERON:0002106!7.76e-08!3;UBERON:0004854!7.76e-08!3;UBERON:0009034!7.76e-08!3;UBERON:0002095!7.76e-08!3;UBERON:0004782!7.76e-08!3;UBERON:0003281!7.76e-08!3;UBERON:0009664!7.76e-08!3;UBERON:0002296!7.76e-08!3;UBERON:0005602!7.76e-08!3;UBERON:0001179!7.76e-08!3;UBERON:0006293!7.76e-08!3;UBERON:0005911!2.38e-07!82;UBERON:0004921!2.53e-07!129;UBERON:0004185!2.53e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.72e-26;19!UBERON:0006925;2.72e-26;19!UBERON:0002423;4.78e-20;25!UBERON:0002365;3.57e-16;31!UBERON:0002330;3.57e-16;31!UBERON:0002368;5.36e-14;33!UBERON:0000949;3.21e-10;43!UBERON:0005172;6.93e-10;52!UBERON:0005173;6.93e-10;52!UBERON:0002417;7.17e-08;58!UBERON:0000916;7.17e-08;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.58e-26,19;UBERON:0006925,2.58e-26,19;UBERON:0008836,2.58e-26,19;UBERON:0008835,9.15e-23,22;UBERON:0003894,9.15e-23,22;UBERON:0009854,8.70e-22,23;UBERON:0007499,4.60e-20,25;UBERON:0009497,4.60e-20,25;UBERON:0000015,4.60e-20,25;UBERON:0002423,4.60e-20,25;UBERON:0006235,4.60e-20,25;UBERON:0004161,4.60e-20,25;UBERON:0009856,2.66e-19,26;UBERON:0002365,3.19e-16,31;UBERON:0002330,3.19e-16,31;UBERON:0002368,2.17e-14,35;UBERON:0005172,3.33e-13,54;UBERON:0005173,3.33e-13,54;UBERON:0002417,7.07e-12,60;UBERON:0000916,7.07e-12,60;UBERON:0000949,3.18e-11,45;UBERON:0003929,2.27e-09,54;UBERON:0002530,1.40e-08,59;UBERON:0005177,5.32e-07,101 | |||
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|short_description=p@chr10:54532550..54532579,- | |||
}} |
Revision as of 13:40, 10 September 2013
Short description: | p@chr10:54532550..54532579, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:54532550..54532579, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.29e-15 | 12 |
Ontology term | p-value | n |
---|---|---|
liver | 2.58e-26 | 19 |
digestive gland | 2.58e-26 | 19 |
liver bud | 2.58e-26 | 19 |
hepatic diverticulum | 9.15e-23 | 22 |
liver primordium | 9.15e-23 | 22 |
digestive tract diverticulum | 8.70e-22 | 23 |
epithelial sac | 4.60e-20 | 25 |
epithelium of foregut-midgut junction | 4.60e-20 | 25 |
anatomical boundary | 4.60e-20 | 25 |
hepatobiliary system | 4.60e-20 | 25 |
foregut-midgut junction | 4.60e-20 | 25 |
septum transversum | 4.60e-20 | 25 |
sac | 2.66e-19 | 26 |
exocrine gland | 3.19e-16 | 31 |
exocrine system | 3.19e-16 | 31 |
endocrine gland | 2.17e-14 | 35 |
abdomen element | 3.33e-13 | 54 |
abdominal segment element | 3.33e-13 | 54 |
abdominal segment of trunk | 7.07e-12 | 60 |
abdomen | 7.07e-12 | 60 |
endocrine system | 3.18e-11 | 45 |
gut epithelium | 2.27e-09 | 54 |
gland | 1.40e-08 | 59 |
trunk region element | 5.32e-07 | 101 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.